RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SLPIP03973 132 aa10.52□□□□□ -0.72
UBE4B-201ENST00000253251 TMEM258P61165 79 aa10.52□□□□□ -0.72
UBE4B-201ENST00000253251 IGKV2-28A0A075B6P5 120 aa10.52□□□□□ -0.73
UBE4B-201ENST00000253251 IGKV2D-28P01615 120 aa10.52□□□□□ -0.73
UBE4B-201ENST00000253251 WFDC10BQ8IUB3 73 aa10.52□□□□□ -0.73
UBE4B-201ENST00000253251 LINC01556Q5JQF7 62 aa10.52□□□□□ -0.73
UBE4B-201ENST00000253251 AGRNO00468 2067 aa10.52□□□□□ -0.73
UBE4B-201ENST00000253251 CELA1Q9UNI1 258 aa10.51□□□□□ -0.73
UBE4B-201ENST00000253251 HTTP42858 3142 aa10.51□□□□□ -0.73
UBE4B-201ENST00000253251 ACANP16112 2415 aa10.5□□□□□ -0.73
UBE4B-201ENST00000253251 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
UBE4B-201ENST00000253251 B5MCH6 92 aa10.49□□□□□ -0.73
UBE4B-201ENST00000253251 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
UBE4B-201ENST00000253251 SS18L2Q9UHA2 77 aa10.49□□□□□ -0.73
UBE4B-201ENST00000253251 IGHV3OR16-9A0A0B4J2B5 98 aa10.48□□□□□ -0.73
UBE4B-201ENST00000253251 ADAMTSL4-AS1Q5T5F5 129 aa10.48□□□□□ -0.73
UBE4B-201ENST00000253251 CCKP06307 115 aa10.47□□□□□ -0.73
UBE4B-201ENST00000253251 H0Y9J4 135 aa10.46□□□□□ -0.73
UBE4B-201ENST00000253251 M0QXV9 152 aa10.46□□□□□ -0.73
UBE4B-201ENST00000253251 PLAC8L1A1L4L8 177 aa10.46□□□□□ -0.74
UBE4B-201ENST00000253251 UPK3BQ9BT76 320 aa10.46□□□□□ -0.74
UBE4B-201ENST00000253251 Q8NAQ8 132 aa10.46□□□□□ -0.74
UBE4B-201ENST00000253251 TRBV10-3A0A0K0K1G6 114 aa10.45□□□□□ -0.74
UBE4B-201ENST00000253251 KRTAP1-3Q8IUG1 177 aa10.45□□□□□ -0.74
UBE4B-201ENST00000253251 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-201ENST00000253251 IMUPQ9GZP8 106 aa10.45□□□□□ -0.74
UBE4B-201ENST00000253251 C6orf223Q8N319 242 aa10.44□□□□□ -0.74
UBE4B-201ENST00000253251 TRANK1O15050 2925 aa10.44□□□□□ -0.74
UBE4B-201ENST00000253251 RPL37AP8A6NKH3 93 aa10.43□□□□□ -0.74
UBE4B-201ENST00000253251 J3KT08 172 aa10.43□□□□□ -0.74
UBE4B-201ENST00000253251 PRYO14603 147 aa10.43□□□□□ -0.74
UBE4B-201ENST00000253251 Q8N814 137 aa10.43□□□□□ -0.74
UBE4B-201ENST00000253251 NDUFV3P56181 108 aaKnown RBP10.42□□□□□ -0.74
UBE4B-201ENST00000253251 C1orf134Q5TEV5 83 aa10.42□□□□□ -0.74
UBE4B-201ENST00000253251 FAM240AA0A1B0GVK7 77 aa10.42□□□□□ -0.74
UBE4B-201ENST00000253251 REG3GQ6UW15 175 aa10.42□□□□□ -0.74
UBE4B-201ENST00000253251 ESRGQ1W209 222 aa10.42□□□□□ -0.74
UBE4B-201ENST00000253251 F8P00451 2351 aa10.4□□□□□ -0.74
UBE4B-201ENST00000253251 SBSPONQ8IVN8 264 aa10.4□□□□□ -0.74
UBE4B-201ENST00000253251 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
UBE4B-201ENST00000253251 A0A096LNI7 61 aa10.39□□□□□ -0.75
UBE4B-201ENST00000253251 Q6ZRU5 148 aa10.39□□□□□ -0.75
UBE4B-201ENST00000253251 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
UBE4B-201ENST00000253251 MRPL55Q7Z7F7 128 aaKnown RBP10.37□□□□□ -0.75
UBE4B-201ENST00000253251 MT-ATP8P03928 68 aa10.36□□□□□ -0.75
UBE4B-201ENST00000253251 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
UBE4B-201ENST00000253251 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
UBE4B-201ENST00000253251 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
UBE4B-201ENST00000253251 Q6JHZ5 121 aa10.35□□□□□ -0.75
UBE4B-201ENST00000253251 MUC4Q99102 2169 aa10.35□□□□□ -0.75
UBE4B-201ENST00000253251 ENHOQ6UWT2 76 aa10.34□□□□□ -0.75
UBE4B-201ENST00000253251 C10orf25Q5T742 122 aa10.34□□□□□ -0.75
UBE4B-201ENST00000253251 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
UBE4B-201ENST00000253251 PRRC2CQ9Y520 2896 aaKnown RBP10.33□□□□□ -0.76
UBE4B-201ENST00000253251 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
UBE4B-201ENST00000253251 C19orf73Q9NVV2 129 aa10.33□□□□□ -0.76
UBE4B-201ENST00000253251 MDFIQ99750 246 aa10.33□□□□□ -0.76
UBE4B-201ENST00000253251 LINC00575Q6W349 94 aa10.32□□□□□ -0.76
UBE4B-201ENST00000253251 UQCRQO14949 82 aa10.32□□□□□ -0.76
UBE4B-201ENST00000253251 C3orf84H3BNL1 204 aa10.31□□□□□ -0.76
UBE4B-201ENST00000253251 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
UBE4B-201ENST00000253251 A0A087WYN8 130 aa10.31□□□□□ -0.76
UBE4B-201ENST00000253251 Q9UF83 564 aa10.31□□□□□ -0.76
UBE4B-201ENST00000253251 FAM19A3Q7Z5A8 133 aa10.3□□□□□ -0.76
UBE4B-201ENST00000253251 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
UBE4B-201ENST00000253251 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
UBE4B-201ENST00000253251 TRBV7-6A0A0J9YX20 115 aa10.28□□□□□ -0.76
UBE4B-201ENST00000253251 Q6Q795 121 aa10.28□□□□□ -0.76
UBE4B-201ENST00000253251 CHKB-CPT1BH3BT56 60 aa10.27□□□□□ -0.76
UBE4B-201ENST00000253251 SCXQ7RTU7 201 aa10.27□□□□□ -0.76
UBE4B-201ENST00000253251 DNAH10OSP0CZ25 163 aa10.27□□□□□ -0.77
UBE4B-201ENST00000253251 KRTAP10-3P60369 221 aa10.27□□□□□ -0.77
UBE4B-201ENST00000253251 C6orf48Q9UBA6 75 aa10.27□□□□□ -0.77
UBE4B-201ENST00000253251 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
UBE4B-201ENST00000253251 C22orf24Q9Y442 160 aa10.26□□□□□ -0.77
UBE4B-201ENST00000253251 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
UBE4B-201ENST00000253251 FLNBO75369 2602 aaKnown RBP10.26□□□□□ -0.77
UBE4B-201ENST00000253251 GIG44P09565 113 aaPredicted RBP10.25□□□□□ -0.77
UBE4B-201ENST00000253251 IGLV9-49A0A0B4J1Y8 123 aa10.25□□□□□ -0.77
UBE4B-201ENST00000253251 IGKV4-1P06312 121 aa10.25□□□□□ -0.77
UBE4B-201ENST00000253251 LINC00588Q9Y4M8 146 aa10.25□□□□□ -0.77
UBE4B-201ENST00000253251 ZNF292O60281 2723 aa10.25□□□□□ -0.77
UBE4B-201ENST00000253251 NBDYA0A0U1RRE5 68 aa10.23□□□□□ -0.77
UBE4B-201ENST00000253251 SERP2Q8N6R1 65 aa10.23□□□□□ -0.77
UBE4B-201ENST00000253251 NDUFC1O43677 76 aa10.23□□□□□ -0.77
UBE4B-201ENST00000253251 C20orf197Q8N268 126 aa10.22□□□□□ -0.77
UBE4B-201ENST00000253251 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
UBE4B-201ENST00000253251 KRTAP10-11P60412 298 aa10.22□□□□□ -0.77
UBE4B-201ENST00000253251 Q9BRP9 147 aa10.21□□□□□ -0.77
UBE4B-201ENST00000253251 K7EIL1 84 aa10.21□□□□□ -0.78
UBE4B-201ENST00000253251 C5orf47Q569G3 176 aa10.21□□□□□ -0.78
UBE4B-201ENST00000253251 XGP55808 180 aa10.21□□□□□ -0.78
UBE4B-201ENST00000253251 SPATA3Q8NHX4 192 aa10.19□□□□□ -0.78
UBE4B-201ENST00000253251 SOSTDC1Q6X4U4 206 aa10.18□□□□□ -0.78
UBE4B-201ENST00000253251 WWC2-AS2Q96NR7 200 aa10.18□□□□□ -0.78
UBE4B-201ENST00000253251 RANBP2P49792 3224 aaKnown RBP10.18□□□□□ -0.78
UBE4B-201ENST00000253251 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
UBE4B-201ENST00000253251 ATP5EP56381 51 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-201ENST00000253251 A0A1B0GW54 56 aa10.17□□□□□ -0.78
UBE4B-201ENST00000253251 LINC00167Q96N53 147 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms