RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 CDIP1Q9H305 208 aa11.61□□□□□ -0.55
CHKA-201ENST00000265689 MRPL23Q16540 153 aaKnown RBP11.61□□□□□ -0.55
CHKA-201ENST00000265689 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
CHKA-201ENST00000265689 TRIAP1O43715 76 aa11.6□□□□□ -0.55
CHKA-201ENST00000265689 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
CHKA-201ENST00000265689 TRBV30A0A0K0K1B3 111 aa11.59□□□□□ -0.55
CHKA-201ENST00000265689 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
CHKA-201ENST00000265689 ICOSQ9Y6W8 199 aa11.59□□□□□ -0.55
CHKA-201ENST00000265689 LYSTQ99698 3801 aa11.59□□□□□ -0.55
CHKA-201ENST00000265689 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
CHKA-201ENST00000265689 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
CHKA-201ENST00000265689 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
CHKA-201ENST00000265689 ANKRD29Q8N6D5 301 aa11.57□□□□□ -0.56
CHKA-201ENST00000265689 IGLV10-54A0A075B6I4 117 aa11.56□□□□□ -0.56
CHKA-201ENST00000265689 MT-ATP8P03928 68 aa11.56□□□□□ -0.56
CHKA-201ENST00000265689 MRAPQ8TCY5 172 aa11.56□□□□□ -0.56
CHKA-201ENST00000265689 PPDPFLQ8WWR9 84 aa11.56□□□□□ -0.56
CHKA-201ENST00000265689 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
CHKA-201ENST00000265689 REG3AQ06141 175 aa11.55□□□□□ -0.56
CHKA-201ENST00000265689 LELP1Q5T871 98 aa11.55□□□□□ -0.56
CHKA-201ENST00000265689 COPS9Q8WXC6 57 aa11.55□□□□□ -0.56
CHKA-201ENST00000265689 C9JAW5 83 aa11.55□□□□□ -0.56
CHKA-201ENST00000265689 XGP55808 180 aa11.55□□□□□ -0.56
CHKA-201ENST00000265689 LINC00158P58513 81 aa11.55□□□□□ -0.56
CHKA-201ENST00000265689 C6orf226Q5I0X4 101 aa11.55□□□□□ -0.56
CHKA-201ENST00000265689 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
CHKA-201ENST00000265689 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
CHKA-201ENST00000265689 SLC25A20O43772 301 aa11.53□□□□□ -0.56
CHKA-201ENST00000265689 PFN2P35080 140 aa11.53□□□□□ -0.56
CHKA-201ENST00000265689 ATXN8Q156A1 80 aa11.53□□□□□ -0.56
CHKA-201ENST00000265689 CD164L2Q6UWJ8 174 aa11.53□□□□□ -0.56
CHKA-201ENST00000265689 PRKDCP78527 4128 aaKnown RBP11.53□□□□□ -0.56
CHKA-201ENST00000265689 CKS1BP61024 79 aa11.52□□□□□ -0.57
CHKA-201ENST00000265689 C2orf82Q6UX34 121 aa11.52□□□□□ -0.57
CHKA-201ENST00000265689 Q6ZTC4 211 aa11.52□□□□□ -0.57
CHKA-201ENST00000265689 MEGF8Q7Z7M0 2845 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 A0A1B0GV72 72 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 IBA57-AS1B1ANH7 110 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 LYPD5Q6UWN5 251 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 CLEC2BQ92478 149 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 COX7A2LO14548 114 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 COX6CP09669 75 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 DEFB121Q5J5C9 76 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 Q8IZM0 81 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 CSMD3Q7Z407 3707 aa11.51□□□□□ -0.57
CHKA-201ENST00000265689 LINC01620Q4KN68 170 aa11.5□□□□□ -0.57
CHKA-201ENST00000265689 LINC01561Q8N1V8 128 aa11.5□□□□□ -0.57
CHKA-201ENST00000265689 A0A0J9YWU9 116 aa11.49□□□□□ -0.57
CHKA-201ENST00000265689 K7EIL1 84 aa11.49□□□□□ -0.57
CHKA-201ENST00000265689 KPRPQ5T749 579 aaPredicted RBP11.49□□□□□ -0.57
CHKA-201ENST00000265689 PPDPFQ9H3Y8 114 aa11.49□□□□□ -0.57
CHKA-201ENST00000265689 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
CHKA-201ENST00000265689 DNAH9Q9NYC9 4486 aa11.48□□□□□ -0.57
CHKA-201ENST00000265689 CCL18P55774 89 aa11.48□□□□□ -0.57
CHKA-201ENST00000265689 SND1-IT1Q9HBX3 110 aa11.48□□□□□ -0.57
CHKA-201ENST00000265689 KIAA0087Q14695 138 aa11.48□□□□□ -0.57
CHKA-201ENST00000265689 MALP21145 153 aa11.47□□□□□ -0.57
CHKA-201ENST00000265689 TENM2Q9NT68 2774 aa11.47□□□□□ -0.57
CHKA-201ENST00000265689 IGKV2-28A0A075B6P5 120 aa11.46□□□□□ -0.57
CHKA-201ENST00000265689 IGKV2D-28P01615 120 aa11.46□□□□□ -0.57
CHKA-201ENST00000265689 NANOS2P60321 138 aaKnown RBP11.46□□□□□ -0.57
CHKA-201ENST00000265689 NTN5Q8WTR8 489 aaPredicted RBP11.46□□□□□ -0.57
CHKA-201ENST00000265689 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.58
CHKA-201ENST00000265689 H3BNG1 76 aa11.45□□□□□ -0.58
CHKA-201ENST00000265689 ENHOQ6UWT2 76 aa11.45□□□□□ -0.58
CHKA-201ENST00000265689 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
CHKA-201ENST00000265689 LST1O00453 97 aa11.44□□□□□ -0.58
CHKA-201ENST00000265689 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
CHKA-201ENST00000265689 WFDC10BQ8IUB3 73 aa11.44□□□□□ -0.58
CHKA-201ENST00000265689 TRBV10-2A0A0K0K1G8 114 aa11.43□□□□□ -0.58
CHKA-201ENST00000265689 TEX49A0A1B0GTD5 131 aa11.43□□□□□ -0.58
CHKA-201ENST00000265689 CRPP02741 224 aa11.43□□□□□ -0.58
CHKA-201ENST00000265689 TRAV13-2A0A0B4J235 113 aa11.43□□□□□ -0.58
CHKA-201ENST00000265689 M0QXV9 152 aa11.42□□□□□ -0.58
CHKA-201ENST00000265689 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
CHKA-201ENST00000265689 DEFB131BA0A096LNP1 70 aa11.41□□□□□ -0.58
CHKA-201ENST00000265689 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
CHKA-201ENST00000265689 UBE2WQ96B02 151 aa11.41□□□□□ -0.58
CHKA-201ENST00000265689 LINC00526Q96FQ7 95 aa11.41□□□□□ -0.58
CHKA-201ENST00000265689 C6orf223Q8N319 242 aa11.4□□□□□ -0.58
CHKA-201ENST00000265689 ESRGQ1W209 222 aa11.4□□□□□ -0.59
CHKA-201ENST00000265689 CXCL5P42830 114 aa11.39□□□□□ -0.59
CHKA-201ENST00000265689 KLK5Q9Y337 293 aaPredicted RBP11.39□□□□□ -0.59
CHKA-201ENST00000265689 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
CHKA-201ENST00000265689 C10orf25Q5T742 122 aa11.38□□□□□ -0.59
CHKA-201ENST00000265689 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
CHKA-201ENST00000265689 DNAH7Q8WXX0 4024 aa11.37□□□□□ -0.59
CHKA-201ENST00000265689 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
CHKA-201ENST00000265689 UNQ6190/PRO20217Q6UXQ8 127 aa11.37□□□□□ -0.59
CHKA-201ENST00000265689 SMIM11BQ8TCY0 68 aa11.37□□□□□ -0.59
CHKA-201ENST00000265689 TGP01266 2768 aa11.37□□□□□ -0.59
CHKA-201ENST00000265689 FAM218AQ96MZ4 157 aa11.36□□□□□ -0.59
CHKA-201ENST00000265689 COX17Q14061 63 aa11.35□□□□□ -0.59
CHKA-201ENST00000265689 OR13C6PQ8NH95 151 aa11.35□□□□□ -0.59
CHKA-201ENST00000265689 H3BT86 120 aa11.35□□□□□ -0.59
CHKA-201ENST00000265689 PRR3P79522 188 aaKnown RBP11.35□□□□□ -0.59
CHKA-201ENST00000265689 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
CHKA-201ENST00000265689 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
CHKA-201ENST00000265689 ANAPC13Q9BS18 74 aa11.32□□□□□ -0.6
CHKA-201ENST00000265689 SNCGO76070 127 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms