RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 HIST1H4GQ99525 98 aa6.32□□□□□ -1.4
NIP7-202ENST00000254941 SPANXB1Q9NS25 103 aaPredicted RBP6.32□□□□□ -1.4
NIP7-202ENST00000254941 IGKV2D-24A0A075B6R9 120 aa6.31□□□□□ -1.4
NIP7-202ENST00000254941 PRSS2P07478 247 aa6.31□□□□□ -1.4
NIP7-202ENST00000254941 LITAFQ99732 161 aa6.31□□□□□ -1.4
NIP7-202ENST00000254941 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
NIP7-202ENST00000254941 Q9HAA7 133 aa6.31□□□□□ -1.4
NIP7-202ENST00000254941 VPS13DQ5THJ4 4388 aa6.31□□□□□ -1.4
NIP7-202ENST00000254941 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
NIP7-202ENST00000254941 TIMM17BO60830 172 aa6.3□□□□□ -1.4
NIP7-202ENST00000254941 SRSF9Q13242 221 aaKnown RBP eCLIP6.3□□□□□ -1.4
NIP7-202ENST00000254941 CEND1Q8N111 149 aa6.3□□□□□ -1.4
NIP7-202ENST00000254941 TM2D2Q9BX73 214 aa6.3□□□□□ -1.4
NIP7-202ENST00000254941 BATFQ16520 125 aa6.3□□□□□ -1.4
NIP7-202ENST00000254941 LBHQ53QV2 105 aaPredicted RBP6.3□□□□□ -1.4
NIP7-202ENST00000254941 KRTAP1-5Q9BYS1 174 aa6.3□□□□□ -1.4
NIP7-202ENST00000254941 GCSHP23434 173 aa6.29□□□□□ -1.4
NIP7-202ENST00000254941 CXCL5P42830 114 aa6.29□□□□□ -1.4
NIP7-202ENST00000254941 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
NIP7-202ENST00000254941 ADAMTSL4-AS1Q5T5F5 129 aa6.29□□□□□ -1.4
NIP7-202ENST00000254941 RMI2Q96E14 147 aa6.29□□□□□ -1.4
NIP7-202ENST00000254941 FXYD2P54710 66 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 CKS1BP61024 79 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 SPAG11BQ08648 103 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 Q6ZVH6 145 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 SPANXDQ9BXN6 97 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 SPANXCQ9NY87 97 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 C2orf82Q6UX34 121 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 COX11Q9Y6N1 276 aa6.28□□□□□ -1.4
NIP7-202ENST00000254941 TTC32Q5I0X7 151 aa6.27□□□□□ -1.41
NIP7-202ENST00000254941 MEIG1Q5JSS6 88 aa6.27□□□□□ -1.41
NIP7-202ENST00000254941 NBDYA0A0U1RRE5 68 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 CASC10Q5T4H9 136 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
NIP7-202ENST00000254941 GVQW2A0A096LPI5 108 aaPredicted RBP6.26□□□□□ -1.41
NIP7-202ENST00000254941 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 SMIM13P0DJ93 91 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 PTTG1IPP53801 180 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 LINC00526Q96FQ7 95 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
NIP7-202ENST00000254941 A0A0U1RRA0 63 aa6.25□□□□□ -1.41
NIP7-202ENST00000254941 TMEM238LA0A1B0GVL6 79 aa6.25□□□□□ -1.41
NIP7-202ENST00000254941 A6NDN8 102 aa6.25□□□□□ -1.41
NIP7-202ENST00000254941 A6NJY4 79 aa6.25□□□□□ -1.41
NIP7-202ENST00000254941 MUSTN1Q8IVN3 82 aa6.25□□□□□ -1.41
NIP7-202ENST00000254941 DAND5Q8N907 189 aa6.25□□□□□ -1.41
NIP7-202ENST00000254941 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
NIP7-202ENST00000254941 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 C3orf84H3BNL1 204 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 IFITM1P13164 125 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 RPL24P83731 157 aaKnown RBP6.24□□□□□ -1.41
NIP7-202ENST00000254941 KMT2AQ03164 3969 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 COX17Q14061 63 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 HIGD2BQ4VC39 106 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 UNQ6190/PRO20217Q6UXQ8 127 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 C2orf48Q96LS8 159 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 F8WDY8 70 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 LINC00158P58513 81 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
NIP7-202ENST00000254941 A0A1B0GWB2 263 aa6.23□□□□□ -1.41
NIP7-202ENST00000254941 A4D1N5 150 aa6.23□□□□□ -1.41
NIP7-202ENST00000254941 USP17L23D6RBM5 183 aa6.23□□□□□ -1.41
NIP7-202ENST00000254941 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
NIP7-202ENST00000254941 PFN2P35080 140 aa6.23□□□□□ -1.41
NIP7-202ENST00000254941 MIR7-3HGQ8N6C7 128 aa6.23□□□□□ -1.41
NIP7-202ENST00000254941 LINC00308Q8TCZ7 52 aa6.23□□□□□ -1.41
NIP7-202ENST00000254941 COPS9Q8WXC6 57 aa6.23□□□□□ -1.41
NIP7-202ENST00000254941 NHP2Q9NX24 153 aaKnown RBP6.23□□□□□ -1.41
NIP7-202ENST00000254941 NPC2P61916 151 aa6.22□□□□□ -1.41
NIP7-202ENST00000254941 C9orf116Q5BN46 136 aaPredicted RBP6.22□□□□□ -1.41
NIP7-202ENST00000254941 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
NIP7-202ENST00000254941 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
NIP7-202ENST00000254941 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
NIP7-202ENST00000254941 PGPEP1Q9NXJ5 209 aa6.22□□□□□ -1.41
NIP7-202ENST00000254941 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
NIP7-202ENST00000254941 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
NIP7-202ENST00000254941 PSCAO43653 123 aa6.21□□□□□ -1.42
NIP7-202ENST00000254941 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
NIP7-202ENST00000254941 CFC1P0CG37 223 aa6.21□□□□□ -1.42
NIP7-202ENST00000254941 Q6ZR54 194 aa6.21□□□□□ -1.42
NIP7-202ENST00000254941 Q6ZRN7 208 aaPredicted RBP6.21□□□□□ -1.42
NIP7-202ENST00000254941 Q6ZRU5 148 aa6.21□□□□□ -1.42
NIP7-202ENST00000254941 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.2□□□□□ -1.42
NIP7-202ENST00000254941 K7ERJ3 54 aa6.2□□□□□ -1.42
NIP7-202ENST00000254941 LINC00476Q8WZB0 136 aa6.2□□□□□ -1.42
NIP7-202ENST00000254941 LOC107984156A0A0G2JMH3 177 aa6.19□□□□□ -1.42
NIP7-202ENST00000254941 M0R2N4 97 aa6.19□□□□□ -1.42
NIP7-202ENST00000254941 LECT2O14960 151 aa6.19□□□□□ -1.42
NIP7-202ENST00000254941 LY6G6CO95867 125 aa6.19□□□□□ -1.42
NIP7-202ENST00000254941 SYCNQ0VAF6 134 aa6.19□□□□□ -1.42
NIP7-202ENST00000254941 ARL17AQ8IVW1 177 aa6.19□□□□□ -1.42
NIP7-202ENST00000254941 A0A0B4J2C4 111 aa6.19□□□□□ -1.42
NIP7-202ENST00000254941 SLPIP03973 132 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms