RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 TMEM263Q8WUH6 116 aaKnown RBP7.7□□□□□ -1.18
VPS18-201ENST00000220509 Q6ZTI0 123 aa7.69□□□□□ -1.18
VPS18-201ENST00000220509 UPK3BQ9BT76 320 aa7.69□□□□□ -1.18
VPS18-201ENST00000220509 LAMTOR3Q9UHA4 124 aa7.69□□□□□ -1.18
VPS18-201ENST00000220509 C5orf38Q86SI9 138 aa7.69□□□□□ -1.18
VPS18-201ENST00000220509 NIPBLQ6KC79 2804 aaeCLIP7.69□□□□□ -1.18
VPS18-201ENST00000220509 WFDC10AQ9H1F0 79 aa7.69□□□□□ -1.18
VPS18-201ENST00000220509 IGIPA6NJ69 53 aa7.68□□□□□ -1.18
VPS18-201ENST00000220509 M0QY20 66 aa7.68□□□□□ -1.18
VPS18-201ENST00000220509 HILS1P60008 231 aa7.68□□□□□ -1.18
VPS18-201ENST00000220509 XCL1P47992 114 aa7.68□□□□□ -1.18
VPS18-201ENST00000220509 Q9H8V8 135 aa7.68□□□□□ -1.18
VPS18-201ENST00000220509 Q9HAA7 133 aa7.68□□□□□ -1.18
VPS18-201ENST00000220509 TRAV23DV6A0A075B6W5 121 aa7.67□□□□□ -1.18
VPS18-201ENST00000220509 NXPH4O95158 308 aa7.67□□□□□ -1.18
VPS18-201ENST00000220509 CCKP06307 115 aa7.67□□□□□ -1.18
VPS18-201ENST00000220509 COX8CQ7Z4L0 72 aa7.67□□□□□ -1.18
VPS18-201ENST00000220509 CRPP02741 224 aa7.67□□□□□ -1.18
VPS18-201ENST00000220509 ADAMTSL4-AS1Q5T5F5 129 aa7.67□□□□□ -1.18
VPS18-201ENST00000220509 LINC01006Q8NI28 216 aa7.67□□□□□ -1.18
VPS18-201ENST00000220509 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
VPS18-201ENST00000220509 K7EQD1 137 aa7.66□□□□□ -1.18
VPS18-201ENST00000220509 SNURFQ9Y675 71 aa7.66□□□□□ -1.18
VPS18-201ENST00000220509 IGHV4-4A0A075B6R2 117 aa7.66□□□□□ -1.18
VPS18-201ENST00000220509 LINC01546A6NGU7 62 aa7.66□□□□□ -1.18
VPS18-201ENST00000220509 DEFB121Q5J5C9 76 aa7.66□□□□□ -1.18
VPS18-201ENST00000220509 MUC4Q99102 2169 aa7.65□□□□□ -1.18
VPS18-201ENST00000220509 A0A087WZ39 114 aa7.65□□□□□ -1.18
VPS18-201ENST00000220509 SOCS3O14543 225 aa7.65□□□□□ -1.18
VPS18-201ENST00000220509 BAALC-AS2P0C853 105 aa7.65□□□□□ -1.18
VPS18-201ENST00000220509 DEFB135Q30KP9 77 aa7.65□□□□□ -1.18
VPS18-201ENST00000220509 ANGP03950 147 aaKnown RBP7.65□□□□□ -1.18
VPS18-201ENST00000220509 GYPEP15421 78 aa7.65□□□□□ -1.18
VPS18-201ENST00000220509 POLR2KP53803 58 aaKnown RBP7.65□□□□□ -1.18
VPS18-201ENST00000220509 C16orf74Q96GX8 76 aa7.65□□□□□ -1.18
VPS18-201ENST00000220509 INAFM1C9JVW0 142 aa7.65□□□□□ -1.19
VPS18-201ENST00000220509 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
VPS18-201ENST00000220509 F8WEM9 126 aa7.64□□□□□ -1.19
VPS18-201ENST00000220509 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
VPS18-201ENST00000220509 LINC00467Q9BRT7 94 aa7.64□□□□□ -1.19
VPS18-201ENST00000220509 TRBV27A0A0K0K1C4 114 aa7.63□□□□□ -1.19
VPS18-201ENST00000220509 SPTSSBQ8NFR3 76 aa7.63□□□□□ -1.19
VPS18-201ENST00000220509 NBEAL2Q6ZNJ1 2754 aa7.63□□□□□ -1.19
VPS18-201ENST00000220509 IGLV10-54A0A075B6I4 117 aa7.63□□□□□ -1.19
VPS18-201ENST00000220509 MGAM2Q2M2H8 2515 aa7.62□□□□□ -1.19
VPS18-201ENST00000220509 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
VPS18-201ENST00000220509 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
VPS18-201ENST00000220509 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
VPS18-201ENST00000220509 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
VPS18-201ENST00000220509 Q6ZRU5 148 aa7.62□□□□□ -1.19
VPS18-201ENST00000220509 CDKN2A-AS1Q9UH64 79 aa7.62□□□□□ -1.19
VPS18-201ENST00000220509 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
VPS18-201ENST00000220509 C9orf66Q5T8R8 295 aa7.61□□□□□ -1.19
VPS18-201ENST00000220509 ODF3L2Q3SX64 289 aa7.61□□□□□ -1.19
VPS18-201ENST00000220509 PRR26Q8N8Z3 221 aa7.61□□□□□ -1.19
VPS18-201ENST00000220509 COL6A5A8TX70 2615 aa7.61□□□□□ -1.19
VPS18-201ENST00000220509 IGHV1-58A0A0C4DH39 117 aa7.6□□□□□ -1.19
VPS18-201ENST00000220509 MIAQ16674 131 aa7.6□□□□□ -1.19
VPS18-201ENST00000220509 VSIG2Q96IQ7 327 aa7.6□□□□□ -1.19
VPS18-201ENST00000220509 MDFIQ99750 246 aa7.6□□□□□ -1.19
VPS18-201ENST00000220509 TMEM256-PLSCR3K7ERE1 68 aa7.6□□□□□ -1.19
VPS18-201ENST00000220509 PIK3CD-AS1Q5SR53 167 aa7.6□□□□□ -1.19
VPS18-201ENST00000220509 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.6□□□□□ -1.19
VPS18-201ENST00000220509 TRBV6-5A0A0K0K1A5 114 aa7.59□□□□□ -1.19
VPS18-201ENST00000220509 LST1O00453 97 aa7.59□□□□□ -1.19
VPS18-201ENST00000220509 C1orf158Q8N1D5 194 aa7.59□□□□□ -1.19
VPS18-201ENST00000220509 LY6G6DO95868 133 aa7.59□□□□□ -1.19
VPS18-201ENST00000220509 C14orf132Q9NPU4 83 aa7.59□□□□□ -1.19
VPS18-201ENST00000220509 STAB1Q9NY15 2570 aa7.59□□□□□ -1.19
VPS18-201ENST00000220509 C8orf87E5RJ46 101 aa7.58□□□□□ -1.2
VPS18-201ENST00000220509 RMI2Q96E14 147 aa7.58□□□□□ -1.2
VPS18-201ENST00000220509 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
VPS18-201ENST00000220509 BAHCC1Q9P281 2608 aa7.58□□□□□ -1.2
VPS18-201ENST00000220509 TRBV10-1A0A0K0K1A3 114 aa7.58□□□□□ -1.2
VPS18-201ENST00000220509 AMELXQ99217 191 aa7.58□□□□□ -1.2
VPS18-201ENST00000220509 HIVEP1P15822 2718 aa7.58□□□□□ -1.2
VPS18-201ENST00000220509 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
VPS18-201ENST00000220509 NBEAL1Q6ZS30 2694 aa7.57□□□□□ -1.2
VPS18-201ENST00000220509 H7BZZ5 65 aa7.57□□□□□ -1.2
VPS18-201ENST00000220509 LINC00315P59091 139 aa7.57□□□□□ -1.2
VPS18-201ENST00000220509 A0A096LNT2 108 aa7.57□□□□□ -1.2
VPS18-201ENST00000220509 LOC100131303A0A0U1RQF7 123 aa7.57□□□□□ -1.2
VPS18-201ENST00000220509 LYPD5Q6UWN5 251 aa7.57□□□□□ -1.2
VPS18-201ENST00000220509 LRCOL1A6NCL2 159 aa7.56□□□□□ -1.2
VPS18-201ENST00000220509 WFDC9Q8NEX5 89 aa7.56□□□□□ -1.2
VPS18-201ENST00000220509 PSPHP1O15172 72 aa7.56□□□□□ -1.2
VPS18-201ENST00000220509 FAM222AQ5U5X8 452 aa7.56□□□□□ -1.2
VPS18-201ENST00000220509 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
VPS18-201ENST00000220509 SLPIP03973 132 aa7.56□□□□□ -1.2
VPS18-201ENST00000220509 CR1P17927 2039 aa7.55□□□□□ -1.2
VPS18-201ENST00000220509 SPART-AS1P0CW21 52 aa7.55□□□□□ -1.2
VPS18-201ENST00000220509 ZNF469Q96JG9 3925 aaPredicted RBP7.55□□□□□ -1.2
VPS18-201ENST00000220509 FUSP35637 526 aaKnown RBP eCLIP7.55□□□□□ -1.2
VPS18-201ENST00000220509 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
VPS18-201ENST00000220509 Q8N2B8 174 aa7.54□□□□□ -1.2
VPS18-201ENST00000220509 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
VPS18-201ENST00000220509 BEAN1Q3B7T3 259 aa7.54□□□□□ -1.2
VPS18-201ENST00000220509 PRO0255Q9UI72 69 aa7.54□□□□□ -1.2
VPS18-201ENST00000220509 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
VPS18-201ENST00000220509 COX7A2LO14548 114 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms