RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 UQCRQO14949 82 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 CXCL5P42830 114 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 SS18Q15532 418 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 CSNK1G2-AS1Q8NCQ2 148 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 TMEM126AQ9H061 195 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 ESM1Q9NQ30 184 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
NUP88-201ENST00000225696 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 OBSCN-AS1Q96MR7 158 aa8.63□□□□□ -1.03
NUP88-201ENST00000225696 DNAJC9-AS1A6NH13 148 aa8.62□□□□□ -1.03
NUP88-201ENST00000225696 C16orf74Q96GX8 76 aa8.62□□□□□ -1.03
NUP88-201ENST00000225696 C19orf73Q9NVV2 129 aa8.62□□□□□ -1.03
NUP88-201ENST00000225696 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
NUP88-201ENST00000225696 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
NUP88-201ENST00000225696 XCL1P47992 114 aa8.62□□□□□ -1.03
NUP88-201ENST00000225696 CLPSL2Q6UWE3 100 aa8.62□□□□□ -1.03
NUP88-201ENST00000225696 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
NUP88-201ENST00000225696 COX7CP15954 63 aa8.61□□□□□ -1.03
NUP88-201ENST00000225696 DEFB113Q30KQ7 82 aa8.61□□□□□ -1.03
NUP88-201ENST00000225696 KRTAP1-3Q8IUG1 177 aa8.61□□□□□ -1.03
NUP88-201ENST00000225696 ANK3Q12955 4377 aaKnown RBP8.6□□□□□ -1.03
NUP88-201ENST00000225696 H0YGX0 51 aa8.6□□□□□ -1.03
NUP88-201ENST00000225696 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
NUP88-201ENST00000225696 OVOL2Q9BRP0 275 aa8.6□□□□□ -1.03
NUP88-201ENST00000225696 DEFB130BP0DP73 79 aa8.59□□□□□ -1.03
NUP88-201ENST00000225696 DEFB130AP0DP74 79 aa8.59□□□□□ -1.03
NUP88-201ENST00000225696 A0A096LPF7 62 aa8.59□□□□□ -1.03
NUP88-201ENST00000225696 hADV29S1A0JD25 119 aa8.59□□□□□ -1.03
NUP88-201ENST00000225696 NANOS2P60321 138 aaKnown RBP8.59□□□□□ -1.03
NUP88-201ENST00000225696 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
NUP88-201ENST00000225696 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
NUP88-201ENST00000225696 LY6G6DO95868 133 aa8.57□□□□□ -1.04
NUP88-201ENST00000225696 Q8N3U1 123 aa8.57□□□□□ -1.04
NUP88-201ENST00000225696 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
NUP88-201ENST00000225696 ITPR2Q14571 2701 aa8.56□□□□□ -1.04
NUP88-201ENST00000225696 A0A1B0GX51 115 aa8.56□□□□□ -1.04
NUP88-201ENST00000225696 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
NUP88-201ENST00000225696 Q8NDZ9 215 aa8.56□□□□□ -1.04
NUP88-201ENST00000225696 WFDC11Q8NEX6 87 aa8.56□□□□□ -1.04
NUP88-201ENST00000225696 IGLV1-51P01701 117 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 CRYGAP11844 174 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 C9orf116Q5BN46 136 aaPredicted RBP8.55□□□□□ -1.04
NUP88-201ENST00000225696 Q6JHZ5 121 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 TENM4Q6N022 2769 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 ATOX1O00244 68 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 GYPEP15421 78 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 LINC01006Q8NI28 216 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 ORMDL1Q9P0S3 153 aa8.55□□□□□ -1.04
NUP88-201ENST00000225696 HILS1P60008 231 aa8.54□□□□□ -1.04
NUP88-201ENST00000225696 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
NUP88-201ENST00000225696 TMEM86BQ8N661 226 aa8.53□□□□□ -1.04
NUP88-201ENST00000225696 IGLV10-54A0A075B6I4 117 aa8.52□□□□□ -1.04
NUP88-201ENST00000225696 CCKP06307 115 aa8.52□□□□□ -1.04
NUP88-201ENST00000225696 Q8N814 137 aa8.52□□□□□ -1.04
NUP88-201ENST00000225696 HIVEP2P31629 2446 aa8.52□□□□□ -1.05
NUP88-201ENST00000225696 PDZD2O15018 2839 aa8.52□□□□□ -1.05
NUP88-201ENST00000225696 USP17L23D6RBM5 183 aa8.52□□□□□ -1.05
NUP88-201ENST00000225696 Q8IZM0 81 aa8.52□□□□□ -1.05
NUP88-201ENST00000225696 KIR2DL5BQ8NHK3 375 aa8.52□□□□□ -1.05
NUP88-201ENST00000225696 UPK3BQ9BT76 320 aa8.52□□□□□ -1.05
NUP88-201ENST00000225696 KIAA0087Q14695 138 aa8.51□□□□□ -1.05
NUP88-201ENST00000225696 RNASE1P07998 156 aaKnown RBP8.51□□□□□ -1.05
NUP88-201ENST00000225696 LINC00269Q8N2A0 174 aa8.51□□□□□ -1.05
NUP88-201ENST00000225696 LINC00167Q96N53 147 aa8.51□□□□□ -1.05
NUP88-201ENST00000225696 FAM19A1Q7Z5A9 133 aa8.49□□□□□ -1.05
NUP88-201ENST00000225696 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
NUP88-201ENST00000225696 A0A1B0GUV1 79 aa8.49□□□□□ -1.05
NUP88-201ENST00000225696 SPATA3Q8NHX4 192 aa8.49□□□□□ -1.05
NUP88-201ENST00000225696 DEFB4AO15263 64 aa8.48□□□□□ -1.05
NUP88-201ENST00000225696 TENM1Q9UKZ4 2725 aa8.48□□□□□ -1.05
NUP88-201ENST00000225696 C6orf99Q4VX62 202 aa8.48□□□□□ -1.05
NUP88-201ENST00000225696 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
NUP88-201ENST00000225696 CMC4P56277 68 aaPredicted RBP8.47□□□□□ -1.05
NUP88-201ENST00000225696 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
NUP88-201ENST00000225696 M0R2N4 97 aa8.46□□□□□ -1.05
NUP88-201ENST00000225696 C10orf25Q5T742 122 aa8.46□□□□□ -1.05
NUP88-201ENST00000225696 ENHOQ6UWT2 76 aa8.46□□□□□ -1.05
NUP88-201ENST00000225696 C6orf223Q8N319 242 aa8.46□□□□□ -1.05
NUP88-201ENST00000225696 CHCHD10Q8WYQ3 142 aaPredicted RBP8.46□□□□□ -1.05
NUP88-201ENST00000225696 X6R8D5 127 aa8.46□□□□□ -1.05
NUP88-201ENST00000225696 TRRAPQ9Y4A5 3859 aa8.46□□□□□ -1.06
NUP88-201ENST00000225696 TRAV23DV6A0A075B6W5 121 aa8.46□□□□□ -1.06
NUP88-201ENST00000225696 J3KT08 172 aa8.46□□□□□ -1.06
NUP88-201ENST00000225696 OXTP01178 125 aa8.46□□□□□ -1.06
NUP88-201ENST00000225696 DSCR8Q96T75 97 aa8.45□□□□□ -1.06
NUP88-201ENST00000225696 TMEM256-PLSCR3K7ERE1 68 aa8.45□□□□□ -1.06
NUP88-201ENST00000225696 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
NUP88-201ENST00000225696 CD164L2Q6UWJ8 174 aa8.44□□□□□ -1.06
NUP88-201ENST00000225696 PRO0255Q9UI72 69 aa8.44□□□□□ -1.06
NUP88-201ENST00000225696 JMJD7-PLA2G4BH0Y9G9 81 aa8.44□□□□□ -1.06
NUP88-201ENST00000225696 NDUFC2O95298 119 aa8.44□□□□□ -1.06
NUP88-201ENST00000225696 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
NUP88-201ENST00000225696 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
NUP88-201ENST00000225696 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
NUP88-201ENST00000225696 KRTAP10-3P60369 221 aa8.43□□□□□ -1.06
NUP88-201ENST00000225696 REG3AQ06141 175 aa8.43□□□□□ -1.06
NUP88-201ENST00000225696 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
NUP88-201ENST00000225696 HIVEP1P15822 2718 aa8.42□□□□□ -1.06
NUP88-201ENST00000225696 GHRHP01286 108 aa8.42□□□□□ -1.06
NUP88-201ENST00000225696 LYPD5Q6UWN5 251 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms