RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 C6orf226Q5I0X4 101 aa15.4■□□□□ 0.06
CDR2-201ENST00000268383 PRR3P79522 188 aaKnown RBP15.39■□□□□ 0.05
CDR2-201ENST00000268383 SMIM20Q8N5G0 67 aa15.39■□□□□ 0.05
CDR2-201ENST00000268383 C14orf132Q9NPU4 83 aa15.39■□□□□ 0.05
CDR2-201ENST00000268383 LECT2O14960 151 aa15.39■□□□□ 0.05
CDR2-201ENST00000268383 ACYP1P07311 99 aa15.39■□□□□ 0.05
CDR2-201ENST00000268383 DNAL4O96015 105 aa15.38■□□□□ 0.05
CDR2-201ENST00000268383 PF4P02776 101 aa15.38■□□□□ 0.05
CDR2-201ENST00000268383 FAM222AQ5U5X8 452 aa15.38■□□□□ 0.05
CDR2-201ENST00000268383 Q8N3U1 123 aa15.38■□□□□ 0.05
CDR2-201ENST00000268383 FASNP49327 2511 aaKnown RBP15.37■□□□□ 0.05
CDR2-201ENST00000268383 IBA57-AS1B1ANH7 110 aa15.37■□□□□ 0.05
CDR2-201ENST00000268383 DEFB4AO15263 64 aa15.37■□□□□ 0.05
CDR2-201ENST00000268383 NOTCH2Q04721 2471 aa15.36■□□□□ 0.05
CDR2-201ENST00000268383 CMC4P56277 68 aaPredicted RBP15.36■□□□□ 0.05
CDR2-201ENST00000268383 LINC00643Q86TS7 51 aa15.35■□□□□ 0.05
CDR2-201ENST00000268383 HELZ2Q9BYK8 2649 aaKnown RBP15.35■□□□□ 0.05
CDR2-201ENST00000268383 RNASE1P07998 156 aaKnown RBP15.35■□□□□ 0.05
CDR2-201ENST00000268383 NCR3O14931 201 aa15.34■□□□□ 0.05
CDR2-201ENST00000268383 SPATA3Q8NHX4 192 aa15.33■□□□□ 0.05
CDR2-201ENST00000268383 IGLV10-54A0A075B6I4 117 aa15.33■□□□□ 0.04
CDR2-201ENST00000268383 SMR3AQ99954 134 aa15.33■□□□□ 0.04
CDR2-201ENST00000268383 KRTAP10-3P60369 221 aa15.32■□□□□ 0.04
CDR2-201ENST00000268383 INAFM2P0DMQ5 153 aa15.31■□□□□ 0.04
CDR2-201ENST00000268383 LINC00482Q8N8I6 264 aa15.31■□□□□ 0.04
CDR2-201ENST00000268383 PPDPFQ9H3Y8 114 aa15.31■□□□□ 0.04
CDR2-201ENST00000268383 C16orf95Q9H693 158 aa15.31■□□□□ 0.04
CDR2-201ENST00000268383 FAM110AQ9BQ89 295 aa15.31■□□□□ 0.04
CDR2-201ENST00000268383 TENM1Q9UKZ4 2725 aa15.31■□□□□ 0.04
CDR2-201ENST00000268383 SDIM1Q6ZPB5 146 aa15.3■□□□□ 0.04
CDR2-201ENST00000268383 UNC79Q9P2D8 2635 aa15.3■□□□□ 0.04
CDR2-201ENST00000268383 C9orf116Q5BN46 136 aaPredicted RBP15.29■□□□□ 0.04
CDR2-201ENST00000268383 SS18Q15532 418 aa15.28■□□□□ 0.04
CDR2-201ENST00000268383 LINC00269Q8N2A0 174 aa15.28■□□□□ 0.04
CDR2-201ENST00000268383 X6R8D5 127 aa15.28■□□□□ 0.04
CDR2-201ENST00000268383 TRRAPQ9Y4A5 3859 aa15.28■□□□□ 0.04
CDR2-201ENST00000268383 IGKV3D-7A0A0C4DH55 119 aa15.27■□□□□ 0.03
CDR2-201ENST00000268383 IMUPQ9GZP8 106 aa15.27■□□□□ 0.03
CDR2-201ENST00000268383 H0YGX0 51 aa15.26■□□□□ 0.03
CDR2-201ENST00000268383 LINC00846Q9NV44 126 aa15.25■□□□□ 0.03
CDR2-201ENST00000268383 KIR2DL5BQ8NHK3 375 aa15.25■□□□□ 0.03
CDR2-201ENST00000268383 NANOS2P60321 138 aaKnown RBP15.23■□□□□ 0.03
CDR2-201ENST00000268383 LINC00526Q96FQ7 95 aa15.22■□□□□ 0.03
CDR2-201ENST00000268383 PRO0255Q9UI72 69 aa15.22■□□□□ 0.03
CDR2-201ENST00000268383 Q8IZM0 81 aa15.22■□□□□ 0.03
CDR2-201ENST00000268383 LINC00612Q8N6U2 182 aa15.22■□□□□ 0.03
CDR2-201ENST00000268383 Q8NDZ9 215 aa15.22■□□□□ 0.03
CDR2-201ENST00000268383 DEFB135Q30KP9 77 aa15.21■□□□□ 0.03
CDR2-201ENST00000268383 KLK5Q9Y337 293 aaPredicted RBP15.21■□□□□ 0.02
CDR2-201ENST00000268383 A0A1B0GUV1 79 aa15.2■□□□□ 0.02
CDR2-201ENST00000268383 HECTD1Q9ULT8 2610 aa15.2■□□□□ 0.02
CDR2-201ENST00000268383 OTOGQ6ZRI0 2925 aa15.2■□□□□ 0.02
CDR2-201ENST00000268383 A0A087WVE0 104 aa15.2■□□□□ 0.02
CDR2-201ENST00000268383 LY6G6DO95868 133 aa15.2■□□□□ 0.02
CDR2-201ENST00000268383 ANGP03950 147 aaKnown RBP15.2■□□□□ 0.02
CDR2-201ENST00000268383 HILS1P60008 231 aa15.2■□□□□ 0.02
CDR2-201ENST00000268383 KIAA0087Q14695 138 aa15.19■□□□□ 0.02
CDR2-201ENST00000268383 C9orf153Q5TBE3 101 aa15.19■□□□□ 0.02
CDR2-201ENST00000268383 CHCHD10Q8WYQ3 142 aaPredicted RBP15.18■□□□□ 0.02
CDR2-201ENST00000268383 OBSCN-AS1Q96MR7 158 aa15.18■□□□□ 0.02
CDR2-201ENST00000268383 ATRQ13535 2644 aa15.18■□□□□ 0.02
CDR2-201ENST00000268383 CXCL5P42830 114 aa15.18■□□□□ 0.02
CDR2-201ENST00000268383 ORMDL1Q9P0S3 153 aa15.17■□□□□ 0.02
CDR2-201ENST00000268383 KMT2BQ9UMN6 2715 aaPredicted RBP15.16■□□□□ 0.02
CDR2-201ENST00000268383 C6orf223Q8N319 242 aa15.16■□□□□ 0.02
CDR2-201ENST00000268383 CFAP161Q6P656 301 aa15.15■□□□□ 0.02
CDR2-201ENST00000268383 C3orf22Q8N5N4 141 aa15.15■□□□□ 0.02
CDR2-201ENST00000268383 REG3AQ06141 175 aa15.14■□□□□ 0.01
CDR2-201ENST00000268383 HIVEP1P15822 2718 aa15.14■□□□□ 0.01
CDR2-201ENST00000268383 HTN3P15516 51 aa15.13■□□□□ 0.01
CDR2-201ENST00000268383 C10orf25Q5T742 122 aa15.13■□□□□ 0.01
CDR2-201ENST00000268383 CD164L2Q6UWJ8 174 aa15.13■□□□□ 0.01
CDR2-201ENST00000268383 CELA1Q9UNI1 258 aa15.13■□□□□ 0.01
CDR2-201ENST00000268383 Q8N814 137 aa15.12■□□□□ 0.01
CDR2-201ENST00000268383 C6orf99Q4VX62 202 aa15.1■□□□□ 0.01
CDR2-201ENST00000268383 WFDC9Q8NEX5 89 aa15.1■□□□□ 0.01
CDR2-201ENST00000268383 IGHV4-28A0A0C4DH34 117 aa15.09■□□□□ 0.01
CDR2-201ENST00000268383 UNQ6190/PRO20217Q6UXQ8 127 aa15.09■□□□□ 0.01
CDR2-201ENST00000268383 C2orf48Q96LS8 159 aa15.08■□□□□ 0.01
CDR2-201ENST00000268383 TMEM126AQ9H061 195 aa15.08■□□□□ 0.01
CDR2-201ENST00000268383 PKD1L1Q8TDX9 2849 aa15.08■□□□□ 0.01
CDR2-201ENST00000268383 UQCRQO14949 82 aa15.08■□□□□ 0
CDR2-201ENST00000268383 CYSTM1Q9H1C7 97 aa15.08■□□□□ 0
CDR2-201ENST00000268383 DAD1P61803 113 aa15.07■□□□□ 0
CDR2-201ENST00000268383 HIST1H4AP62805 103 aaKnown RBP15.07■□□□□ 0
CDR2-201ENST00000268383 LINC01561Q8N1V8 128 aa15.07■□□□□ 0
CDR2-201ENST00000268383 CCKP06307 115 aa15.05■□□□□ -0
CDR2-201ENST00000268383 COX7CP15954 63 aa15.05■□□□□ -0
CDR2-201ENST00000268383 Q6JHZ5 121 aa15.05■□□□□ -0
CDR2-201ENST00000268383 TEP1Q99973 2627 aaKnown RBP15.05■□□□□ -0
CDR2-201ENST00000268383 A0A1B0GX51 115 aa15.04■□□□□ -0
CDR2-201ENST00000268383 SMIM9A6NGZ8 99 aa15.04■□□□□ -0
CDR2-201ENST00000268383 S100A7L2Q5SY68 101 aa15.04■□□□□ -0
CDR2-201ENST00000268383 LOC107984640A0A0U1RRK4 108 aa15.03■□□□□ -0
CDR2-201ENST00000268383 LYRM9A8MSI8 78 aa15.03■□□□□ -0
CDR2-201ENST00000268383 LINC00167Q96N53 147 aa15.03■□□□□ -0
CDR2-201ENST00000268383 NSD1Q96L73 2696 aaPredicted RBP15.03■□□□□ -0
CDR2-201ENST00000268383 hADV29S1A0JD25 119 aa15.03■□□□□ -0
CDR2-201ENST00000268383 RPL18AQ02543 176 aaKnown RBP15.02□□□□□ -0.01
CDR2-201ENST00000268383 KLK12Q9UKR0 248 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms