RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 LINC00337Q8N6G1 96 aa14.06□□□□□ -0.16
SOX4-201ENST00000244745 FAM19A4Q96LR4 140 aa14.05□□□□□ -0.16
SOX4-201ENST00000244745 LINC00315P59091 139 aa14.05□□□□□ -0.16
SOX4-201ENST00000244745 Q6ZVQ6 151 aa14.05□□□□□ -0.16
SOX4-201ENST00000244745 HIVEP2P31629 2446 aa14.05□□□□□ -0.16
SOX4-201ENST00000244745 PSPHP1O15172 72 aa14.05□□□□□ -0.16
SOX4-201ENST00000244745 EGFEM1PQ0D2K5 195 aa14.04□□□□□ -0.16
SOX4-201ENST00000244745 OXLD1Q5BKU9 147 aa14.04□□□□□ -0.16
SOX4-201ENST00000244745 LINC01547P58512 204 aaPredicted RBP14.04□□□□□ -0.16
SOX4-201ENST00000244745 WDR87Q6ZQQ6 2873 aa14.03□□□□□ -0.16
SOX4-201ENST00000244745 CRYGAP11844 174 aa14.03□□□□□ -0.16
SOX4-201ENST00000244745 IGLV9-49A0A0B4J1Y8 123 aa14.02□□□□□ -0.17
SOX4-201ENST00000244745 SBSPONQ8IVN8 264 aa14.02□□□□□ -0.17
SOX4-201ENST00000244745 Q8N9L7 120 aa14.02□□□□□ -0.17
SOX4-201ENST00000244745 TMEM254Q8TBM7 123 aa14.02□□□□□ -0.17
SOX4-201ENST00000244745 LINC00208Q96KT6 92 aa14.02□□□□□ -0.17
SOX4-201ENST00000244745 A8MTW9 85 aa14.01□□□□□ -0.17
SOX4-201ENST00000244745 PLAC8L1A1L4L8 177 aa14.01□□□□□ -0.17
SOX4-201ENST00000244745 C4orf26Q17RF5 130 aa14.01□□□□□ -0.17
SOX4-201ENST00000244745 C1orf137Q5JT78 98 aa14.01□□□□□ -0.17
SOX4-201ENST00000244745 C11orf72Q8NBR9 251 aa14.01□□□□□ -0.17
SOX4-201ENST00000244745 SPINK6Q6UWN8 80 aa14□□□□□ -0.17
SOX4-201ENST00000244745 CSPG4Q6UVK1 2322 aa14□□□□□ -0.17
SOX4-201ENST00000244745 M0R2N4 97 aa14□□□□□ -0.17
SOX4-201ENST00000244745 LINC00575Q6W349 94 aa14□□□□□ -0.17
SOX4-201ENST00000244745 IGLV5-39A0A0G2JS06 123 aa13.98□□□□□ -0.17
SOX4-201ENST00000244745 A0A1B0GUV1 79 aa13.98□□□□□ -0.17
SOX4-201ENST00000244745 Q8N2B8 174 aa13.98□□□□□ -0.17
SOX4-201ENST00000244745 C16orf95Q9H693 158 aa13.98□□□□□ -0.17
SOX4-201ENST00000244745 PRO0628Q9UI54 55 aa13.98□□□□□ -0.17
SOX4-201ENST00000244745 PTPRBP23467 1997 aa13.96□□□□□ -0.17
SOX4-201ENST00000244745 SORL1Q92673 2214 aa13.95□□□□□ -0.18
SOX4-201ENST00000244745 REG3GQ6UW15 175 aa13.95□□□□□ -0.18
SOX4-201ENST00000244745 FAM218AQ96MZ4 157 aa13.94□□□□□ -0.18
SOX4-201ENST00000244745 CUL9Q8IWT3 2517 aa13.94□□□□□ -0.18
SOX4-201ENST00000244745 PIEZO2Q9H5I5 2752 aa13.94□□□□□ -0.18
SOX4-201ENST00000244745 ZNF706Q9Y5V0 76 aaPredicted RBP13.94□□□□□ -0.18
SOX4-201ENST00000244745 Q6ZTC4 211 aa13.93□□□□□ -0.18
SOX4-201ENST00000244745 CXCL6P80162 114 aa13.93□□□□□ -0.18
SOX4-201ENST00000244745 C10orf25Q5T742 122 aa13.93□□□□□ -0.18
SOX4-201ENST00000244745 COL27A1Q8IZC6 1860 aaPredicted RBP13.93□□□□□ -0.18
SOX4-201ENST00000244745 RPS28P62857 69 aaKnown RBP13.91□□□□□ -0.18
SOX4-201ENST00000244745 LINC01561Q8N1V8 128 aa13.91□□□□□ -0.18
SOX4-201ENST00000244745 ESRGQ1W209 222 aa13.9□□□□□ -0.18
SOX4-201ENST00000244745 LYPD5Q6UWN5 251 aa13.9□□□□□ -0.18
SOX4-201ENST00000244745 ACACBO00763 2458 aa13.9□□□□□ -0.19
SOX4-201ENST00000244745 AGRNO00468 2067 aa13.89□□□□□ -0.19
SOX4-201ENST00000244745 PCSK5Q92824 1860 aa13.89□□□□□ -0.19
SOX4-201ENST00000244745 Q9UF83 564 aa13.89□□□□□ -0.19
SOX4-201ENST00000244745 C7orf33Q8WU49 177 aa13.87□□□□□ -0.19
SOX4-201ENST00000244745 Q6ZRU5 148 aa13.86□□□□□ -0.19
SOX4-201ENST00000244745 H0Y9P7 68 aa13.85□□□□□ -0.19
SOX4-201ENST00000244745 PRRC2AP48634 2157 aaKnown RBP13.85□□□□□ -0.19
SOX4-201ENST00000244745 DEFB116Q30KQ4 102 aa13.84□□□□□ -0.19
SOX4-201ENST00000244745 PCOTHQ58A44 107 aa13.84□□□□□ -0.19
SOX4-201ENST00000244745 LINC00474Q9P2X8 69 aa13.84□□□□□ -0.19
SOX4-201ENST00000244745 CENPFP49454 3210 aa13.84□□□□□ -0.19
SOX4-201ENST00000244745 IGHV3OR16-9A0A0B4J2B5 98 aa13.83□□□□□ -0.2
SOX4-201ENST00000244745 IGLV5-45A0A087WSX0 123 aa13.83□□□□□ -0.2
SOX4-201ENST00000244745 HCG22E2RYF7 251 aa13.83□□□□□ -0.2
SOX4-201ENST00000244745 C2orf48Q96LS8 159 aa13.82□□□□□ -0.2
SOX4-201ENST00000244745 FHL3Q13643 280 aa13.82□□□□□ -0.2
SOX4-201ENST00000244745 SMIM29Q86T20 159 aa13.82□□□□□ -0.2
SOX4-201ENST00000244745 SPATA3Q8NHX4 192 aa13.82□□□□□ -0.2
SOX4-201ENST00000244745 SMCR5Q8TEV8 140 aa13.81□□□□□ -0.2
SOX4-201ENST00000244745 Q9BRP9 147 aa13.8□□□□□ -0.2
SOX4-201ENST00000244745 PTPN13Q12923 2485 aa13.8□□□□□ -0.2
SOX4-201ENST00000244745 F8WDY8 70 aa13.77□□□□□ -0.21
SOX4-201ENST00000244745 A0A087WSZ3 146 aa13.77□□□□□ -0.21
SOX4-201ENST00000244745 BCE1O60756 84 aa13.77□□□□□ -0.21
SOX4-201ENST00000244745 DNAH12Q6ZR08 3092 aa13.76□□□□□ -0.21
SOX4-201ENST00000244745 HIVEP3Q5T1R4 2406 aa13.76□□□□□ -0.21
SOX4-201ENST00000244745 IGHV6-1A0A0B4J1U7 121 aa13.76□□□□□ -0.21
SOX4-201ENST00000244745 LITAFQ99732 161 aa13.74□□□□□ -0.21
SOX4-201ENST00000244745 hDV103S1A0JD37 113 aa13.73□□□□□ -0.21
SOX4-201ENST00000244745 IGF2RP11717 2491 aa13.73□□□□□ -0.21
SOX4-201ENST00000244745 LY6G6CO95867 125 aa13.72□□□□□ -0.21
SOX4-201ENST00000244745 Q6ZQT0 140 aa13.72□□□□□ -0.21
SOX4-201ENST00000244745 KIAA0087Q14695 138 aa13.71□□□□□ -0.21
SOX4-201ENST00000244745 NAV2Q8IVL1 2488 aa13.71□□□□□ -0.21
SOX4-201ENST00000244745 C2CD3Q4AC94 2353 aa13.71□□□□□ -0.22
SOX4-201ENST00000244745 CIRBP-AS1Q8TBR5 109 aa13.7□□□□□ -0.22
SOX4-201ENST00000244745 PRLHP81277 87 aa13.7□□□□□ -0.22
SOX4-201ENST00000244745 C6orf48Q9UBA6 75 aa13.69□□□□□ -0.22
SOX4-201ENST00000244745 C22orf24Q9Y442 160 aa13.69□□□□□ -0.22
SOX4-201ENST00000244745 NHLRC4P0CG21 123 aaPredicted RBP13.67□□□□□ -0.22
SOX4-201ENST00000244745 RETNLBQ9BQ08 111 aa13.67□□□□□ -0.22
SOX4-201ENST00000244745 C1orf64Q8NEQ6 169 aa13.67□□□□□ -0.22
SOX4-201ENST00000244745 LIMD2Q9BT23 127 aa13.67□□□□□ -0.22
SOX4-201ENST00000244745 LOC110117498A0A087WWA1 95 aa13.66□□□□□ -0.22
SOX4-201ENST00000244745 TM2D3Q9BRN9 247 aa13.66□□□□□ -0.22
SOX4-201ENST00000244745 LINC01556Q5JQF7 62 aa13.66□□□□□ -0.22
SOX4-201ENST00000244745 KLK9Q2XQG4 91 aa13.65□□□□□ -0.22
SOX4-201ENST00000244745 NUPR2A6NF83 97 aa13.62□□□□□ -0.23
SOX4-201ENST00000244745 X6R8D5 127 aa13.61□□□□□ -0.23
SOX4-201ENST00000244745 ELOF1P60002 83 aaKnown RBP13.61□□□□□ -0.23
SOX4-201ENST00000244745 IGLV5-52A0A0A0MRZ9 124 aa13.59□□□□□ -0.23
SOX4-201ENST00000244745 FSHBP01225 129 aa13.59□□□□□ -0.23
SOX4-201ENST00000244745 NOTCH2Q04721 2471 aa13.58□□□□□ -0.24
SOX4-201ENST00000244745 LINC00167Q96N53 147 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms