RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 BEAN1Q3B7T3 259 aa11.47□□□□□ -0.57
PDZRN3-201ENST00000263666 TIMM17BO60830 172 aa11.47□□□□□ -0.57
PDZRN3-201ENST00000263666 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
PDZRN3-201ENST00000263666 XAGE1AQ9HD64 81 aa11.46□□□□□ -0.58
PDZRN3-201ENST00000263666 OVOL2Q9BRP0 275 aa11.46□□□□□ -0.58
PDZRN3-201ENST00000263666 A0A087WVE0 104 aa11.45□□□□□ -0.58
PDZRN3-201ENST00000263666 RPL18AQ02543 176 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-201ENST00000263666 LINC00643Q86TS7 51 aa11.45□□□□□ -0.58
PDZRN3-201ENST00000263666 CSMD2Q7Z408 3487 aa11.45□□□□□ -0.58
PDZRN3-201ENST00000263666 LINC00959A0A1B0GUT2 108 aa11.45□□□□□ -0.58
PDZRN3-201ENST00000263666 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
PDZRN3-201ENST00000263666 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
PDZRN3-201ENST00000263666 TRBV6-4A0A1B0GX49 114 aa11.44□□□□□ -0.58
PDZRN3-201ENST00000263666 H0YGX0 51 aa11.44□□□□□ -0.58
PDZRN3-201ENST00000263666 ACYP1P07311 99 aa11.44□□□□□ -0.58
PDZRN3-201ENST00000263666 A8MTW9 85 aa11.43□□□□□ -0.58
PDZRN3-201ENST00000263666 Q8N3U1 123 aa11.43□□□□□ -0.58
PDZRN3-201ENST00000263666 TRACP01848 142 aa11.43□□□□□ -0.58
PDZRN3-201ENST00000263666 CHCHD10Q8WYQ3 142 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-201ENST00000263666 HIGD2BQ4VC39 106 aa11.42□□□□□ -0.58
PDZRN3-201ENST00000263666 TRAV23DV6A0A075B6W5 121 aa11.42□□□□□ -0.58
PDZRN3-201ENST00000263666 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
PDZRN3-201ENST00000263666 C6orf99Q4VX62 202 aa11.42□□□□□ -0.58
PDZRN3-201ENST00000263666 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-201ENST00000263666 NOTCH1P46531 2555 aa11.42□□□□□ -0.58
PDZRN3-201ENST00000263666 ZNF561-AS1K7EIQ3 104 aa11.41□□□□□ -0.58
PDZRN3-201ENST00000263666 REG3AQ06141 175 aa11.4□□□□□ -0.58
PDZRN3-201ENST00000263666 CITED1Q99966 193 aa11.4□□□□□ -0.58
PDZRN3-201ENST00000263666 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
PDZRN3-201ENST00000263666 FHL2Q14192 279 aa11.4□□□□□ -0.58
PDZRN3-201ENST00000263666 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
PDZRN3-201ENST00000263666 hADV29S1A0JD25 119 aa11.4□□□□□ -0.59
PDZRN3-201ENST00000263666 UBL5Q9BZL1 73 aa11.4□□□□□ -0.59
PDZRN3-201ENST00000263666 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
PDZRN3-201ENST00000263666 FAM104AQ969W3 186 aa11.39□□□□□ -0.59
PDZRN3-201ENST00000263666 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
PDZRN3-201ENST00000263666 CXCL5P42830 114 aa11.39□□□□□ -0.59
PDZRN3-201ENST00000263666 SPART-AS1P0CW21 52 aa11.38□□□□□ -0.59
PDZRN3-201ENST00000263666 DEFB105AQ8NG35 78 aa11.38□□□□□ -0.59
PDZRN3-201ENST00000263666 A0A096LNT2 108 aa11.38□□□□□ -0.59
PDZRN3-201ENST00000263666 SCXQ7RTU7 201 aa11.38□□□□□ -0.59
PDZRN3-201ENST00000263666 APCP25054 2843 aa11.38□□□□□ -0.59
PDZRN3-201ENST00000263666 FAM110AQ9BQ89 295 aa11.38□□□□□ -0.59
PDZRN3-201ENST00000263666 NBEAL1Q6ZS30 2694 aa11.37□□□□□ -0.59
PDZRN3-201ENST00000263666 SHISA2Q6UWI4 295 aa11.37□□□□□ -0.59
PDZRN3-201ENST00000263666 UBE2DNLQ8IWF7 75 aa11.37□□□□□ -0.59
PDZRN3-201ENST00000263666 C6orf223Q8N319 242 aa11.35□□□□□ -0.59
PDZRN3-201ENST00000263666 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
PDZRN3-201ENST00000263666 IGLV1-51P01701 117 aa11.35□□□□□ -0.59
PDZRN3-201ENST00000263666 FSHBP01225 129 aa11.35□□□□□ -0.59
PDZRN3-201ENST00000263666 PRB2P02812 416 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-201ENST00000263666 UNQ6190/PRO20217Q6UXQ8 127 aa11.34□□□□□ -0.59
PDZRN3-201ENST00000263666 NHLRC4P0CG21 123 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-201ENST00000263666 C16orf95Q9H693 158 aa11.34□□□□□ -0.59
PDZRN3-201ENST00000263666 IGKV2D-24A0A075B6R9 120 aa11.33□□□□□ -0.6
PDZRN3-201ENST00000263666 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
PDZRN3-201ENST00000263666 DSCR8Q96T75 97 aa11.33□□□□□ -0.6
PDZRN3-201ENST00000263666 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
PDZRN3-201ENST00000263666 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
PDZRN3-201ENST00000263666 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
PDZRN3-201ENST00000263666 A0A087WZ39 114 aa11.32□□□□□ -0.6
PDZRN3-201ENST00000263666 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-201ENST00000263666 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-201ENST00000263666 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
PDZRN3-201ENST00000263666 LINC00846Q9NV44 126 aa11.31□□□□□ -0.6
PDZRN3-201ENST00000263666 VPS13CQ709C8 3753 aa11.31□□□□□ -0.6
PDZRN3-201ENST00000263666 SMCR5Q8TEV8 140 aa11.31□□□□□ -0.6
PDZRN3-201ENST00000263666 CR1P17927 2039 aa11.31□□□□□ -0.6
PDZRN3-201ENST00000263666 IGKV2-28A0A075B6P5 120 aa11.3□□□□□ -0.6
PDZRN3-201ENST00000263666 IGKV2D-28P01615 120 aa11.3□□□□□ -0.6
PDZRN3-201ENST00000263666 ATOX1O00244 68 aa11.3□□□□□ -0.6
PDZRN3-201ENST00000263666 ZFHX3Q15911 3703 aa11.3□□□□□ -0.6
PDZRN3-201ENST00000263666 FAM240AA0A1B0GVK7 77 aa11.29□□□□□ -0.6
PDZRN3-201ENST00000263666 GHRHP01286 108 aa11.29□□□□□ -0.6
PDZRN3-201ENST00000263666 BAHCC1Q9P281 2608 aa11.28□□□□□ -0.6
PDZRN3-201ENST00000263666 C9orf129Q5T035 196 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-201ENST00000263666 Q6ZQY7 126 aa11.28□□□□□ -0.6
PDZRN3-201ENST00000263666 C3orf22Q8N5N4 141 aa11.28□□□□□ -0.6
PDZRN3-201ENST00000263666 STAB1Q9NY15 2570 aa11.28□□□□□ -0.6
PDZRN3-201ENST00000263666 RBM3P98179 157 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-201ENST00000263666 HIVEP1P15822 2718 aa11.27□□□□□ -0.6
PDZRN3-201ENST00000263666 Q6Q795 121 aa11.27□□□□□ -0.61
PDZRN3-201ENST00000263666 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
PDZRN3-201ENST00000263666 C20orf197Q8N268 126 aa11.27□□□□□ -0.61
PDZRN3-201ENST00000263666 COL6A5A8TX70 2615 aa11.27□□□□□ -0.61
PDZRN3-201ENST00000263666 GIG44P09565 113 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-201ENST00000263666 UQCRQO14949 82 aa11.26□□□□□ -0.61
PDZRN3-201ENST00000263666 USP17L23D6RBM5 183 aa11.26□□□□□ -0.61
PDZRN3-201ENST00000263666 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
PDZRN3-201ENST00000263666 CD164L2Q6UWJ8 174 aa11.25□□□□□ -0.61
PDZRN3-201ENST00000263666 CYSRT1A8MQ03 144 aa11.25□□□□□ -0.61
PDZRN3-201ENST00000263666 M0QXV9 152 aa11.25□□□□□ -0.61
PDZRN3-201ENST00000263666 RETNQ9HD89 108 aa11.24□□□□□ -0.61
PDZRN3-201ENST00000263666 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
PDZRN3-201ENST00000263666 JMJD7-PLA2G4BH0Y9G9 81 aa11.24□□□□□ -0.61
PDZRN3-201ENST00000263666 FAM19A1Q7Z5A9 133 aa11.24□□□□□ -0.61
PDZRN3-201ENST00000263666 PSCAO43653 123 aa11.23□□□□□ -0.61
PDZRN3-201ENST00000263666 IGHV4-30-4P0DP06 118 aa11.23□□□□□ -0.61
PDZRN3-201ENST00000263666 UPK3BQ9BT76 320 aa11.23□□□□□ -0.61
PDZRN3-201ENST00000263666 Q8IZM0 81 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms