RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 ETDBQ3ZM63 59 aa12.73□□□□□ -0.37
TUBA4A-201ENST00000248437 Q8IZM0 81 aa12.73□□□□□ -0.37
TUBA4A-201ENST00000248437 SMCPP49901 116 aaPredicted RBP12.72□□□□□ -0.37
TUBA4A-201ENST00000248437 DNHD1Q96M86 4753 aa12.72□□□□□ -0.37
TUBA4A-201ENST00000248437 COX6CP09669 75 aa12.71□□□□□ -0.37
TUBA4A-201ENST00000248437 ATXN8Q156A1 80 aa12.71□□□□□ -0.37
TUBA4A-201ENST00000248437 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
TUBA4A-201ENST00000248437 Q8N3U1 123 aa12.7□□□□□ -0.38
TUBA4A-201ENST00000248437 MIR7-3HGQ8N6C7 128 aa12.7□□□□□ -0.38
TUBA4A-201ENST00000248437 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
TUBA4A-201ENST00000248437 COX7A2LO14548 114 aa12.69□□□□□ -0.38
TUBA4A-201ENST00000248437 LYPD5Q6UWN5 251 aa12.69□□□□□ -0.38
TUBA4A-201ENST00000248437 VPS25Q9BRG1 176 aa12.69□□□□□ -0.38
TUBA4A-201ENST00000248437 M0QXV9 152 aa12.68□□□□□ -0.38
TUBA4A-201ENST00000248437 LINC00158P58513 81 aa12.68□□□□□ -0.38
TUBA4A-201ENST00000248437 J3QR89 54 aa12.67□□□□□ -0.38
TUBA4A-201ENST00000248437 Q6ZTC4 211 aa12.67□□□□□ -0.38
TUBA4A-201ENST00000248437 PRR34Q9NV39 138 aa12.67□□□□□ -0.38
TUBA4A-201ENST00000248437 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
TUBA4A-201ENST00000248437 CXCL5P42830 114 aa12.66□□□□□ -0.38
TUBA4A-201ENST00000248437 IGLV10-54A0A075B6I4 117 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 C9JAW5 83 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 SLC25A20O43772 301 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 FOXI1Q12951 378 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 LINC01620Q4KN68 170 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 KIAA0087Q14695 138 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 TEN1Q86WV5 123 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 SND1-IT1Q9HBX3 110 aa12.64□□□□□ -0.39
TUBA4A-201ENST00000248437 TRAV13-2A0A0B4J235 113 aa12.63□□□□□ -0.39
TUBA4A-201ENST00000248437 A0A0J9YWU9 116 aa12.63□□□□□ -0.39
TUBA4A-201ENST00000248437 MALP21145 153 aa12.63□□□□□ -0.39
TUBA4A-201ENST00000248437 PFN2P35080 140 aa12.63□□□□□ -0.39
TUBA4A-201ENST00000248437 CKS1BP61024 79 aa12.63□□□□□ -0.39
TUBA4A-201ENST00000248437 CCL18P55774 89 aa12.62□□□□□ -0.39
TUBA4A-201ENST00000248437 CFAP161Q6P656 301 aa12.62□□□□□ -0.39
TUBA4A-201ENST00000248437 KLK12Q9UKR0 248 aa12.62□□□□□ -0.39
TUBA4A-201ENST00000248437 K7EIL1 84 aa12.62□□□□□ -0.39
TUBA4A-201ENST00000248437 LST1O00453 97 aa12.62□□□□□ -0.39
TUBA4A-201ENST00000248437 TENM3Q9P273 2699 aa12.61□□□□□ -0.39
TUBA4A-201ENST00000248437 CRPP02741 224 aa12.6□□□□□ -0.39
TUBA4A-201ENST00000248437 C2orf82Q6UX34 121 aa12.6□□□□□ -0.39
TUBA4A-201ENST00000248437 C11orf45Q8TAV5 145 aa12.6□□□□□ -0.39
TUBA4A-201ENST00000248437 TRBV10-2A0A0K0K1G8 114 aa12.6□□□□□ -0.39
TUBA4A-201ENST00000248437 COX17Q14061 63 aa12.6□□□□□ -0.39
TUBA4A-201ENST00000248437 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 GAGE12HA6NDE8 117 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 ENHOQ6UWT2 76 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 ANKRD29Q8N6D5 301 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 PPDPFLQ8WWR9 84 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 CLEC2BQ92478 149 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 KLK5Q9Y337 293 aaPredicted RBP12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 TRAV8-4A0A0B4J246 113 aa12.59□□□□□ -0.39
TUBA4A-201ENST00000248437 NANOS2P60321 138 aaKnown RBP12.58□□□□□ -0.4
TUBA4A-201ENST00000248437 LINC00337Q8N6G1 96 aa12.57□□□□□ -0.4
TUBA4A-201ENST00000248437 DEFB131BA0A096LNP1 70 aa12.57□□□□□ -0.4
TUBA4A-201ENST00000248437 SPATA25Q9BR10 227 aa12.57□□□□□ -0.4
TUBA4A-201ENST00000248437 WFDC10BQ8IUB3 73 aa12.56□□□□□ -0.4
TUBA4A-201ENST00000248437 RPL28P46779 137 aaKnown RBP12.56□□□□□ -0.4
TUBA4A-201ENST00000248437 H3BT86 120 aa12.55□□□□□ -0.4
TUBA4A-201ENST00000248437 DEFB121Q5J5C9 76 aa12.55□□□□□ -0.4
TUBA4A-201ENST00000248437 MRAPQ8TCY5 172 aa12.54□□□□□ -0.4
TUBA4A-201ENST00000248437 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
TUBA4A-201ENST00000248437 SPAG11BQ08648 103 aa12.54□□□□□ -0.4
TUBA4A-201ENST00000248437 UBE2WQ96B02 151 aa12.54□□□□□ -0.4
TUBA4A-201ENST00000248437 TM2D3Q9BRN9 247 aa12.54□□□□□ -0.4
TUBA4A-201ENST00000248437 ESRGQ1W209 222 aa12.53□□□□□ -0.4
TUBA4A-201ENST00000248437 MUC7Q8TAX7 377 aa12.53□□□□□ -0.4
TUBA4A-201ENST00000248437 HUWE1Q7Z6Z7 4374 aaKnown RBP12.52□□□□□ -0.41
TUBA4A-201ENST00000248437 NDUFC2O95298 119 aa12.5□□□□□ -0.41
TUBA4A-201ENST00000248437 TRACP01848 142 aa12.49□□□□□ -0.41
TUBA4A-201ENST00000248437 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
TUBA4A-201ENST00000248437 LINC01556Q5JQF7 62 aa12.49□□□□□ -0.41
TUBA4A-201ENST00000248437 SMIM11BQ8TCY0 68 aa12.49□□□□□ -0.41
TUBA4A-201ENST00000248437 NTN5Q8WTR8 489 aaPredicted RBP12.49□□□□□ -0.41
TUBA4A-201ENST00000248437 GVQW2A0A096LPI5 108 aaPredicted RBP12.47□□□□□ -0.41
TUBA4A-201ENST00000248437 C9orf116Q5BN46 136 aaPredicted RBP12.47□□□□□ -0.41
TUBA4A-201ENST00000248437 UNQ6190/PRO20217Q6UXQ8 127 aa12.47□□□□□ -0.41
TUBA4A-201ENST00000248437 C6orf223Q8N319 242 aa12.47□□□□□ -0.41
TUBA4A-201ENST00000248437 C15orf53Q8NAA6 179 aa12.47□□□□□ -0.41
TUBA4A-201ENST00000248437 KRTAP26-1Q6PEX3 210 aa12.46□□□□□ -0.41
TUBA4A-201ENST00000248437 C10orf25Q5T742 122 aa12.46□□□□□ -0.42
TUBA4A-201ENST00000248437 H0YGX0 51 aa12.45□□□□□ -0.42
TUBA4A-201ENST00000248437 OR13C6PQ8NH95 151 aa12.45□□□□□ -0.42
TUBA4A-201ENST00000248437 FAM218AQ96MZ4 157 aa12.44□□□□□ -0.42
TUBA4A-201ENST00000248437 DNAH9Q9NYC9 4486 aa12.43□□□□□ -0.42
TUBA4A-201ENST00000248437 LINC00526Q96FQ7 95 aa12.43□□□□□ -0.42
TUBA4A-201ENST00000248437 TEX49A0A1B0GTD5 131 aa12.42□□□□□ -0.42
TUBA4A-201ENST00000248437 DNAH10OSP0CZ25 163 aa12.42□□□□□ -0.42
TUBA4A-201ENST00000248437 PCP4P48539 62 aa12.42□□□□□ -0.42
TUBA4A-201ENST00000248437 KRTAP21-3Q3LHN1 58 aa12.42□□□□□ -0.42
TUBA4A-201ENST00000248437 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
TUBA4A-201ENST00000248437 C1orf43Q9BWL3 253 aa12.41□□□□□ -0.42
TUBA4A-201ENST00000248437 SIGMAR1Q99720 223 aa12.4□□□□□ -0.42
TUBA4A-201ENST00000248437 TMEM126AQ9H061 195 aa12.4□□□□□ -0.42
TUBA4A-201ENST00000248437 ZNF561-AS1K7EIQ3 104 aa12.39□□□□□ -0.43
TUBA4A-201ENST00000248437 CDIP1Q9H305 208 aa12.39□□□□□ -0.43
TUBA4A-201ENST00000248437 C6orf48Q9UBA6 75 aa12.39□□□□□ -0.43
TUBA4A-201ENST00000248437 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms