RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 NTM-AS1Q6ZSK4 140 aa10.37□□□□□ -0.75
PRDM4-201ENST00000228437 CRYGAP11844 174 aa10.36□□□□□ -0.75
PRDM4-201ENST00000228437 DEFB121Q5J5C9 76 aa10.36□□□□□ -0.75
PRDM4-201ENST00000228437 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
PRDM4-201ENST00000228437 JMJD7-PLA2G4BH0Y9G9 81 aa10.36□□□□□ -0.75
PRDM4-201ENST00000228437 C9orf116Q5BN46 136 aaPredicted RBP10.36□□□□□ -0.75
PRDM4-201ENST00000228437 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
PRDM4-201ENST00000228437 CYSTM1Q9H1C7 97 aa10.36□□□□□ -0.75
PRDM4-201ENST00000228437 IGLV5-39A0A0G2JS06 123 aa10.35□□□□□ -0.75
PRDM4-201ENST00000228437 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
PRDM4-201ENST00000228437 TRBV10-1A0A0K0K1A3 114 aa10.34□□□□□ -0.75
PRDM4-201ENST00000228437 DEFB114Q30KQ6 69 aa10.34□□□□□ -0.75
PRDM4-201ENST00000228437 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
PRDM4-201ENST00000228437 CHD6Q8TD26 2715 aa10.32□□□□□ -0.76
PRDM4-201ENST00000228437 ITPR1Q14643 2758 aa10.32□□□□□ -0.76
PRDM4-201ENST00000228437 IBA57-AS1B1ANH7 110 aa10.32□□□□□ -0.76
PRDM4-201ENST00000228437 FAM104AQ969W3 186 aa10.32□□□□□ -0.76
PRDM4-201ENST00000228437 IGKV2-28A0A075B6P5 120 aa10.32□□□□□ -0.76
PRDM4-201ENST00000228437 IGKV2D-28P01615 120 aa10.32□□□□□ -0.76
PRDM4-201ENST00000228437 LINC01561Q8N1V8 128 aa10.31□□□□□ -0.76
PRDM4-201ENST00000228437 CELSR1Q9NYQ6 3014 aa10.31□□□□□ -0.76
PRDM4-201ENST00000228437 FHL2Q14192 279 aa10.31□□□□□ -0.76
PRDM4-201ENST00000228437 DEFB105AQ8NG35 78 aa10.31□□□□□ -0.76
PRDM4-201ENST00000228437 CCKP06307 115 aa10.31□□□□□ -0.76
PRDM4-201ENST00000228437 C1orf158Q8N1D5 194 aa10.31□□□□□ -0.76
PRDM4-201ENST00000228437 RMI2Q96E14 147 aa10.3□□□□□ -0.76
PRDM4-201ENST00000228437 CCL24O00175 119 aa10.3□□□□□ -0.76
PRDM4-201ENST00000228437 NBEAL2Q6ZNJ1 2754 aa10.3□□□□□ -0.76
PRDM4-201ENST00000228437 F8WEM9 126 aa10.3□□□□□ -0.76
PRDM4-201ENST00000228437 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
PRDM4-201ENST00000228437 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
PRDM4-201ENST00000228437 ODF3L2Q3SX64 289 aa10.29□□□□□ -0.76
PRDM4-201ENST00000228437 C11orf72Q8NBR9 251 aa10.29□□□□□ -0.76
PRDM4-201ENST00000228437 Q6ZQY7 126 aa10.28□□□□□ -0.76
PRDM4-201ENST00000228437 TRBV6-4A0A1B0GX49 114 aa10.28□□□□□ -0.76
PRDM4-201ENST00000228437 IGLV5-45A0A087WSX0 123 aa10.27□□□□□ -0.76
PRDM4-201ENST00000228437 CFAP46Q8IYW2 2715 aa10.27□□□□□ -0.77
PRDM4-201ENST00000228437 LINC00959A0A1B0GUT2 108 aa10.26□□□□□ -0.77
PRDM4-201ENST00000228437 NDUFC2O95298 119 aa10.26□□□□□ -0.77
PRDM4-201ENST00000228437 C2orf48Q96LS8 159 aa10.26□□□□□ -0.77
PRDM4-201ENST00000228437 ZNF702PQ9H963 129 aa10.26□□□□□ -0.77
PRDM4-201ENST00000228437 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
PRDM4-201ENST00000228437 Q8N814 137 aa10.25□□□□□ -0.77
PRDM4-201ENST00000228437 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
PRDM4-201ENST00000228437 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
PRDM4-201ENST00000228437 KLK9Q2XQG4 91 aa10.24□□□□□ -0.77
PRDM4-201ENST00000228437 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
PRDM4-201ENST00000228437 ZNF843Q8N446 348 aa10.23□□□□□ -0.77
PRDM4-201ENST00000228437 BEAN1Q3B7T3 259 aa10.23□□□□□ -0.77
PRDM4-201ENST00000228437 ZANQ9Y493 2812 aa10.23□□□□□ -0.77
PRDM4-201ENST00000228437 PRORYQ9H606 182 aa10.22□□□□□ -0.77
PRDM4-201ENST00000228437 SPAG11BQ08648 103 aa10.22□□□□□ -0.77
PRDM4-201ENST00000228437 Q8N9L7 120 aa10.21□□□□□ -0.77
PRDM4-201ENST00000228437 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.77
PRDM4-201ENST00000228437 KLK12Q9UKR0 248 aa10.21□□□□□ -0.78
PRDM4-201ENST00000228437 RPS28P62857 69 aaKnown RBP10.21□□□□□ -0.78
PRDM4-201ENST00000228437 Q8N3U1 123 aa10.2□□□□□ -0.78
PRDM4-201ENST00000228437 A0A087WZ39 114 aa10.2□□□□□ -0.78
PRDM4-201ENST00000228437 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
PRDM4-201ENST00000228437 DSCR9P59020 149 aa10.2□□□□□ -0.78
PRDM4-201ENST00000228437 PRR4Q16378 134 aa10.2□□□□□ -0.78
PRDM4-201ENST00000228437 BBC3Q96PG8 261 aaPredicted RBP10.2□□□□□ -0.78
PRDM4-201ENST00000228437 C3orf84H3BNL1 204 aa10.19□□□□□ -0.78
PRDM4-201ENST00000228437 C4orf3Q8WVX3 66 aa10.19□□□□□ -0.78
PRDM4-201ENST00000228437 ATP5EP2Q5VTU8 51 aa10.19□□□□□ -0.78
PRDM4-201ENST00000228437 FLNCQ14315 2725 aa10.19□□□□□ -0.78
PRDM4-201ENST00000228437 TRAV10A0A0B4J240 114 aa10.18□□□□□ -0.78
PRDM4-201ENST00000228437 HELZ2Q9BYK8 2649 aaKnown RBP10.18□□□□□ -0.78
PRDM4-201ENST00000228437 ZNF561-AS1K7EIQ3 104 aa10.18□□□□□ -0.78
PRDM4-201ENST00000228437 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
PRDM4-201ENST00000228437 NREPQ16612 68 aa10.18□□□□□ -0.78
PRDM4-201ENST00000228437 HIGD2BQ4VC39 106 aa10.18□□□□□ -0.78
PRDM4-201ENST00000228437 C6orf223Q8N319 242 aa10.18□□□□□ -0.78
PRDM4-201ENST00000228437 Q6YL49 198 aa10.17□□□□□ -0.78
PRDM4-201ENST00000228437 REG3AQ06141 175 aa10.17□□□□□ -0.78
PRDM4-201ENST00000228437 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
PRDM4-201ENST00000228437 Q6ZVQ6 151 aa10.16□□□□□ -0.78
PRDM4-201ENST00000228437 TRAV7A0A075B6U4 112 aa10.15□□□□□ -0.78
PRDM4-201ENST00000228437 LINC01547P58512 204 aaPredicted RBP10.15□□□□□ -0.78
PRDM4-201ENST00000228437 CELA1Q9UNI1 258 aa10.15□□□□□ -0.78
PRDM4-201ENST00000228437 DIRC1Q969H9 104 aa10.15□□□□□ -0.78
PRDM4-201ENST00000228437 C22orf24Q9Y442 160 aa10.15□□□□□ -0.78
PRDM4-201ENST00000228437 DEFB135Q30KP9 77 aa10.15□□□□□ -0.79
PRDM4-201ENST00000228437 J3QLI3 93 aa10.14□□□□□ -0.79
PRDM4-201ENST00000228437 OXTP01178 125 aa10.14□□□□□ -0.79
PRDM4-201ENST00000228437 SERP1Q9Y6X1 66 aa10.14□□□□□ -0.79
PRDM4-201ENST00000228437 LINC01006Q8NI28 216 aa10.14□□□□□ -0.79
PRDM4-201ENST00000228437 LINC00336Q6ZUF6 198 aa10.13□□□□□ -0.79
PRDM4-201ENST00000228437 LINC00474Q9P2X8 69 aa10.13□□□□□ -0.79
PRDM4-201ENST00000228437 NDUFC2-KCTD14E9PQ53 114 aa10.12□□□□□ -0.79
PRDM4-201ENST00000228437 SMIM26A0A096LP01 95 aa10.12□□□□□ -0.79
PRDM4-201ENST00000228437 LINC00482Q8N8I6 264 aa10.12□□□□□ -0.79
PRDM4-201ENST00000228437 M0R2N4 97 aa10.12□□□□□ -0.79
PRDM4-201ENST00000228437 MIFP14174 115 aa10.12□□□□□ -0.79
PRDM4-201ENST00000228437 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
PRDM4-201ENST00000228437 CAMK2N2Q96S95 79 aa10.11□□□□□ -0.79
PRDM4-201ENST00000228437 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
PRDM4-201ENST00000228437 COX7BP24311 80 aa10.11□□□□□ -0.79
PRDM4-201ENST00000228437 TM2D3Q9BRN9 247 aa10.11□□□□□ -0.79
PRDM4-201ENST00000228437 Q8IZM0 81 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms