RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 LINC01620Q4KN68 170 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 NOTCH1P46531 2555 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 EGFEM1PQ0D2K5 195 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 TEN1Q86WV5 123 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 ANKRD29Q8N6D5 301 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 BAHCC1Q9P281 2608 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 SHISA2Q6UWI4 295 aa5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 CHCHD10Q8WYQ3 142 aaPredicted RBP5.47□□□□□ -1.53
HMGXB4-201ENST00000216106 PCP4P48539 62 aa5.46□□□□□ -1.53
HMGXB4-201ENST00000216106 C2orf82Q6UX34 121 aa5.46□□□□□ -1.53
HMGXB4-201ENST00000216106 LELP1Q5T871 98 aa5.46□□□□□ -1.54
HMGXB4-201ENST00000216106 CYSRT1A8MQ03 144 aa5.46□□□□□ -1.54
HMGXB4-201ENST00000216106 IBA57-AS1B1ANH7 110 aa5.46□□□□□ -1.54
HMGXB4-201ENST00000216106 C21orf62-AS1Q17RA5 79 aa5.46□□□□□ -1.54
HMGXB4-201ENST00000216106 CD164L2Q6UWJ8 174 aa5.46□□□□□ -1.54
HMGXB4-201ENST00000216106 Q8IZM0 81 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 SND1-IT1Q9HBX3 110 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 DNAH3Q8TD57 4116 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 COX7A2LO14548 114 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 Q6ZTC4 211 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 CARD19Q96LW7 228 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 IGKV2-28A0A075B6P5 120 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 LST1O00453 97 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 IGKV2D-28P01615 120 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 MALP21145 153 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 CCL18P55774 89 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 PPDPFLQ8WWR9 84 aa5.45□□□□□ -1.54
HMGXB4-201ENST00000216106 LINC00337Q8N6G1 96 aa5.44□□□□□ -1.54
HMGXB4-201ENST00000216106 KLK12Q9UKR0 248 aa5.44□□□□□ -1.54
HMGXB4-201ENST00000216106 TRBV10-2A0A0K0K1G8 114 aa5.44□□□□□ -1.54
HMGXB4-201ENST00000216106 CRPP02741 224 aa5.44□□□□□ -1.54
HMGXB4-201ENST00000216106 CKS1BP61024 79 aa5.44□□□□□ -1.54
HMGXB4-201ENST00000216106 LYPD5Q6UWN5 251 aa5.44□□□□□ -1.54
HMGXB4-201ENST00000216106 PPDPFQ9H3Y8 114 aa5.44□□□□□ -1.54
HMGXB4-201ENST00000216106 GAGE12HA6NDE8 117 aa5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 KPRPQ5T749 579 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 NBEAL1Q6ZS30 2694 aa5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 A0A0J9YWU9 116 aa5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 CFAP161Q6P656 301 aa5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 LINC01561Q8N1V8 128 aa5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 TRAV13-2A0A0B4J235 113 aa5.43□□□□□ -1.54
HMGXB4-201ENST00000216106 M0QXV9 152 aa5.42□□□□□ -1.54
HMGXB4-201ENST00000216106 PRB2P02812 416 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-201ENST00000216106 TEX49A0A1B0GTD5 131 aa5.42□□□□□ -1.54
HMGXB4-201ENST00000216106 NANOS2P60321 138 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-201ENST00000216106 C9orf116Q5BN46 136 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-201ENST00000216106 WFDC10BQ8IUB3 73 aa5.42□□□□□ -1.54
HMGXB4-201ENST00000216106 PRR34Q9NV39 138 aa5.42□□□□□ -1.54
HMGXB4-201ENST00000216106 ENHOQ6UWT2 76 aa5.41□□□□□ -1.54
HMGXB4-201ENST00000216106 LINC00526Q96FQ7 95 aa5.41□□□□□ -1.54
HMGXB4-201ENST00000216106 SPATA25Q9BR10 227 aa5.41□□□□□ -1.54
HMGXB4-201ENST00000216106 C6orf223Q8N319 242 aa5.41□□□□□ -1.54
HMGXB4-201ENST00000216106 UBE2WQ96B02 151 aa5.41□□□□□ -1.54
HMGXB4-201ENST00000216106 FAM218AQ96MZ4 157 aa5.4□□□□□ -1.54
HMGXB4-201ENST00000216106 H3BT86 120 aa5.4□□□□□ -1.54
HMGXB4-201ENST00000216106 CXCL5P42830 114 aa5.4□□□□□ -1.54
HMGXB4-201ENST00000216106 H3BNG1 76 aa5.4□□□□□ -1.55
HMGXB4-201ENST00000216106 SPAG11BQ08648 103 aa5.4□□□□□ -1.55
HMGXB4-201ENST00000216106 OR13C6PQ8NH95 151 aa5.4□□□□□ -1.55
HMGXB4-201ENST00000216106 SMIM11BQ8TCY0 68 aa5.4□□□□□ -1.55
HMGXB4-201ENST00000216106 RPL28P46779 137 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 C11orf45Q8TAV5 145 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 DEFB131BA0A096LNP1 70 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 C10orf25Q5T742 122 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 LINC01600Q96MT4 127 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 CDIP1Q9H305 208 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 TRAV8-4A0A0B4J246 113 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 PRR3P79522 188 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 ESRGQ1W209 222 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
HMGXB4-201ENST00000216106 COX17Q14061 63 aa5.38□□□□□ -1.55
HMGXB4-201ENST00000216106 KLK5Q9Y337 293 aaPredicted RBP5.38□□□□□ -1.55
HMGXB4-201ENST00000216106 MRAPQ8TCY5 172 aa5.37□□□□□ -1.55
HMGXB4-201ENST00000216106 Q9HAA7 133 aa5.37□□□□□ -1.55
HMGXB4-201ENST00000216106 TRACP01848 142 aa5.37□□□□□ -1.55
HMGXB4-201ENST00000216106 A0A087WYN8 130 aa5.36□□□□□ -1.55
HMGXB4-201ENST00000216106 MGAM2Q2M2H8 2515 aa5.36□□□□□ -1.55
HMGXB4-201ENST00000216106 Q8NDZ9 215 aa5.36□□□□□ -1.55
HMGXB4-201ENST00000216106 XGP55808 180 aa5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 DEFB121Q5J5C9 76 aa5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 NCR3O14931 201 aa5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 HIGD2BQ4VC39 106 aa5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 K7EIL1 84 aa5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 MT-ATP8P03928 68 aa5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 BAALC-AS2P0C853 105 aa5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
HMGXB4-201ENST00000216106 NDUFC2O95298 119 aa5.34□□□□□ -1.55
HMGXB4-201ENST00000216106 DNAL4O96015 105 aa5.34□□□□□ -1.55
HMGXB4-201ENST00000216106 C6orf48Q9UBA6 75 aa5.34□□□□□ -1.55
HMGXB4-201ENST00000216106 KRTAP26-1Q6PEX3 210 aa5.34□□□□□ -1.55
HMGXB4-201ENST00000216106 H0YGX0 51 aa5.33□□□□□ -1.56
HMGXB4-201ENST00000216106 LECT2O14960 151 aa5.33□□□□□ -1.56
HMGXB4-201ENST00000216106 TM2D3Q9BRN9 247 aa5.33□□□□□ -1.56
HMGXB4-201ENST00000216106 ZNF561-AS1K7EIQ3 104 aa5.33□□□□□ -1.56
HMGXB4-201ENST00000216106 C22orf24Q9Y442 160 aa5.33□□□□□ -1.56
HMGXB4-201ENST00000216106 LINC01556Q5JQF7 62 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms