RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LINC00846Q9NV44 126 aa19.18■□□□□ 0.66
CBX4-201ENST00000269397 H0YGX0 51 aa19.17■□□□□ 0.66
CBX4-201ENST00000269397 UQCRQO14949 82 aa19.17■□□□□ 0.66
CBX4-201ENST00000269397 DEFB130BP0DP73 79 aa19.17■□□□□ 0.66
CBX4-201ENST00000269397 DEFB130AP0DP74 79 aa19.17■□□□□ 0.66
CBX4-201ENST00000269397 ACANP16112 2415 aa19.16■□□□□ 0.66
CBX4-201ENST00000269397 BBC3Q96PG8 261 aaPredicted RBP19.16■□□□□ 0.66
CBX4-201ENST00000269397 LINC00959A0A1B0GUT2 108 aa19.15■□□□□ 0.66
CBX4-201ENST00000269397 CSNK1G2-AS1Q8NCQ2 148 aa19.15■□□□□ 0.66
CBX4-201ENST00000269397 PRR3P79522 188 aaKnown RBP19.13■□□□□ 0.65
CBX4-201ENST00000269397 LINC00526Q96FQ7 95 aa19.13■□□□□ 0.65
CBX4-201ENST00000269397 C19orf73Q9NVV2 129 aa19.13■□□□□ 0.65
CBX4-201ENST00000269397 A0A087WVE0 104 aa19.11■□□□□ 0.65
CBX4-201ENST00000269397 A0A096LPF7 62 aa19.1■□□□□ 0.65
CBX4-201ENST00000269397 COX7CP15954 63 aa19.09■□□□□ 0.65
CBX4-201ENST00000269397 KRTAP1-3Q8IUG1 177 aa19.09■□□□□ 0.65
CBX4-201ENST00000269397 C2orf48Q96LS8 159 aa19.09■□□□□ 0.65
CBX4-201ENST00000269397 OBSCN-AS1Q96MR7 158 aa19.09■□□□□ 0.65
CBX4-201ENST00000269397 TMEM86BQ8N661 226 aa19.08■□□□□ 0.64
CBX4-201ENST00000269397 HIST1H4AP62805 103 aaKnown RBP19.07■□□□□ 0.64
CBX4-201ENST00000269397 WFDC11Q8NEX6 87 aa19.06■□□□□ 0.64
CBX4-201ENST00000269397 GYPEP15421 78 aa19.05■□□□□ 0.64
CBX4-201ENST00000269397 SS18Q15532 418 aa19.05■□□□□ 0.64
CBX4-201ENST00000269397 IGLV1-51P01701 117 aa19.04■□□□□ 0.64
CBX4-201ENST00000269397 ORMDL1Q9P0S3 153 aa19.04■□□□□ 0.64
CBX4-201ENST00000269397 LINC01006Q8NI28 216 aa19.04■□□□□ 0.64
CBX4-201ENST00000269397 CYSTM1Q9H1C7 97 aa19.03■□□□□ 0.64
CBX4-201ENST00000269397 hADV29S1A0JD25 119 aa19.03■□□□□ 0.64
CBX4-201ENST00000269397 ATOX1O00244 68 aa19.03■□□□□ 0.64
CBX4-201ENST00000269397 A0A1B0GX51 115 aa19.02■□□□□ 0.63
CBX4-201ENST00000269397 LOC107984640A0A0U1RRK4 108 aa19.01■□□□□ 0.63
CBX4-201ENST00000269397 LY6G6DO95868 133 aa19.01■□□□□ 0.63
CBX4-201ENST00000269397 CMC4P56277 68 aaPredicted RBP19.01■□□□□ 0.63
CBX4-201ENST00000269397 RPL18AQ02543 176 aaKnown RBP19■□□□□ 0.63
CBX4-201ENST00000269397 Q6JHZ5 121 aa19■□□□□ 0.63
CBX4-201ENST00000269397 NANOS2P60321 138 aaKnown RBP18.99■□□□□ 0.63
CBX4-201ENST00000269397 LINC01561Q8N1V8 128 aa18.98■□□□□ 0.63
CBX4-201ENST00000269397 C9orf116Q5BN46 136 aaPredicted RBP18.97■□□□□ 0.63
CBX4-201ENST00000269397 IGLV10-54A0A075B6I4 117 aa18.96■□□□□ 0.63
CBX4-201ENST00000269397 RNASE1P07998 156 aaKnown RBP18.96■□□□□ 0.63
CBX4-201ENST00000269397 Q8IZM0 81 aa18.96■□□□□ 0.63
CBX4-201ENST00000269397 Q8N3U1 123 aa18.96■□□□□ 0.63
CBX4-201ENST00000269397 CRYGAP11844 174 aa18.94■□□□□ 0.62
CBX4-201ENST00000269397 WFDC9Q8NEX5 89 aa18.94■□□□□ 0.62
CBX4-201ENST00000269397 ZNF843Q8N446 348 aa18.94■□□□□ 0.62
CBX4-201ENST00000269397 CCKP06307 115 aa18.93■□□□□ 0.62
CBX4-201ENST00000269397 Q8N814 137 aa18.93■□□□□ 0.62
CBX4-201ENST00000269397 LINC00269Q8N2A0 174 aa18.92■□□□□ 0.62
CBX4-201ENST00000269397 USP17L23D6RBM5 183 aa18.9■□□□□ 0.62
CBX4-201ENST00000269397 HILS1P60008 231 aa18.9■□□□□ 0.62
CBX4-201ENST00000269397 CFAP161Q6P656 301 aa18.9■□□□□ 0.62
CBX4-201ENST00000269397 A0A1B0GUV1 79 aa18.89■□□□□ 0.61
CBX4-201ENST00000269397 Q8NDZ9 215 aa18.88■□□□□ 0.61
CBX4-201ENST00000269397 KIAA0087Q14695 138 aa18.87■□□□□ 0.61
CBX4-201ENST00000269397 DEFB4AO15263 64 aa18.87■□□□□ 0.61
CBX4-201ENST00000269397 KIR2DL5BQ8NHK3 375 aa18.87■□□□□ 0.61
CBX4-201ENST00000269397 VWFP04275 2813 aa18.86■□□□□ 0.61
CBX4-201ENST00000269397 SERP2Q8N6R1 65 aa18.86■□□□□ 0.61
CBX4-201ENST00000269397 C6orf99Q4VX62 202 aa18.85■□□□□ 0.61
CBX4-201ENST00000269397 LINC00167Q96N53 147 aa18.85■□□□□ 0.61
CBX4-201ENST00000269397 CHCHD10Q8WYQ3 142 aaPredicted RBP18.84■□□□□ 0.61
CBX4-201ENST00000269397 PRO0255Q9UI72 69 aa18.84■□□□□ 0.61
CBX4-201ENST00000269397 ANGP03950 147 aaKnown RBP18.83■□□□□ 0.6
CBX4-201ENST00000269397 TMEM256-PLSCR3K7ERE1 68 aa18.82■□□□□ 0.6
CBX4-201ENST00000269397 JMJD7-PLA2G4BH0Y9G9 81 aa18.82■□□□□ 0.6
CBX4-201ENST00000269397 FAM19A1Q7Z5A9 133 aa18.81■□□□□ 0.6
CBX4-201ENST00000269397 LINC00612Q8N6U2 182 aa18.81■□□□□ 0.6
CBX4-201ENST00000269397 X6R8D5 127 aa18.81■□□□□ 0.6
CBX4-201ENST00000269397 CD164L2Q6UWJ8 174 aa18.8■□□□□ 0.6
CBX4-201ENST00000269397 UPK3BQ9BT76 320 aa18.8■□□□□ 0.6
CBX4-201ENST00000269397 TRAV23DV6A0A075B6W5 121 aa18.79■□□□□ 0.6
CBX4-201ENST00000269397 J3KT08 172 aa18.79■□□□□ 0.6
CBX4-201ENST00000269397 ENHOQ6UWT2 76 aa18.79■□□□□ 0.6
CBX4-201ENST00000269397 C16orf95Q9H693 158 aa18.78■□□□□ 0.6
CBX4-201ENST00000269397 ITPR2Q14571 2701 aa18.78■□□□□ 0.6
CBX4-201ENST00000269397 NDUFC2O95298 119 aa18.77■□□□□ 0.6
CBX4-201ENST00000269397 REG3AQ06141 175 aa18.77■□□□□ 0.6
CBX4-201ENST00000269397 C6orf223Q8N319 242 aa18.77■□□□□ 0.6
CBX4-201ENST00000269397 S100A7L2Q5SY68 101 aa18.77■□□□□ 0.6
CBX4-201ENST00000269397 HIVEP2P31629 2446 aa18.77■□□□□ 0.59
CBX4-201ENST00000269397 LINC00482Q8N8I6 264 aa18.77■□□□□ 0.59
CBX4-201ENST00000269397 C10orf25Q5T742 122 aa18.76■□□□□ 0.59
CBX4-201ENST00000269397 COX17Q14061 63 aa18.75■□□□□ 0.59
CBX4-201ENST00000269397 FAM19A5Q7Z5A7 132 aaPredicted RBP18.75■□□□□ 0.59
CBX4-201ENST00000269397 KRTAP1-1Q07627 177 aa18.74■□□□□ 0.59
CBX4-201ENST00000269397 TENM4Q6N022 2769 aa18.73■□□□□ 0.59
CBX4-201ENST00000269397 ANK3Q12955 4377 aaKnown RBP18.73■□□□□ 0.59
CBX4-201ENST00000269397 UNQ6190/PRO20217Q6UXQ8 127 aa18.73■□□□□ 0.59
CBX4-201ENST00000269397 GHRHP01286 108 aa18.72■□□□□ 0.59
CBX4-201ENST00000269397 PDZD2O15018 2839 aa18.71■□□□□ 0.59
CBX4-201ENST00000269397 DSCR8Q96T75 97 aa18.71■□□□□ 0.59
CBX4-201ENST00000269397 LINC00575Q6W349 94 aa18.7■□□□□ 0.58
CBX4-201ENST00000269397 SPATA3Q8NHX4 192 aa18.7■□□□□ 0.58
CBX4-201ENST00000269397 IGHV4-28A0A0C4DH34 117 aa18.69■□□□□ 0.58
CBX4-201ENST00000269397 M0R2N4 97 aa18.69■□□□□ 0.58
CBX4-201ENST00000269397 DEFB135Q30KP9 77 aa18.69■□□□□ 0.58
CBX4-201ENST00000269397 KRTAP10-3P60369 221 aa18.68■□□□□ 0.58
CBX4-201ENST00000269397 UBL5Q9BZL1 73 aa18.68■□□□□ 0.58
CBX4-201ENST00000269397 LAMTOR3Q9UHA4 124 aa18.67■□□□□ 0.58
CBX4-201ENST00000269397 TMEM258P61165 79 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms