RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 A0A087WYN8 130 aa12.32□□□□□ -0.44
SRF-201ENST00000265354 ZNF561-AS1K7EIQ3 104 aa12.32□□□□□ -0.44
SRF-201ENST00000265354 COL27A1Q8IZC6 1860 aaPredicted RBP12.32□□□□□ -0.44
SRF-201ENST00000265354 FUSP35637 526 aaKnown RBP eCLIP12.32□□□□□ -0.44
SRF-201ENST00000265354 NBEAL2Q6ZNJ1 2754 aa12.32□□□□□ -0.44
SRF-201ENST00000265354 CDC42SE2Q9NRR3 84 aa12.31□□□□□ -0.44
SRF-201ENST00000265354 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
SRF-201ENST00000265354 JMJD7-PLA2G4BH0Y9G9 81 aa12.31□□□□□ -0.44
SRF-201ENST00000265354 HILS1P60008 231 aa12.31□□□□□ -0.44
SRF-201ENST00000265354 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
SRF-201ENST00000265354 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
SRF-201ENST00000265354 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
SRF-201ENST00000265354 MAST4O15021 2626 aa12.29□□□□□ -0.44
SRF-201ENST00000265354 J3QKU1 62 aa12.29□□□□□ -0.44
SRF-201ENST00000265354 KLK12Q9UKR0 248 aa12.29□□□□□ -0.44
SRF-201ENST00000265354 PMAIP1Q13794 54 aa12.29□□□□□ -0.44
SRF-201ENST00000265354 DEFB135Q30KP9 77 aa12.29□□□□□ -0.44
SRF-201ENST00000265354 IGLV4-60A0A075B6I1 120 aa12.29□□□□□ -0.44
SRF-201ENST00000265354 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
SRF-201ENST00000265354 SERP1Q9Y6X1 66 aa12.28□□□□□ -0.44
SRF-201ENST00000265354 SBSPONQ8IVN8 264 aa12.28□□□□□ -0.44
SRF-201ENST00000265354 ZNF702PQ9H963 129 aa12.28□□□□□ -0.44
SRF-201ENST00000265354 CSMD1Q96PZ7 3565 aa12.27□□□□□ -0.44
SRF-201ENST00000265354 C9orf116Q5BN46 136 aaPredicted RBP12.27□□□□□ -0.44
SRF-201ENST00000265354 FAM19A1Q7Z5A9 133 aa12.27□□□□□ -0.45
SRF-201ENST00000265354 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
SRF-201ENST00000265354 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
SRF-201ENST00000265354 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
SRF-201ENST00000265354 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
SRF-201ENST00000265354 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
SRF-201ENST00000265354 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
SRF-201ENST00000265354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.26□□□□□ -0.45
SRF-201ENST00000265354 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
SRF-201ENST00000265354 DEFB113Q30KQ7 82 aa12.25□□□□□ -0.45
SRF-201ENST00000265354 MGAM2Q2M2H8 2515 aa12.25□□□□□ -0.45
SRF-201ENST00000265354 TMEM256-PLSCR3K7ERE1 68 aa12.25□□□□□ -0.45
SRF-201ENST00000265354 NREPQ16612 68 aa12.25□□□□□ -0.45
SRF-201ENST00000265354 NANOS2P60321 138 aaKnown RBP12.25□□□□□ -0.45
SRF-201ENST00000265354 Q6YL49 198 aa12.25□□□□□ -0.45
SRF-201ENST00000265354 LINC00846Q9NV44 126 aa12.25□□□□□ -0.45
SRF-201ENST00000265354 A8MTW9 85 aa12.24□□□□□ -0.45
SRF-201ENST00000265354 PSPHP1O15172 72 aa12.24□□□□□ -0.45
SRF-201ENST00000265354 SPAG11BQ08648 103 aa12.24□□□□□ -0.45
SRF-201ENST00000265354 RMI2Q96E14 147 aa12.24□□□□□ -0.45
SRF-201ENST00000265354 GCN1Q92616 2671 aaKnown RBP12.24□□□□□ -0.45
SRF-201ENST00000265354 CRYGAP11844 174 aa12.23□□□□□ -0.45
SRF-201ENST00000265354 C1orf158Q8N1D5 194 aa12.23□□□□□ -0.45
SRF-201ENST00000265354 IBA57-AS1B1ANH7 110 aa12.22□□□□□ -0.45
SRF-201ENST00000265354 FLNAP21333 2647 aaKnown RBP12.22□□□□□ -0.45
SRF-201ENST00000265354 LINC00482Q8N8I6 264 aa12.22□□□□□ -0.45
SRF-201ENST00000265354 HIGD2BQ4VC39 106 aa12.21□□□□□ -0.45
SRF-201ENST00000265354 Q6JHZ5 121 aa12.21□□□□□ -0.45
SRF-201ENST00000265354 BBC3Q96PG8 261 aaPredicted RBP12.21□□□□□ -0.46
SRF-201ENST00000265354 LITAFQ99732 161 aa12.21□□□□□ -0.46
SRF-201ENST00000265354 RPS28P62857 69 aaKnown RBP12.2□□□□□ -0.46
SRF-201ENST00000265354 LINC00336Q6ZUF6 198 aa12.2□□□□□ -0.46
SRF-201ENST00000265354 FLNCQ14315 2725 aa12.2□□□□□ -0.46
SRF-201ENST00000265354 CHCHD10Q8WYQ3 142 aaPredicted RBP12.19□□□□□ -0.46
SRF-201ENST00000265354 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
SRF-201ENST00000265354 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
SRF-201ENST00000265354 LINC00959A0A1B0GUT2 108 aa12.19□□□□□ -0.46
SRF-201ENST00000265354 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
SRF-201ENST00000265354 DNAJC9-AS1A6NH13 148 aa12.19□□□□□ -0.46
SRF-201ENST00000265354 IGHV4-31P0DP07 118 aa12.19□□□□□ -0.46
SRF-201ENST00000265354 Q6ZQY7 126 aa12.19□□□□□ -0.46
SRF-201ENST00000265354 PRO0255Q9UI72 69 aa12.18□□□□□ -0.46
SRF-201ENST00000265354 CUBNO60494 3623 aa12.17□□□□□ -0.46
SRF-201ENST00000265354 REG3AQ06141 175 aa12.17□□□□□ -0.46
SRF-201ENST00000265354 CFAP46Q8IYW2 2715 aa12.17□□□□□ -0.46
SRF-201ENST00000265354 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
SRF-201ENST00000265354 KRTAP10-9P60411 292 aa12.16□□□□□ -0.46
SRF-201ENST00000265354 PRORYQ9H606 182 aa12.16□□□□□ -0.46
SRF-201ENST00000265354 IGKV2D-24A0A075B6R9 120 aa12.16□□□□□ -0.46
SRF-201ENST00000265354 MIFP14174 115 aa12.16□□□□□ -0.46
SRF-201ENST00000265354 NKAPP1Q8N9T2 125 aa12.16□□□□□ -0.46
SRF-201ENST00000265354 ITPR3Q14573 2671 aa12.16□□□□□ -0.46
SRF-201ENST00000265354 TRBV7-6A0A0J9YX20 115 aa12.15□□□□□ -0.46
SRF-201ENST00000265354 SMCR5Q8TEV8 140 aa12.15□□□□□ -0.46
SRF-201ENST00000265354 A0A087WZ39 114 aa12.14□□□□□ -0.47
SRF-201ENST00000265354 TRBV6-4A0A1B0GX49 114 aa12.14□□□□□ -0.47
SRF-201ENST00000265354 ATP5EP2Q5VTU8 51 aa12.14□□□□□ -0.47
SRF-201ENST00000265354 CHKB-CPT1BH3BT56 60 aa12.13□□□□□ -0.47
SRF-201ENST00000265354 ZANQ9Y493 2812 aa12.13□□□□□ -0.47
SRF-201ENST00000265354 C11orf72Q8NBR9 251 aa12.12□□□□□ -0.47
SRF-201ENST00000265354 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
SRF-201ENST00000265354 UBE2DNLQ8IWF7 75 aa12.12□□□□□ -0.47
SRF-201ENST00000265354 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
SRF-201ENST00000265354 SVEP1Q4LDE5 3571 aa12.11□□□□□ -0.47
SRF-201ENST00000265354 A6NED7 52 aa12.11□□□□□ -0.47
SRF-201ENST00000265354 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
SRF-201ENST00000265354 DIRC1Q969H9 104 aa12.11□□□□□ -0.47
SRF-201ENST00000265354 BPY2O14599 106 aa12.1□□□□□ -0.47
SRF-201ENST00000265354 UNQ6190/PRO20217Q6UXQ8 127 aa12.1□□□□□ -0.47
SRF-201ENST00000265354 IGLV5-39A0A0G2JS06 123 aa12.1□□□□□ -0.47
SRF-201ENST00000265354 C3orf84H3BNL1 204 aa12.09□□□□□ -0.47
SRF-201ENST00000265354 NDUFC1O43677 76 aa12.09□□□□□ -0.47
SRF-201ENST00000265354 TEX15Q9BXT5 2789 aa12.09□□□□□ -0.47
SRF-201ENST00000265354 PSCAO43653 123 aa12.09□□□□□ -0.47
SRF-201ENST00000265354 FAM19A3Q7Z5A8 133 aa12.09□□□□□ -0.47
SRF-201ENST00000265354 MP68P56378 58 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms