RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 C22orf24Q9Y442 160 aa13.29□□□□□ -0.28
CPNE7-201ENST00000268720 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
CPNE7-201ENST00000268720 PRR3P79522 188 aaKnown RBP13.29□□□□□ -0.28
CPNE7-201ENST00000268720 COX7B2Q8TF08 81 aa13.29□□□□□ -0.28
CPNE7-201ENST00000268720 FAM240AA0A1B0GVK7 77 aa13.28□□□□□ -0.28
CPNE7-201ENST00000268720 HERV-K104P63124 156 aa13.28□□□□□ -0.28
CPNE7-201ENST00000268720 C9orf129Q5T035 196 aaKnown RBP13.28□□□□□ -0.28
CPNE7-201ENST00000268720 IGKV2-28A0A075B6P5 120 aa13.27□□□□□ -0.28
CPNE7-201ENST00000268720 IGKV2D-28P01615 120 aa13.27□□□□□ -0.28
CPNE7-201ENST00000268720 X6R8D5 127 aa13.27□□□□□ -0.29
CPNE7-201ENST00000268720 GYPEP15421 78 aa13.26□□□□□ -0.29
CPNE7-201ENST00000268720 SND1-IT1Q9HBX3 110 aa13.26□□□□□ -0.29
CPNE7-201ENST00000268720 SLPIP03973 132 aa13.26□□□□□ -0.29
CPNE7-201ENST00000268720 A0A087WYN8 130 aa13.25□□□□□ -0.29
CPNE7-201ENST00000268720 CRPP02741 224 aa13.25□□□□□ -0.29
CPNE7-201ENST00000268720 OR13C6PQ8NH95 151 aa13.24□□□□□ -0.29
CPNE7-201ENST00000268720 LINC00526Q96FQ7 95 aa13.24□□□□□ -0.29
CPNE7-201ENST00000268720 TRACP01848 142 aa13.24□□□□□ -0.29
CPNE7-201ENST00000268720 KIR2DL5BQ8NHK3 375 aa13.23□□□□□ -0.29
CPNE7-201ENST00000268720 MRPL23Q16540 153 aaKnown RBP13.23□□□□□ -0.29
CPNE7-201ENST00000268720 DEFB135Q30KP9 77 aa13.22□□□□□ -0.29
CPNE7-201ENST00000268720 SMIM11BQ8TCY0 68 aa13.22□□□□□ -0.29
CPNE7-201ENST00000268720 CCL18P55774 89 aa13.22□□□□□ -0.29
CPNE7-201ENST00000268720 GAGE2AQ6NT46 116 aa13.22□□□□□ -0.29
CPNE7-201ENST00000268720 LINC00612Q8N6U2 182 aa13.22□□□□□ -0.29
CPNE7-201ENST00000268720 ANK2Q01484 3957 aa13.22□□□□□ -0.29
CPNE7-201ENST00000268720 FBN1P35555 2871 aaKnown RBP13.21□□□□□ -0.29
CPNE7-201ENST00000268720 FAM236AA0A1B0GUQ0 79 aa13.21□□□□□ -0.29
CPNE7-201ENST00000268720 FAM236BA0A1B0GV22 79 aa13.21□□□□□ -0.29
CPNE7-201ENST00000268720 PAX4O43316 350 aa13.21□□□□□ -0.29
CPNE7-201ENST00000268720 C9orf116Q5BN46 136 aaPredicted RBP13.21□□□□□ -0.29
CPNE7-201ENST00000268720 TRAV13-2A0A0B4J235 113 aa13.21□□□□□ -0.3
CPNE7-201ENST00000268720 HTN3P15516 51 aa13.21□□□□□ -0.3
CPNE7-201ENST00000268720 IGHV3OR16-9A0A0B4J2B5 98 aa13.2□□□□□ -0.3
CPNE7-201ENST00000268720 TRBV7-7A0A0K0K1E9 115 aa13.2□□□□□ -0.3
CPNE7-201ENST00000268720 FLNBO75369 2602 aaKnown RBP13.19□□□□□ -0.3
CPNE7-201ENST00000268720 RPL28P46779 137 aaKnown RBP13.19□□□□□ -0.3
CPNE7-201ENST00000268720 FAM222AQ5U5X8 452 aa13.19□□□□□ -0.3
CPNE7-201ENST00000268720 MALP21145 153 aa13.19□□□□□ -0.3
CPNE7-201ENST00000268720 C6orf226Q5I0X4 101 aa13.18□□□□□ -0.3
CPNE7-201ENST00000268720 LINC00959A0A1B0GUT2 108 aa13.17□□□□□ -0.3
CPNE7-201ENST00000268720 ACYP1P07311 99 aa13.16□□□□□ -0.3
CPNE7-201ENST00000268720 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
CPNE7-201ENST00000268720 LINC00269Q8N2A0 174 aa13.16□□□□□ -0.3
CPNE7-201ENST00000268720 C14orf132Q9NPU4 83 aa13.15□□□□□ -0.3
CPNE7-201ENST00000268720 PRO0255Q9UI72 69 aa13.15□□□□□ -0.3
CPNE7-201ENST00000268720 DNAL4O96015 105 aa13.14□□□□□ -0.31
CPNE7-201ENST00000268720 STAB1Q9NY15 2570 aa13.14□□□□□ -0.31
CPNE7-201ENST00000268720 A0A087WZ39 114 aa13.14□□□□□ -0.31
CPNE7-201ENST00000268720 LECT2O14960 151 aa13.14□□□□□ -0.31
CPNE7-201ENST00000268720 TENM3Q9P273 2699 aa13.14□□□□□ -0.31
CPNE7-201ENST00000268720 NOTCH1P46531 2555 aa13.13□□□□□ -0.31
CPNE7-201ENST00000268720 LINC00643Q86TS7 51 aa13.13□□□□□ -0.31
CPNE7-201ENST00000268720 SMIM9A6NGZ8 99 aa13.12□□□□□ -0.31
CPNE7-201ENST00000268720 NCR3O14931 201 aa13.12□□□□□ -0.31
CPNE7-201ENST00000268720 CELA1Q9UNI1 258 aa13.11□□□□□ -0.31
CPNE7-201ENST00000268720 IGHV4-28A0A0C4DH34 117 aa13.11□□□□□ -0.31
CPNE7-201ENST00000268720 IBA57-AS1B1ANH7 110 aa13.1□□□□□ -0.31
CPNE7-201ENST00000268720 MAST4O15021 2626 aa13.09□□□□□ -0.31
CPNE7-201ENST00000268720 ANGP03950 147 aaKnown RBP13.09□□□□□ -0.31
CPNE7-201ENST00000268720 INAFM2P0DMQ5 153 aa13.09□□□□□ -0.31
CPNE7-201ENST00000268720 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
CPNE7-201ENST00000268720 SMIM20Q8N5G0 67 aa13.09□□□□□ -0.31
CPNE7-201ENST00000268720 PPDPFQ9H3Y8 114 aa13.08□□□□□ -0.31
CPNE7-201ENST00000268720 Q8NDZ9 215 aa13.08□□□□□ -0.32
CPNE7-201ENST00000268720 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
CPNE7-201ENST00000268720 LYRM9A8MSI8 78 aa13.07□□□□□ -0.32
CPNE7-201ENST00000268720 SDIM1Q6ZPB5 146 aa13.07□□□□□ -0.32
CPNE7-201ENST00000268720 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
CPNE7-201ENST00000268720 IGKV3D-7A0A0C4DH55 119 aa13.06□□□□□ -0.32
CPNE7-201ENST00000268720 APOC4P55056 127 aa13.05□□□□□ -0.32
CPNE7-201ENST00000268720 DAD1P61803 113 aa13.05□□□□□ -0.32
CPNE7-201ENST00000268720 Q8NAQ8 132 aa13.05□□□□□ -0.32
CPNE7-201ENST00000268720 SS18Q15532 418 aa13.04□□□□□ -0.32
CPNE7-201ENST00000268720 H0YGX0 51 aa13.04□□□□□ -0.32
CPNE7-201ENST00000268720 F8P00451 2351 aa13.03□□□□□ -0.32
CPNE7-201ENST00000268720 LINC00846Q9NV44 126 aa13.03□□□□□ -0.32
CPNE7-201ENST00000268720 C10orf25Q5T742 122 aa13.03□□□□□ -0.32
CPNE7-201ENST00000268720 CHCHD10Q8WYQ3 142 aaPredicted RBP13.02□□□□□ -0.32
CPNE7-201ENST00000268720 IGHV4-30-4P0DP06 118 aa13.01□□□□□ -0.33
CPNE7-201ENST00000268720 C9orf153Q5TBE3 101 aa12.99□□□□□ -0.33
CPNE7-201ENST00000268720 A0A087WVE0 104 aa12.99□□□□□ -0.33
CPNE7-201ENST00000268720 REG3AQ06141 175 aa12.99□□□□□ -0.33
CPNE7-201ENST00000268720 KLK5Q9Y337 293 aaPredicted RBP12.99□□□□□ -0.33
CPNE7-201ENST00000268720 NANOS2P60321 138 aaKnown RBP12.98□□□□□ -0.33
CPNE7-201ENST00000268720 UNQ6190/PRO20217Q6UXQ8 127 aa12.97□□□□□ -0.33
CPNE7-201ENST00000268720 Q8IZM0 81 aa12.97□□□□□ -0.33
CPNE7-201ENST00000268720 WFDC9Q8NEX5 89 aa12.97□□□□□ -0.33
CPNE7-201ENST00000268720 RETNQ9HD89 108 aa12.97□□□□□ -0.33
CPNE7-201ENST00000268720 BAHCC1Q9P281 2608 aa12.97□□□□□ -0.33
CPNE7-201ENST00000268720 C3orf22Q8N5N4 141 aa12.97□□□□□ -0.33
CPNE7-201ENST00000268720 MIFP14174 115 aa12.96□□□□□ -0.33
CPNE7-201ENST00000268720 CXCL5P42830 114 aa12.96□□□□□ -0.33
CPNE7-201ENST00000268720 KLK12Q9UKR0 248 aa12.96□□□□□ -0.33
CPNE7-201ENST00000268720 OBSCN-AS1Q96MR7 158 aa12.96□□□□□ -0.33
CPNE7-201ENST00000268720 ORMDL1Q9P0S3 153 aa12.96□□□□□ -0.33
CPNE7-201ENST00000268720 KIAA0087Q14695 138 aa12.95□□□□□ -0.34
CPNE7-201ENST00000268720 CFAP161Q6P656 301 aa12.95□□□□□ -0.34
CPNE7-201ENST00000268720 SVIPQ8NHG7 77 aa12.95□□□□□ -0.34
CPNE7-201ENST00000268720 CSMD3Q7Z407 3707 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms