RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 LYPD5Q6UWN5 251 aa12.02□□□□□ -0.48
ACTN4-201ENST00000252699 TRAV23DV6A0A075B6W5 121 aa12.02□□□□□ -0.48
ACTN4-201ENST00000252699 LY6G6CO95867 125 aa12.02□□□□□ -0.49
ACTN4-201ENST00000252699 PDE6GP18545 87 aa12.02□□□□□ -0.49
ACTN4-201ENST00000252699 WFDC10BQ8IUB3 73 aa12.01□□□□□ -0.49
ACTN4-201ENST00000252699 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
ACTN4-201ENST00000252699 M0R378 163 aa12□□□□□ -0.49
ACTN4-201ENST00000252699 NUPR2A6NF83 97 aa12□□□□□ -0.49
ACTN4-201ENST00000252699 SMIM11BQ8TCY0 68 aa12□□□□□ -0.49
ACTN4-201ENST00000252699 Q9UF83 564 aa11.99□□□□□ -0.49
ACTN4-201ENST00000252699 MUC7Q8TAX7 377 aa11.99□□□□□ -0.49
ACTN4-201ENST00000252699 NTM-AS1Q6ZSK4 140 aa11.98□□□□□ -0.49
ACTN4-201ENST00000252699 X6R8D5 127 aa11.98□□□□□ -0.49
ACTN4-201ENST00000252699 ADAMTSL4-AS1Q5T5F5 129 aa11.98□□□□□ -0.49
ACTN4-201ENST00000252699 EGFEM1PQ0D2K5 195 aa11.98□□□□□ -0.49
ACTN4-201ENST00000252699 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
ACTN4-201ENST00000252699 A0A096LNI7 61 aa11.97□□□□□ -0.49
ACTN4-201ENST00000252699 LST1O00453 97 aa11.97□□□□□ -0.49
ACTN4-201ENST00000252699 LINC01546A6NGU7 62 aa11.97□□□□□ -0.49
ACTN4-201ENST00000252699 Q6ZQY7 126 aa11.96□□□□□ -0.49
ACTN4-201ENST00000252699 MAP1AP78559 2803 aaPredicted RBP11.96□□□□□ -0.5
ACTN4-201ENST00000252699 NDUFB1O75438 58 aa11.95□□□□□ -0.5
ACTN4-201ENST00000252699 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
ACTN4-201ENST00000252699 NDUFS5O43920 106 aa11.94□□□□□ -0.5
ACTN4-201ENST00000252699 RPL37AP8A6NKH3 93 aa11.94□□□□□ -0.5
ACTN4-201ENST00000252699 USP17L23D6RBM5 183 aa11.93□□□□□ -0.5
ACTN4-201ENST00000252699 FAM236AA0A1B0GUQ0 79 aa11.92□□□□□ -0.5
ACTN4-201ENST00000252699 FAM236BA0A1B0GV22 79 aa11.92□□□□□ -0.5
ACTN4-201ENST00000252699 ZNF73O43830 326 aaPredicted RBP11.92□□□□□ -0.5
ACTN4-201ENST00000252699 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
ACTN4-201ENST00000252699 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
ACTN4-201ENST00000252699 C4orf48Q5BLP8 95 aa11.92□□□□□ -0.5
ACTN4-201ENST00000252699 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
ACTN4-201ENST00000252699 LAMA1P25391 3075 aa11.91□□□□□ -0.5
ACTN4-201ENST00000252699 PRR3P79522 188 aaKnown RBP11.91□□□□□ -0.5
ACTN4-201ENST00000252699 IGSF10Q6WRI0 2623 aa11.9□□□□□ -0.5
ACTN4-201ENST00000252699 A0A1B0GX51 115 aa11.89□□□□□ -0.51
ACTN4-201ENST00000252699 TEP1Q99973 2627 aaKnown RBP11.89□□□□□ -0.51
ACTN4-201ENST00000252699 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
ACTN4-201ENST00000252699 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
ACTN4-201ENST00000252699 SBSPONQ8IVN8 264 aa11.88□□□□□ -0.51
ACTN4-201ENST00000252699 TRBV10-3A0A0K0K1G6 114 aa11.87□□□□□ -0.51
ACTN4-201ENST00000252699 NHLRC4P0CG21 123 aaPredicted RBP11.87□□□□□ -0.51
ACTN4-201ENST00000252699 DHRS4-AS1Q9P1J3 65 aa11.87□□□□□ -0.51
ACTN4-201ENST00000252699 ATOX1O00244 68 aa11.86□□□□□ -0.51
ACTN4-201ENST00000252699 BPY2O14599 106 aa11.86□□□□□ -0.51
ACTN4-201ENST00000252699 ESRGQ1W209 222 aa11.86□□□□□ -0.51
ACTN4-201ENST00000252699 IGLV5-39A0A0G2JS06 123 aa11.85□□□□□ -0.51
ACTN4-201ENST00000252699 LINC01561Q8N1V8 128 aa11.85□□□□□ -0.51
ACTN4-201ENST00000252699 Q8NAQ8 132 aa11.85□□□□□ -0.51
ACTN4-201ENST00000252699 C7orf33Q8WU49 177 aa11.85□□□□□ -0.51
ACTN4-201ENST00000252699 NDUFC2-KCTD14E9PQ53 114 aa11.85□□□□□ -0.51
ACTN4-201ENST00000252699 CCKP06307 115 aa11.85□□□□□ -0.51
ACTN4-201ENST00000252699 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
ACTN4-201ENST00000252699 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
ACTN4-201ENST00000252699 A8MTW9 85 aa11.84□□□□□ -0.51
ACTN4-201ENST00000252699 KRTAP1-1Q07627 177 aa11.84□□□□□ -0.51
ACTN4-201ENST00000252699 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
ACTN4-201ENST00000252699 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
ACTN4-201ENST00000252699 H0Y9J4 135 aa11.82□□□□□ -0.52
ACTN4-201ENST00000252699 MT-ATP8P03928 68 aa11.82□□□□□ -0.52
ACTN4-201ENST00000252699 VCANP13611 3396 aa11.82□□□□□ -0.52
ACTN4-201ENST00000252699 M0QXV9 152 aa11.82□□□□□ -0.52
ACTN4-201ENST00000252699 LINC01556Q5JQF7 62 aa11.81□□□□□ -0.52
ACTN4-201ENST00000252699 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.81□□□□□ -0.52
ACTN4-201ENST00000252699 Q6ZRU5 148 aa11.81□□□□□ -0.52
ACTN4-201ENST00000252699 B5MCH6 92 aa11.8□□□□□ -0.52
ACTN4-201ENST00000252699 SDIM1Q6ZPB5 146 aa11.8□□□□□ -0.52
ACTN4-201ENST00000252699 KRTAP10-3P60369 221 aa11.8□□□□□ -0.52
ACTN4-201ENST00000252699 COL6A3P12111 3177 aa11.79□□□□□ -0.52
ACTN4-201ENST00000252699 SCXQ7RTU7 201 aa11.79□□□□□ -0.52
ACTN4-201ENST00000252699 H3BNG1 76 aa11.79□□□□□ -0.52
ACTN4-201ENST00000252699 UPK3BQ9BT76 320 aa11.79□□□□□ -0.52
ACTN4-201ENST00000252699 PLAC8L1A1L4L8 177 aa11.78□□□□□ -0.52
ACTN4-201ENST00000252699 NDUFC2O95298 119 aa11.78□□□□□ -0.52
ACTN4-201ENST00000252699 CSNK1G2-AS1Q8NCQ2 148 aa11.78□□□□□ -0.52
ACTN4-201ENST00000252699 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
ACTN4-201ENST00000252699 F8WDY8 70 aa11.77□□□□□ -0.52
ACTN4-201ENST00000252699 C3orf84H3BNL1 204 aa11.77□□□□□ -0.52
ACTN4-201ENST00000252699 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.52
ACTN4-201ENST00000252699 MP68P56378 58 aa11.76□□□□□ -0.53
ACTN4-201ENST00000252699 Q8N814 137 aa11.76□□□□□ -0.53
ACTN4-201ENST00000252699 C19orf73Q9NVV2 129 aa11.76□□□□□ -0.53
ACTN4-201ENST00000252699 Q8N3U1 123 aa11.76□□□□□ -0.53
ACTN4-201ENST00000252699 LINC00337Q8N6G1 96 aa11.75□□□□□ -0.53
ACTN4-201ENST00000252699 A0A087WYN8 130 aa11.75□□□□□ -0.53
ACTN4-201ENST00000252699 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
ACTN4-201ENST00000252699 CHD6Q8TD26 2715 aa11.74□□□□□ -0.53
ACTN4-201ENST00000252699 CELSR3Q9NYQ7 3312 aa11.74□□□□□ -0.53
ACTN4-201ENST00000252699 ENHOQ6UWT2 76 aa11.74□□□□□ -0.53
ACTN4-201ENST00000252699 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
ACTN4-201ENST00000252699 ATP5EP2Q5VTU8 51 aa11.73□□□□□ -0.53
ACTN4-201ENST00000252699 C1orf134Q5TEV5 83 aa11.71□□□□□ -0.53
ACTN4-201ENST00000252699 ZNF706Q9Y5V0 76 aaPredicted RBP11.71□□□□□ -0.53
ACTN4-201ENST00000252699 IGLV5-52A0A0A0MRZ9 124 aa11.71□□□□□ -0.53
ACTN4-201ENST00000252699 SMIM20Q8N5G0 67 aa11.71□□□□□ -0.53
ACTN4-201ENST00000252699 MDFIQ99750 246 aa11.71□□□□□ -0.54
ACTN4-201ENST00000252699 REG3GQ6UW15 175 aa11.7□□□□□ -0.54
ACTN4-201ENST00000252699 FRYQ5TBA9 3013 aa11.69□□□□□ -0.54
ACTN4-201ENST00000252699 MRPL55Q7Z7F7 128 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms