RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 LINC01561Q8N1V8 128 aa15.83■□□□□ 0.13
SYNGR3-201ENST00000248121 PRR34Q9NV39 138 aa15.83■□□□□ 0.13
SYNGR3-201ENST00000248121 LOC107984156A0A0G2JMH3 177 aa15.83■□□□□ 0.12
SYNGR3-201ENST00000248121 H3BMG7 143 aa15.83■□□□□ 0.12
SYNGR3-201ENST00000248121 ARL17AQ8IVW1 177 aa15.83■□□□□ 0.12
SYNGR3-201ENST00000248121 KLK12Q9UKR0 248 aa15.83■□□□□ 0.12
SYNGR3-201ENST00000248121 WFDC10BQ8IUB3 73 aa15.82■□□□□ 0.12
SYNGR3-201ENST00000248121 ERG28Q9UKR5 140 aa15.82■□□□□ 0.12
SYNGR3-201ENST00000248121 ESRGQ1W209 222 aa15.81■□□□□ 0.12
SYNGR3-201ENST00000248121 H7C2G1 150 aa15.8■□□□□ 0.12
SYNGR3-201ENST00000248121 FOXI1Q12951 378 aa15.8■□□□□ 0.12
SYNGR3-201ENST00000248121 ENHOQ6UWT2 76 aa15.8■□□□□ 0.12
SYNGR3-201ENST00000248121 COX7A2LO14548 114 aa15.8■□□□□ 0.12
SYNGR3-201ENST00000248121 Q8IZM0 81 aa15.8■□□□□ 0.12
SYNGR3-201ENST00000248121 C6orf226Q5I0X4 101 aa15.79■□□□□ 0.12
SYNGR3-201ENST00000248121 KIAA0087Q14695 138 aa15.78■□□□□ 0.12
SYNGR3-201ENST00000248121 CSMD3Q7Z407 3707 aa15.78■□□□□ 0.12
SYNGR3-201ENST00000248121 C2orf82Q6UX34 121 aa15.77■□□□□ 0.11
SYNGR3-201ENST00000248121 MIR7-3HGQ8N6C7 128 aa15.77■□□□□ 0.11
SYNGR3-201ENST00000248121 IBA57-AS1B1ANH7 110 aa15.75■□□□□ 0.11
SYNGR3-201ENST00000248121 GAGE12HA6NDE8 117 aa15.75■□□□□ 0.11
SYNGR3-201ENST00000248121 TCL1BO95988 128 aa15.75■□□□□ 0.11
SYNGR3-201ENST00000248121 PPDPFQ9H3Y8 114 aa15.75■□□□□ 0.11
SYNGR3-201ENST00000248121 PRO0461Q9UI25 63 aa15.75■□□□□ 0.11
SYNGR3-201ENST00000248121 NHLRC4P0CG21 123 aaPredicted RBP15.74■□□□□ 0.11
SYNGR3-201ENST00000248121 PSMB2P49721 201 aa15.74■□□□□ 0.11
SYNGR3-201ENST00000248121 LINC00158P58513 81 aa15.74■□□□□ 0.11
SYNGR3-201ENST00000248121 Q1RN00 199 aa15.74■□□□□ 0.11
SYNGR3-201ENST00000248121 MTURNQ8N3F0 131 aa15.74■□□□□ 0.11
SYNGR3-201ENST00000248121 COPS9Q8WXC6 57 aa15.74■□□□□ 0.11
SYNGR3-201ENST00000248121 LYSTQ99698 3801 aa15.73■□□□□ 0.11
SYNGR3-201ENST00000248121 MALP21145 153 aa15.72■□□□□ 0.11
SYNGR3-201ENST00000248121 LYRM7Q5U5X0 104 aa15.72■□□□□ 0.11
SYNGR3-201ENST00000248121 PFN2P35080 140 aa15.72■□□□□ 0.11
SYNGR3-201ENST00000248121 UBE2WQ96B02 151 aa15.72■□□□□ 0.11
SYNGR3-201ENST00000248121 TRIAP1O43715 76 aa15.71■□□□□ 0.11
SYNGR3-201ENST00000248121 RPL13AP40429 203 aaKnown RBP15.71■□□□□ 0.11
SYNGR3-201ENST00000248121 FBN3Q75N90 2809 aa15.71■□□□□ 0.11
SYNGR3-201ENST00000248121 TRBV30A0A0K0K1B3 111 aa15.71■□□□□ 0.1
SYNGR3-201ENST00000248121 SCGB1C2P0DMR2 95 aa15.71■□□□□ 0.1
SYNGR3-201ENST00000248121 WFDC2Q14508 124 aa15.71■□□□□ 0.1
SYNGR3-201ENST00000248121 F8W1H4 67 aa15.7■□□□□ 0.1
SYNGR3-201ENST00000248121 C15orf53Q8NAA6 179 aa15.7■□□□□ 0.1
SYNGR3-201ENST00000248121 TRBV20-1A0A075B6N2 111 aa15.69■□□□□ 0.1
SYNGR3-201ENST00000248121 CRPP02741 224 aa15.68■□□□□ 0.1
SYNGR3-201ENST00000248121 CKS1BP61024 79 aa15.68■□□□□ 0.1
SYNGR3-201ENST00000248121 OCIAD2Q56VL3 154 aa15.68■□□□□ 0.1
SYNGR3-201ENST00000248121 LINC00588Q9Y4M8 146 aa15.68■□□□□ 0.1
SYNGR3-201ENST00000248121 CCL18P55774 89 aa15.67■□□□□ 0.1
SYNGR3-201ENST00000248121 KLK5Q9Y337 293 aaPredicted RBP15.67■□□□□ 0.1
SYNGR3-201ENST00000248121 DYNC2H1Q8NCM8 4307 aaKnown RBP15.67■□□□□ 0.1
SYNGR3-201ENST00000248121 TRAV8-4A0A0B4J246 113 aa15.66■□□□□ 0.1
SYNGR3-201ENST00000248121 CFAP161Q6P656 301 aa15.66■□□□□ 0.1
SYNGR3-201ENST00000248121 DNAH7Q8WXX0 4024 aa15.66■□□□□ 0.1
SYNGR3-201ENST00000248121 CXCL5P42830 114 aa15.66■□□□□ 0.1
SYNGR3-201ENST00000248121 SMCPP49901 116 aaPredicted RBP15.66■□□□□ 0.1
SYNGR3-201ENST00000248121 KRTAP26-1Q6PEX3 210 aa15.66■□□□□ 0.1
SYNGR3-201ENST00000248121 LINC01556Q5JQF7 62 aa15.64■□□□□ 0.09
SYNGR3-201ENST00000248121 SND1-IT1Q9HBX3 110 aa15.64■□□□□ 0.09
SYNGR3-201ENST00000248121 IGKV2-28A0A075B6P5 120 aa15.64■□□□□ 0.09
SYNGR3-201ENST00000248121 IGKV2D-28P01615 120 aa15.64■□□□□ 0.09
SYNGR3-201ENST00000248121 C6orf223Q8N319 242 aa15.64■□□□□ 0.09
SYNGR3-201ENST00000248121 SPAG11BQ08648 103 aa15.63■□□□□ 0.09
SYNGR3-201ENST00000248121 LINC00526Q96FQ7 95 aa15.63■□□□□ 0.09
SYNGR3-201ENST00000248121 STARD9Q9P2P6 4700 aa15.62■□□□□ 0.09
SYNGR3-201ENST00000248121 C9orf116Q5BN46 136 aaPredicted RBP15.62■□□□□ 0.09
SYNGR3-201ENST00000248121 C10orf25Q5T742 122 aa15.61■□□□□ 0.09
SYNGR3-201ENST00000248121 LINC00337Q8N6G1 96 aa15.61■□□□□ 0.09
SYNGR3-201ENST00000248121 UNQ6190/PRO20217Q6UXQ8 127 aa15.59■□□□□ 0.09
SYNGR3-201ENST00000248121 APLNQ9ULZ1 77 aa15.59■□□□□ 0.09
SYNGR3-201ENST00000248121 PLECQ15149 4684 aaKnown RBP15.59■□□□□ 0.09
SYNGR3-201ENST00000248121 ETDBQ3ZM63 59 aa15.59■□□□□ 0.09
SYNGR3-201ENST00000248121 DNAH10OSP0CZ25 163 aa15.58■□□□□ 0.08
SYNGR3-201ENST00000248121 COX17Q14061 63 aa15.58■□□□□ 0.08
SYNGR3-201ENST00000248121 CLEC2BQ92478 149 aa15.56■□□□□ 0.08
SYNGR3-201ENST00000248121 COX6CP09669 75 aa15.56■□□□□ 0.08
SYNGR3-201ENST00000248121 ATXN8Q156A1 80 aa15.56■□□□□ 0.08
SYNGR3-201ENST00000248121 TRAV13-2A0A0B4J235 113 aa15.55■□□□□ 0.08
SYNGR3-201ENST00000248121 TENM2Q9NT68 2774 aa15.55■□□□□ 0.08
SYNGR3-201ENST00000248121 NTN5Q8WTR8 489 aaPredicted RBP15.54■□□□□ 0.08
SYNGR3-201ENST00000248121 TGP01266 2768 aa15.53■□□□□ 0.08
SYNGR3-201ENST00000248121 C9JAW5 83 aa15.53■□□□□ 0.08
SYNGR3-201ENST00000248121 K7ERU9 68 aa15.53■□□□□ 0.08
SYNGR3-201ENST00000248121 LINC01620Q4KN68 170 aa15.53■□□□□ 0.08
SYNGR3-201ENST00000248121 DNAH1Q9P2D7 4330 aa15.52■□□□□ 0.08
SYNGR3-201ENST00000248121 C15orf56Q8N910 161 aa15.51■□□□□ 0.07
SYNGR3-201ENST00000248121 C1orf43Q9BWL3 253 aa15.51■□□□□ 0.07
SYNGR3-201ENST00000248121 NUPR2A6NF83 97 aa15.5■□□□□ 0.07
SYNGR3-201ENST00000248121 LST1O00453 97 aa15.5■□□□□ 0.07
SYNGR3-201ENST00000248121 HIGD2BQ4VC39 106 aa15.5■□□□□ 0.07
SYNGR3-201ENST00000248121 SLC25A20O43772 301 aa15.5■□□□□ 0.07
SYNGR3-201ENST00000248121 UPK3BQ9BT76 320 aa15.5■□□□□ 0.07
SYNGR3-201ENST00000248121 C6orf48Q9UBA6 75 aa15.5■□□□□ 0.07
SYNGR3-201ENST00000248121 GVQW2A0A096LPI5 108 aaPredicted RBP15.49■□□□□ 0.07
SYNGR3-201ENST00000248121 IGKV2D-24A0A075B6R9 120 aa15.48■□□□□ 0.07
SYNGR3-201ENST00000248121 RPL28P46779 137 aaKnown RBP15.48■□□□□ 0.07
SYNGR3-201ENST00000248121 Q8NDZ9 215 aa15.48■□□□□ 0.07
SYNGR3-201ENST00000248121 PRR3P79522 188 aaKnown RBP15.47■□□□□ 0.07
SYNGR3-201ENST00000248121 RNF151Q2KHN1 245 aa15.47■□□□□ 0.07
SYNGR3-201ENST00000248121 Q9HAA7 133 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms