RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 LINC00612Q8N6U2 182 aa2.59□□□□□ -1.99
CDRT1-201ENST00000261644 C4orf3Q8WVX3 66 aa2.59□□□□□ -1.99
CDRT1-201ENST00000261644 TMEM243Q9BU79 118 aa2.59□□□□□ -1.99
CDRT1-201ENST00000261644 TNRC18O15417 2968 aaPredicted RBP2.59□□□□□ -2
CDRT1-201ENST00000261644 FREM2Q5SZK8 3169 aa2.59□□□□□ -2
CDRT1-201ENST00000261644 TRAV7A0A075B6U4 112 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 PFN2P35080 140 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 BRD3OSQ6XYD6 125 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 MIR7-3HGQ8N6C7 128 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 Q8N814 137 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 KIR2DL5BQ8NHK3 375 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 ZNF702PQ9H963 129 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 SERP1Q9Y6X1 66 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 CFAP54Q96N23 3096 aa2.58□□□□□ -2
CDRT1-201ENST00000261644 MAP1BP46821 2468 aaKnown RBP2.58□□□□□ -2
CDRT1-201ENST00000261644 CELSR3Q9NYQ7 3312 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 RP1L1Q8IWN7 2480 aaPredicted RBP2.57□□□□□ -2
CDRT1-201ENST00000261644 IGKV3-7A0A075B6H7 116 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 GVQW2A0A096LPI5 108 aaPredicted RBP2.57□□□□□ -2
CDRT1-201ENST00000261644 TRBV6-8A0A0A6YYG3 113 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 TRAV13-1A0A0B4J241 112 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 A0A0J9YWU9 116 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 PLAC8L1A1L4L8 177 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 LY6EQ16553 131 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 Q5XG85 94 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 C6orf223Q8N319 242 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 CSNK1G2-AS1Q8NCQ2 148 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 C16orf74Q96GX8 76 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 MED13LQ71F56 2210 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 COL6A6A6NMZ7 2263 aa2.57□□□□□ -2
CDRT1-201ENST00000261644 ZZEF1O43149 2961 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 COL6A3P12111 3177 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 EYSQ5T1H1 3165 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 PTPRQQ9UMZ3 2332 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 CEP250Q9BV73 2442 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 LINC00959A0A1B0GUT2 108 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 KNCNA6PVL3 124 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 UBE2L6O14933 153 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 KIAA0087Q14695 138 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 DEFB112Q30KQ8 113 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 LINC00575Q6W349 94 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 Q6ZQT0 140 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 FAM19A1Q7Z5A9 133 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 KRTAP7-1Q8IUC3 87 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 UBL5Q9BZL1 73 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 C14orf132Q9NPU4 83 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 CELA1Q9UNI1 258 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 NBEAQ8NFP9 2946 aa2.56□□□□□ -2
CDRT1-201ENST00000261644 EP300Q09472 2414 aaPredicted RBP2.56□□□□□ -2
CDRT1-201ENST00000261644 PRUNE2Q8WUY3 3088 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 DMDP11532 3685 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 SMIM26A0A096LP01 95 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 IGHV3-73A0A0B4J1V6 119 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 IGHV3-38A0A0C4DH36 116 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 H7BZZ5 65 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 LECT2O14960 151 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 SPTBN2O15020 2390 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 IGLV6-57P01721 117 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 GIG44P09565 113 aaPredicted RBP2.55□□□□□ -2
CDRT1-201ENST00000261644 XCL1P47992 114 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 LINC00158P58513 81 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 NPC2P61916 151 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 RBM3P98179 157 aaKnown RBP2.55□□□□□ -2
CDRT1-201ENST00000261644 C14orf177Q52M58 125 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 RNASE13Q5GAN3 156 aaKnown RBP2.55□□□□□ -2
CDRT1-201ENST00000261644 C9orf129Q5T035 196 aaKnown RBP2.55□□□□□ -2
CDRT1-201ENST00000261644 C1orf195Q5TG92 126 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 C11orf45Q8TAV5 145 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 CCL19Q99731 98 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 XCL2Q9UBD3 114 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 PRO0628Q9UI54 55 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 LOC400499M0QZD8 3231 aa2.55□□□□□ -2
CDRT1-201ENST00000261644 SPENQ96T58 3664 aaKnown RBP2.54□□□□□ -2
CDRT1-201ENST00000261644 TRGV1A0A0A0MS02 117 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 TRBV7-4A0A0J9YYF1 115 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 A0A0U1RQV1 116 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 C19orf84I3L1E1 186 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 APOC4P55056 127 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.54□□□□□ -2
CDRT1-201ENST00000261644 DEFB104AQ8WTQ1 72 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 CYSTM1Q9H1C7 97 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 C16orf95Q9H693 158 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 LAMTOR3Q9UHA4 124 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 ABCA2Q9BZC7 2435 aa2.54□□□□□ -2
CDRT1-201ENST00000261644 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.53□□□□□ -2
CDRT1-201ENST00000261644 SORL1Q92673 2214 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 IGLV4-60A0A075B6I1 120 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 IGKV3D-7A0A0C4DH55 119 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 LCE6AA0A183 80 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 FAM236DA0A1B0GTK5 79 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 NCR3O14931 201 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 OXTP01178 125 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 FAM236CP0DP71 79 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 C4orf26Q17RF5 130 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 C10orf99Q6UWK7 81 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 Q6ZTI0 123 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 MAPK1IP1LQ8NDC0 245 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 OCR1Q9BZK8 76 aa2.53□□□□□ -2
CDRT1-201ENST00000261644 SPTBN1Q01082 2364 aaKnown RBP2.53□□□□□ -2
CDRT1-201ENST00000261644 PTPRZ1P23471 2315 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms