RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CSNK1G2-AS1Q8NCQ2 148 aa8.4□□□□□ -1.07
SEC61A1-201ENST00000243253 RPL28P46779 137 aaKnown RBP8.39□□□□□ -1.07
SEC61A1-201ENST00000243253 FAM222AQ5U5X8 452 aa8.39□□□□□ -1.07
SEC61A1-201ENST00000243253 Q8N3U1 123 aa8.39□□□□□ -1.07
SEC61A1-201ENST00000243253 OBSCN-AS1Q96MR7 158 aa8.39□□□□□ -1.07
SEC61A1-201ENST00000243253 C19orf73Q9NVV2 129 aa8.39□□□□□ -1.07
SEC61A1-201ENST00000243253 TRAV25A0A0B4J276 109 aa8.39□□□□□ -1.07
SEC61A1-201ENST00000243253 SPATA3Q8NHX4 192 aa8.39□□□□□ -1.07
SEC61A1-201ENST00000243253 ATP5G1P05496 136 aa8.38□□□□□ -1.07
SEC61A1-201ENST00000243253 HERV-K104P63124 156 aa8.38□□□□□ -1.07
SEC61A1-201ENST00000243253 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
SEC61A1-201ENST00000243253 IMUPQ9GZP8 106 aa8.38□□□□□ -1.07
SEC61A1-201ENST00000243253 ACYP1P07311 99 aa8.37□□□□□ -1.07
SEC61A1-201ENST00000243253 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
SEC61A1-201ENST00000243253 IGLV4-60A0A075B6I1 120 aa8.37□□□□□ -1.07
SEC61A1-201ENST00000243253 GYPEP15421 78 aa8.36□□□□□ -1.07
SEC61A1-201ENST00000243253 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
SEC61A1-201ENST00000243253 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
SEC61A1-201ENST00000243253 SMIM20Q8N5G0 67 aa8.35□□□□□ -1.07
SEC61A1-201ENST00000243253 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
SEC61A1-201ENST00000243253 OVOL2Q9BRP0 275 aa8.35□□□□□ -1.07
SEC61A1-201ENST00000243253 INAFM1C9JVW0 142 aa8.35□□□□□ -1.07
SEC61A1-201ENST00000243253 HIST1H4AP62805 103 aaKnown RBP8.35□□□□□ -1.07
SEC61A1-201ENST00000243253 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
SEC61A1-201ENST00000243253 CRPP02741 224 aa8.34□□□□□ -1.07
SEC61A1-201ENST00000243253 SLPIP03973 132 aa8.34□□□□□ -1.07
SEC61A1-201ENST00000243253 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
SEC61A1-201ENST00000243253 SS18Q15532 418 aa8.33□□□□□ -1.08
SEC61A1-201ENST00000243253 A0A087WYN8 130 aa8.33□□□□□ -1.08
SEC61A1-201ENST00000243253 BAALC-AS2P0C853 105 aa8.33□□□□□ -1.08
SEC61A1-201ENST00000243253 TMEM86BQ8N661 226 aa8.33□□□□□ -1.08
SEC61A1-201ENST00000243253 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
SEC61A1-201ENST00000243253 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
SEC61A1-201ENST00000243253 COX7B2Q8TF08 81 aa8.32□□□□□ -1.08
SEC61A1-201ENST00000243253 LY6G6DO95868 133 aa8.32□□□□□ -1.08
SEC61A1-201ENST00000243253 LINC00643Q86TS7 51 aa8.32□□□□□ -1.08
SEC61A1-201ENST00000243253 LRRC75A-AS1Q8N1F1 130 aa8.32□□□□□ -1.08
SEC61A1-201ENST00000243253 FHL2Q14192 279 aa8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 ANGP03950 147 aaKnown RBP8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 C9orf116Q5BN46 136 aaPredicted RBP8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 FAM110AQ9BQ89 295 aa8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 A0A087WZ39 114 aa8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 CCL18P55774 89 aa8.31□□□□□ -1.08
SEC61A1-201ENST00000243253 MALP21145 153 aa8.3□□□□□ -1.08
SEC61A1-201ENST00000243253 C2orf48Q96LS8 159 aa8.3□□□□□ -1.08
SEC61A1-201ENST00000243253 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
SEC61A1-201ENST00000243253 CXCL5P42830 114 aa8.3□□□□□ -1.08
SEC61A1-201ENST00000243253 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
SEC61A1-201ENST00000243253 TRBV6-8A0A0A6YYG3 113 aa8.29□□□□□ -1.08
SEC61A1-201ENST00000243253 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
SEC61A1-201ENST00000243253 LINC00612Q8N6U2 182 aa8.29□□□□□ -1.08
SEC61A1-201ENST00000243253 SND1-IT1Q9HBX3 110 aa8.29□□□□□ -1.08
SEC61A1-201ENST00000243253 NANOS2P60321 138 aaKnown RBP8.28□□□□□ -1.08
SEC61A1-201ENST00000243253 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
SEC61A1-201ENST00000243253 J3QKU1 62 aa8.28□□□□□ -1.08
SEC61A1-201ENST00000243253 IGLV1-51P01701 117 aa8.28□□□□□ -1.08
SEC61A1-201ENST00000243253 PRB2P02812 416 aaPredicted RBP8.28□□□□□ -1.08
SEC61A1-201ENST00000243253 LINC00269Q8N2A0 174 aa8.28□□□□□ -1.08
SEC61A1-201ENST00000243253 IBA57-AS1B1ANH7 110 aa8.27□□□□□ -1.09
SEC61A1-201ENST00000243253 C14orf132Q9NPU4 83 aa8.27□□□□□ -1.09
SEC61A1-201ENST00000243253 KRTAP1-1Q07627 177 aa8.26□□□□□ -1.09
SEC61A1-201ENST00000243253 LECT2O14960 151 aa8.26□□□□□ -1.09
SEC61A1-201ENST00000243253 KLK5Q9Y337 293 aaPredicted RBP8.25□□□□□ -1.09
SEC61A1-201ENST00000243253 C9orf153Q5TBE3 101 aa8.25□□□□□ -1.09
SEC61A1-201ENST00000243253 ANK2Q01484 3957 aa8.25□□□□□ -1.09
SEC61A1-201ENST00000243253 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
SEC61A1-201ENST00000243253 C16orf95Q9H693 158 aa8.24□□□□□ -1.09
SEC61A1-201ENST00000243253 INAFM2P0DMQ5 153 aa8.24□□□□□ -1.09
SEC61A1-201ENST00000243253 RETNQ9HD89 108 aa8.24□□□□□ -1.09
SEC61A1-201ENST00000243253 NCR3O14931 201 aa8.23□□□□□ -1.09
SEC61A1-201ENST00000243253 DAD1P61803 113 aa8.23□□□□□ -1.09
SEC61A1-201ENST00000243253 C3orf22Q8N5N4 141 aa8.23□□□□□ -1.09
SEC61A1-201ENST00000243253 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 LINC00846Q9NV44 126 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 KMT2BQ9UMN6 2715 aaPredicted RBP8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 A0A1B0GUV1 79 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 H0YGX0 51 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 KIAA0087Q14695 138 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 Q8NDZ9 215 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 TMEM126AQ9H061 195 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 KRTAP10-3P60369 221 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
SEC61A1-201ENST00000243253 XAGE1AQ9HD64 81 aa8.21□□□□□ -1.1
SEC61A1-201ENST00000243253 C6orf223Q8N319 242 aa8.21□□□□□ -1.1
SEC61A1-201ENST00000243253 KIR2DL5BQ8NHK3 375 aa8.21□□□□□ -1.1
SEC61A1-201ENST00000243253 UQCRQO14949 82 aa8.2□□□□□ -1.1
SEC61A1-201ENST00000243253 Q8IZM0 81 aa8.2□□□□□ -1.1
SEC61A1-201ENST00000243253 LAMTOR3Q9UHA4 124 aa8.2□□□□□ -1.1
SEC61A1-201ENST00000243253 WFDC9Q8NEX5 89 aa8.2□□□□□ -1.1
SEC61A1-201ENST00000243253 MRAPQ8TCY5 172 aa8.2□□□□□ -1.1
SEC61A1-201ENST00000243253 CMC4P56277 68 aaPredicted RBP8.19□□□□□ -1.1
SEC61A1-201ENST00000243253 HIGD2BQ4VC39 106 aa8.19□□□□□ -1.1
SEC61A1-201ENST00000243253 UPK3BQ9BT76 320 aa8.19□□□□□ -1.1
SEC61A1-201ENST00000243253 CELA1Q9UNI1 258 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms