RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
COPS3-201ENST00000268717 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
COPS3-201ENST00000268717 DNAH10OSP0CZ25 163 aa10.38□□□□□ -0.75
COPS3-201ENST00000268717 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
COPS3-201ENST00000268717 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
COPS3-201ENST00000268717 CXCL5P42830 114 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 CCL18P55774 89 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.36□□□□□ -0.75
COPS3-201ENST00000268717 APOMO95445 188 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 MUSTN1Q8IVN3 82 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 UBE2WQ96B02 151 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 UPK3BQ9BT76 320 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 TOMM7Q9P0U1 55 aa10.36□□□□□ -0.75
COPS3-201ENST00000268717 IGLV10-54A0A075B6I4 117 aa10.35□□□□□ -0.75
COPS3-201ENST00000268717 IGLL5B9A064 214 aa10.35□□□□□ -0.75
COPS3-201ENST00000268717 PRSS2P07478 247 aa10.35□□□□□ -0.75
COPS3-201ENST00000268717 KLK5Q9Y337 293 aaPredicted RBP10.35□□□□□ -0.75
COPS3-201ENST00000268717 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
COPS3-201ENST00000268717 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
COPS3-201ENST00000268717 K7ERJ3 54 aa10.34□□□□□ -0.75
COPS3-201ENST00000268717 MALP21145 153 aa10.34□□□□□ -0.75
COPS3-201ENST00000268717 C6orf226Q5I0X4 101 aa10.34□□□□□ -0.75
COPS3-201ENST00000268717 MEIG1Q5JSS6 88 aa10.34□□□□□ -0.75
COPS3-201ENST00000268717 LINC00588Q9Y4M8 146 aa10.34□□□□□ -0.75
COPS3-201ENST00000268717 KMT2AQ03164 3969 aa10.33□□□□□ -0.76
COPS3-201ENST00000268717 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
COPS3-201ENST00000268717 KIAA0087Q14695 138 aa10.33□□□□□ -0.76
COPS3-201ENST00000268717 A4D1N5 150 aa10.33□□□□□ -0.76
COPS3-201ENST00000268717 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
COPS3-201ENST00000268717 CFC1BP0CG36 223 aa10.32□□□□□ -0.76
COPS3-201ENST00000268717 CFC1P0CG37 223 aa10.32□□□□□ -0.76
COPS3-201ENST00000268717 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
COPS3-201ENST00000268717 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
COPS3-201ENST00000268717 LINC00308Q8TCZ7 52 aa10.31□□□□□ -0.76
COPS3-201ENST00000268717 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
COPS3-201ENST00000268717 H3BUT2 72 aa10.3□□□□□ -0.76
COPS3-201ENST00000268717 LINC00476Q8WZB0 136 aa10.3□□□□□ -0.76
COPS3-201ENST00000268717 CKS1BP61024 79 aa10.29□□□□□ -0.76
COPS3-201ENST00000268717 VAMP3Q15836 100 aa10.29□□□□□ -0.76
COPS3-201ENST00000268717 PRO1854Q9UHT4 67 aa10.29□□□□□ -0.76
COPS3-201ENST00000268717 C1orf43Q9BWL3 253 aa10.29□□□□□ -0.76
COPS3-201ENST00000268717 FABP2P12104 132 aa10.28□□□□□ -0.76
COPS3-201ENST00000268717 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
COPS3-201ENST00000268717 UBE2V1Q13404 147 aa10.28□□□□□ -0.76
COPS3-201ENST00000268717 COX17Q14061 63 aa10.28□□□□□ -0.76
COPS3-201ENST00000268717 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
COPS3-201ENST00000268717 VPS13DQ5THJ4 4388 aa10.27□□□□□ -0.76
COPS3-201ENST00000268717 DAND5Q8N907 189 aa10.27□□□□□ -0.77
COPS3-201ENST00000268717 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
COPS3-201ENST00000268717 APLNQ9ULZ1 77 aa10.27□□□□□ -0.77
COPS3-201ENST00000268717 LY6G6CO95867 125 aa10.25□□□□□ -0.77
COPS3-201ENST00000268717 GTF2H5Q6ZYL4 71 aa10.25□□□□□ -0.77
COPS3-201ENST00000268717 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
COPS3-201ENST00000268717 DNAH6Q9C0G6 4158 aa10.25□□□□□ -0.77
COPS3-201ENST00000268717 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
COPS3-201ENST00000268717 EIF4EBP3O60516 100 aaPredicted RBP10.25□□□□□ -0.77
COPS3-201ENST00000268717 TSPAN13O95857 204 aa10.25□□□□□ -0.77
COPS3-201ENST00000268717 LINC00158P58513 81 aa10.25□□□□□ -0.77
COPS3-201ENST00000268717 A0A0U1RRA0 63 aa10.24□□□□□ -0.77
COPS3-201ENST00000268717 F8WDY8 70 aa10.24□□□□□ -0.77
COPS3-201ENST00000268717 K7EP34 96 aa10.24□□□□□ -0.77
COPS3-201ENST00000268717 LYRM7Q5U5X0 104 aa10.24□□□□□ -0.77
COPS3-201ENST00000268717 C2orf82Q6UX34 121 aa10.24□□□□□ -0.77
COPS3-201ENST00000268717 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
COPS3-201ENST00000268717 RMI2Q96E14 147 aa10.24□□□□□ -0.77
COPS3-201ENST00000268717 LOC107984156A0A0G2JMH3 177 aa10.23□□□□□ -0.77
COPS3-201ENST00000268717 GAGE10A6NGK3 116 aa10.23□□□□□ -0.77
COPS3-201ENST00000268717 NPC2P61916 151 aa10.23□□□□□ -0.77
COPS3-201ENST00000268717 ARL17AQ8IVW1 177 aa10.23□□□□□ -0.77
COPS3-201ENST00000268717 NAA38Q9BRA0 125 aaKnown RBP10.23□□□□□ -0.77
COPS3-201ENST00000268717 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
COPS3-201ENST00000268717 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
COPS3-201ENST00000268717 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
COPS3-201ENST00000268717 C2orf48Q96LS8 159 aa10.22□□□□□ -0.77
COPS3-201ENST00000268717 PFN2P35080 140 aa10.21□□□□□ -0.78
COPS3-201ENST00000268717 C15orf56Q8N910 161 aa10.21□□□□□ -0.78
COPS3-201ENST00000268717 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
COPS3-201ENST00000268717 ZNF561-AS1K7EIQ3 104 aa10.19□□□□□ -0.78
COPS3-201ENST00000268717 UBE2DNLQ8IWF7 75 aa10.18□□□□□ -0.78
COPS3-201ENST00000268717 C6orf223Q8N319 242 aa10.18□□□□□ -0.78
COPS3-201ENST00000268717 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
COPS3-201ENST00000268717 Q9HAA7 133 aa10.18□□□□□ -0.78
COPS3-201ENST00000268717 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
COPS3-201ENST00000268717 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
COPS3-201ENST00000268717 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
COPS3-201ENST00000268717 C10orf25Q5T742 122 aa10.17□□□□□ -0.78
COPS3-201ENST00000268717 FRAS1Q86XX4 4008 aa10.16□□□□□ -0.78
COPS3-201ENST00000268717 TRBV20-1A0A075B6N2 111 aa10.16□□□□□ -0.78
COPS3-201ENST00000268717 RPL13AP40429 203 aaKnown RBP10.16□□□□□ -0.78
COPS3-201ENST00000268717 NDUFC2O95298 119 aa10.15□□□□□ -0.78
COPS3-201ENST00000268717 Q1RN00 199 aa10.15□□□□□ -0.78
COPS3-201ENST00000268717 CAMK2N2Q96S95 79 aa10.15□□□□□ -0.78
COPS3-201ENST00000268717 DNAH10Q8IVF4 4471 aa10.15□□□□□ -0.79
COPS3-201ENST00000268717 C6orf48Q9UBA6 75 aa10.15□□□□□ -0.79
COPS3-201ENST00000268717 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
COPS3-201ENST00000268717 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
COPS3-201ENST00000268717 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
COPS3-201ENST00000268717 PSMB2P49721 201 aa10.13□□□□□ -0.79
COPS3-201ENST00000268717 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms