RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 ABCA4P78363 2273 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 TOP2BQ02880 1626 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 PHRF1Q9P1Y6 1649 aaKnown RBP0.2□□□□□ -2.38
CDKN3-201ENST00000216414 PSME4Q14997 1843 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 ARFGEF1Q9Y6D6 1849 aa0.2□□□□□ -2.38
CDKN3-201ENST00000216414 BICRAQ9NZM4 1560 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 DIP2CQ9Y2E4 1556 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 APCP25054 2843 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 CUX1P39880 1505 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 URB2Q14146 1524 aaKnown RBP0.19□□□□□ -2.38
CDKN3-201ENST00000216414 AKAP11Q9UKA4 1901 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 MYO7BQ6PIF6 2116 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 JMJD1CQ15652 2540 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 TTC28Q96AY4 2481 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 ABCA1O95477 2261 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 QRICH2Q9H0J4 1663 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 FANCAO15360 1455 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 PTPRMP28827 1452 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 NKTRP30414 1462 aaKnown RBP0.19□□□□□ -2.38
CDKN3-201ENST00000216414 C1orf167Q5SNV9 1468 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 PLEKHH2Q8IVE3 1493 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 A0A087WVE0 104 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 LINC00587B1AMM8 73 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 IFI6P09912 130 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 SMIM13P0DJ93 91 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 COX7BP24311 80 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 H1FX-AS1Q4G0G2 97 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 BVES-AS1Q5T3Y7 98 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 C14orf144Q96I85 54 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 SPRR4Q96PI1 79 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 MRPL34Q9BQ48 92 aaKnown RBP0.19□□□□□ -2.38
CDKN3-201ENST00000216414 PRO3102Q9H379 93 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 ST20Q9HBF5 79 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 FAM208BQ5VWN6 2430 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 BTAF1O14981 1849 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 MAP2P11137 1827 aaKnown RBP0.19□□□□□ -2.38
CDKN3-201ENST00000216414 BIVM-ERCC5R4GMW8 1640 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 ABCA12Q86UK0 2595 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 HFM1A2PYH4 1435 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 SPTBN2O15020 2390 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 PIEZO1Q92508 2521 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 RGPD8O14715 1765 aaPredicted RBP0.19□□□□□ -2.38
CDKN3-201ENST00000216414 RGPD5Q99666 1765 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 THOC2Q8NI27 1593 aaKnown RBP0.19□□□□□ -2.38
CDKN3-201ENST00000216414 IGF2RP11717 2491 aa0.19□□□□□ -2.38
CDKN3-201ENST00000216414 CHD1O14646 1710 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 IGSF10Q6WRI0 2623 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 ABCC3O15438 1527 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 ZMYM4Q5VZL5 1548 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 MYOM1P52179 1685 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 CUL7Q14999 1698 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 CTTNBP2Q8WZ74 1663 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 TPRP12270 2363 aaKnown RBP0.18□□□□□ -2.38
CDKN3-201ENST00000216414 ZFYVE26Q68DK2 2539 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 CCDC88BA6NC98 1476 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 MBD5Q9P267 1494 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 PLCE1Q9P212 2302 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 WDR97A6NE52 1622 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 LRP6O75581 1613 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 TRAV21A0A0B4J279 112 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 G3V318 75 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 H3BUA1 57 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 H3BVH4 76 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 M0R2T5 61 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 IGLC2P0DOY2 106 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 IGLC3P0DOY3 106 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 SPRR1BP22528 89 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 DEFB135Q30KP9 77 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 NCBP2-AS2Q69YL0 99 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 SMIM5Q71RC9 77 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 C9orf62Q8N4C0 152 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 DEFB123Q8N688 67 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 SMR3AQ99954 134 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 NOP10Q9NPE3 64 aaKnown RBP0.18□□□□□ -2.38
CDKN3-201ENST00000216414 UNC79Q9P2D8 2635 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 TROQ12816 1431 aaPredicted RBP0.18□□□□□ -2.38
CDKN3-201ENST00000216414 ANKRD50Q9ULJ7 1429 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 MYH4Q9Y623 1939 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 PEG3Q9GZU2 1588 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 PKD1L3Q7Z443 1732 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 XRN1Q8IZH2 1706 aaKnown RBP0.18□□□□□ -2.38
CDKN3-201ENST00000216414 ABCA3Q99758 1704 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 ABCC1P33527 1531 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 C5P01031 1676 aa0.18□□□□□ -2.38
CDKN3-201ENST00000216414 TSC2P49815 1807 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 RALGAPBQ86X10 1494 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 PAPPAQ13219 1627 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 TNCP24821 2201 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 F8P00451 2351 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 C9orf92A6NGG3 77 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 K7EMI3 77 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 K7EP34 96 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 PDCD5O14737 125 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 MAST4O15021 2626 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 MT-ATP8P03928 68 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 LINC00158P58513 81 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 AKAP6Q13023 2319 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 ATXN8Q156A1 80 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 SPHKAPQ2M3C7 1700 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms