RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 COPS9Q8WXC6 57 aa11.71□□□□□ -0.53
RABGGTA-201ENST00000216840 FOXI1Q12951 378 aa11.71□□□□□ -0.54
RABGGTA-201ENST00000216840 WFDC10BQ8IUB3 73 aa11.71□□□□□ -0.54
RABGGTA-201ENST00000216840 MGAM2Q2M2H8 2515 aa11.7□□□□□ -0.54
RABGGTA-201ENST00000216840 ESRGQ1W209 222 aa11.7□□□□□ -0.54
RABGGTA-201ENST00000216840 ENHOQ6UWT2 76 aa11.7□□□□□ -0.54
RABGGTA-201ENST00000216840 LYRM7Q5U5X0 104 aa11.69□□□□□ -0.54
RABGGTA-201ENST00000216840 PPDPFQ9H3Y8 114 aa11.69□□□□□ -0.54
RABGGTA-201ENST00000216840 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
RABGGTA-201ENST00000216840 MIR7-3HGQ8N6C7 128 aa11.68□□□□□ -0.54
RABGGTA-201ENST00000216840 HUWE1Q7Z6Z7 4374 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-201ENST00000216840 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
RABGGTA-201ENST00000216840 PSMB2P49721 201 aa11.67□□□□□ -0.54
RABGGTA-201ENST00000216840 KIAA0087Q14695 138 aa11.67□□□□□ -0.54
RABGGTA-201ENST00000216840 Q1RN00 199 aa11.67□□□□□ -0.54
RABGGTA-201ENST00000216840 MALP21145 153 aa11.67□□□□□ -0.54
RABGGTA-201ENST00000216840 LINC00158P58513 81 aa11.67□□□□□ -0.54
RABGGTA-201ENST00000216840 TCL1BO95988 128 aa11.66□□□□□ -0.54
RABGGTA-201ENST00000216840 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
RABGGTA-201ENST00000216840 C2orf82Q6UX34 121 aa11.66□□□□□ -0.54
RABGGTA-201ENST00000216840 TRAV10A0A0B4J240 114 aa11.66□□□□□ -0.54
RABGGTA-201ENST00000216840 F8W1H4 67 aa11.65□□□□□ -0.54
RABGGTA-201ENST00000216840 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-201ENST00000216840 PRO0461Q9UI25 63 aa11.65□□□□□ -0.54
RABGGTA-201ENST00000216840 TRBV20-1A0A075B6N2 111 aa11.64□□□□□ -0.55
RABGGTA-201ENST00000216840 TRBV30A0A0K0K1B3 111 aa11.64□□□□□ -0.55
RABGGTA-201ENST00000216840 CRPP02741 224 aa11.64□□□□□ -0.55
RABGGTA-201ENST00000216840 PFN2P35080 140 aa11.64□□□□□ -0.55
RABGGTA-201ENST00000216840 UBE2WQ96B02 151 aa11.64□□□□□ -0.55
RABGGTA-201ENST00000216840 CKS1BP61024 79 aa11.64□□□□□ -0.55
RABGGTA-201ENST00000216840 TRIAP1O43715 76 aa11.63□□□□□ -0.55
RABGGTA-201ENST00000216840 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
RABGGTA-201ENST00000216840 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-201ENST00000216840 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
RABGGTA-201ENST00000216840 CXCL5P42830 114 aa11.63□□□□□ -0.55
RABGGTA-201ENST00000216840 WFDC2Q14508 124 aa11.63□□□□□ -0.55
RABGGTA-201ENST00000216840 MTURNQ8N3F0 131 aa11.63□□□□□ -0.55
RABGGTA-201ENST00000216840 OCIAD2Q56VL3 154 aa11.61□□□□□ -0.55
RABGGTA-201ENST00000216840 CCL18P55774 89 aa11.61□□□□□ -0.55
RABGGTA-201ENST00000216840 C15orf53Q8NAA6 179 aa11.6□□□□□ -0.55
RABGGTA-201ENST00000216840 CBY1Q9Y3M2 126 aa11.6□□□□□ -0.55
RABGGTA-201ENST00000216840 LINC01556Q5JQF7 62 aa11.59□□□□□ -0.55
RABGGTA-201ENST00000216840 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
RABGGTA-201ENST00000216840 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
RABGGTA-201ENST00000216840 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
RABGGTA-201ENST00000216840 KRTAP21-3Q3LHN1 58 aa11.58□□□□□ -0.56
RABGGTA-201ENST00000216840 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.56
RABGGTA-201ENST00000216840 IGKV2-28A0A075B6P5 120 aa11.57□□□□□ -0.56
RABGGTA-201ENST00000216840 IGKV2D-28P01615 120 aa11.57□□□□□ -0.56
RABGGTA-201ENST00000216840 C6orf223Q8N319 242 aa11.57□□□□□ -0.56
RABGGTA-201ENST00000216840 COX17Q14061 63 aa11.56□□□□□ -0.56
RABGGTA-201ENST00000216840 COX6CP09669 75 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 ATXN8Q156A1 80 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 C10orf25Q5T742 122 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 LINC00337Q8N6G1 96 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 LINC00588Q9Y4M8 146 aa11.55□□□□□ -0.56
RABGGTA-201ENST00000216840 ETDBQ3ZM63 59 aa11.53□□□□□ -0.56
RABGGTA-201ENST00000216840 DNAH9Q9NYC9 4486 aa11.53□□□□□ -0.56
RABGGTA-201ENST00000216840 K7ERU9 68 aa11.53□□□□□ -0.56
RABGGTA-201ENST00000216840 CLEC2BQ92478 149 aa11.52□□□□□ -0.57
RABGGTA-201ENST00000216840 NTN5Q8WTR8 489 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-201ENST00000216840 B9D2Q9BPU9 175 aa11.51□□□□□ -0.57
RABGGTA-201ENST00000216840 LINC01620Q4KN68 170 aa11.51□□□□□ -0.57
RABGGTA-201ENST00000216840 C9JAW5 83 aa11.5□□□□□ -0.57
RABGGTA-201ENST00000216840 C1orf43Q9BWL3 253 aa11.5□□□□□ -0.57
RABGGTA-201ENST00000216840 LST1O00453 97 aa11.49□□□□□ -0.57
RABGGTA-201ENST00000216840 GVQW2A0A096LPI5 108 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-201ENST00000216840 SLC25A20O43772 301 aa11.48□□□□□ -0.57
RABGGTA-201ENST00000216840 IGKV2D-24A0A075B6R9 120 aa11.48□□□□□ -0.57
RABGGTA-201ENST00000216840 RPL28P46779 137 aaKnown RBP11.48□□□□□ -0.57
RABGGTA-201ENST00000216840 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
RABGGTA-201ENST00000216840 COL7A1Q02388 2944 aa11.48□□□□□ -0.57
RABGGTA-201ENST00000216840 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
RABGGTA-201ENST00000216840 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
RABGGTA-201ENST00000216840 ZNF561-AS1K7EIQ3 104 aa11.47□□□□□ -0.57
RABGGTA-201ENST00000216840 RNF151Q2KHN1 245 aa11.47□□□□□ -0.57
RABGGTA-201ENST00000216840 MUC7Q8TAX7 377 aa11.47□□□□□ -0.57
RABGGTA-201ENST00000216840 M0QXV9 152 aa11.46□□□□□ -0.57
RABGGTA-201ENST00000216840 NDUFC2O95298 119 aa11.45□□□□□ -0.58
RABGGTA-201ENST00000216840 PCP4P48539 62 aa11.45□□□□□ -0.58
RABGGTA-201ENST00000216840 SMIM11BQ8TCY0 68 aa11.45□□□□□ -0.58
RABGGTA-201ENST00000216840 Q9HAA7 133 aa11.45□□□□□ -0.58
RABGGTA-201ENST00000216840 STAB2Q8WWQ8 2551 aa11.45□□□□□ -0.58
RABGGTA-201ENST00000216840 TRBV10-2A0A0K0K1G8 114 aa11.45□□□□□ -0.58
RABGGTA-201ENST00000216840 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
RABGGTA-201ENST00000216840 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-201ENST00000216840 TEN1Q86WV5 123 aa11.44□□□□□ -0.58
RABGGTA-201ENST00000216840 ANKRD29Q8N6D5 301 aa11.44□□□□□ -0.58
RABGGTA-201ENST00000216840 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
RABGGTA-201ENST00000216840 LINC01600Q96MT4 127 aa11.44□□□□□ -0.58
RABGGTA-201ENST00000216840 CAMK2N2Q96S95 79 aa11.44□□□□□ -0.58
RABGGTA-201ENST00000216840 Q8NDZ9 215 aa11.43□□□□□ -0.58
RABGGTA-201ENST00000216840 C2orf48Q96LS8 159 aa11.42□□□□□ -0.58
RABGGTA-201ENST00000216840 Q6ZRU5 148 aa11.4□□□□□ -0.58
RABGGTA-201ENST00000216840 FAM218AQ96MZ4 157 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms