RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 CFC1P0CG37 223 aa10.52□□□□□ -0.73
LAPTM4A-201ENST00000175091 MALP21145 153 aa10.52□□□□□ -0.73
LAPTM4A-201ENST00000175091 KIAA0087Q14695 138 aa10.52□□□□□ -0.73
LAPTM4A-201ENST00000175091 DNAH1Q9P2D7 4330 aa10.52□□□□□ -0.73
LAPTM4A-201ENST00000175091 CSMD3Q7Z407 3707 aa10.51□□□□□ -0.73
LAPTM4A-201ENST00000175091 A0A0B4J2C4 111 aa10.5□□□□□ -0.73
LAPTM4A-201ENST00000175091 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
LAPTM4A-201ENST00000175091 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
LAPTM4A-201ENST00000175091 NPC2P61916 151 aa10.5□□□□□ -0.73
LAPTM4A-201ENST00000175091 VAMP3Q15836 100 aa10.5□□□□□ -0.73
LAPTM4A-201ENST00000175091 C6orf226Q5I0X4 101 aa10.5□□□□□ -0.73
LAPTM4A-201ENST00000175091 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 A0A0U1RRA0 63 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 CCL18P55774 89 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 LINC00308Q8TCZ7 52 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 LYSTQ99698 3801 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 IBA57-AS1B1ANH7 110 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 CXCL5P42830 114 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 KRTAP26-1Q6PEX3 210 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 UPK3BQ9BT76 320 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 PPDPFQ9H3Y8 114 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
LAPTM4A-201ENST00000175091 DNAH7Q8WXX0 4024 aa10.48□□□□□ -0.73
LAPTM4A-201ENST00000175091 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 SOSTDC1Q6X4U4 206 aa10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 KLK5Q9Y337 293 aaPredicted RBP10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 TSPAN13O95857 204 aa10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 CFAP161Q6P656 301 aa10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 COPS9Q8WXC6 57 aa10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 PRO1854Q9UHT4 67 aa10.47□□□□□ -0.73
LAPTM4A-201ENST00000175091 FABP2P12104 132 aa10.46□□□□□ -0.74
LAPTM4A-201ENST00000175091 CKS1BP61024 79 aa10.46□□□□□ -0.74
LAPTM4A-201ENST00000175091 SPAG11BQ08648 103 aa10.46□□□□□ -0.74
LAPTM4A-201ENST00000175091 ERG28Q9UKR5 140 aa10.46□□□□□ -0.74
LAPTM4A-201ENST00000175091 MIR7-3HGQ8N6C7 128 aa10.45□□□□□ -0.74
LAPTM4A-201ENST00000175091 PLECQ15149 4684 aaKnown RBP10.45□□□□□ -0.74
LAPTM4A-201ENST00000175091 K7EP34 96 aa10.44□□□□□ -0.74
LAPTM4A-201ENST00000175091 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
LAPTM4A-201ENST00000175091 LINC00158P58513 81 aa10.43□□□□□ -0.74
LAPTM4A-201ENST00000175091 APLNQ9ULZ1 77 aa10.43□□□□□ -0.74
LAPTM4A-201ENST00000175091 SPCS1Q9Y6A9 102 aa10.43□□□□□ -0.74
LAPTM4A-201ENST00000175091 PFN2P35080 140 aa10.42□□□□□ -0.74
LAPTM4A-201ENST00000175091 GAGE10A6NGK3 116 aa10.42□□□□□ -0.74
LAPTM4A-201ENST00000175091 GTF2H5Q6ZYL4 71 aa10.42□□□□□ -0.74
LAPTM4A-201ENST00000175091 STARD9Q9P2P6 4700 aa10.41□□□□□ -0.74
LAPTM4A-201ENST00000175091 C6orf223Q8N319 242 aa10.41□□□□□ -0.74
LAPTM4A-201ENST00000175091 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
LAPTM4A-201ENST00000175091 NUPR2A6NF83 97 aa10.4□□□□□ -0.74
LAPTM4A-201ENST00000175091 COX17Q14061 63 aa10.4□□□□□ -0.74
LAPTM4A-201ENST00000175091 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
LAPTM4A-201ENST00000175091 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
LAPTM4A-201ENST00000175091 LINC00526Q96FQ7 95 aa10.39□□□□□ -0.75
LAPTM4A-201ENST00000175091 Q9HAA7 133 aa10.39□□□□□ -0.75
LAPTM4A-201ENST00000175091 C10orf25Q5T742 122 aa10.39□□□□□ -0.75
LAPTM4A-201ENST00000175091 GVQW2A0A096LPI5 108 aaPredicted RBP10.37□□□□□ -0.75
LAPTM4A-201ENST00000175091 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
LAPTM4A-201ENST00000175091 FBN3Q75N90 2809 aa10.37□□□□□ -0.75
LAPTM4A-201ENST00000175091 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
LAPTM4A-201ENST00000175091 LYRM7Q5U5X0 104 aa10.37□□□□□ -0.75
LAPTM4A-201ENST00000175091 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
LAPTM4A-201ENST00000175091 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
LAPTM4A-201ENST00000175091 H7C2G1 150 aa10.36□□□□□ -0.75
LAPTM4A-201ENST00000175091 RPL13AP40429 203 aaKnown RBP10.36□□□□□ -0.75
LAPTM4A-201ENST00000175091 Q1RN00 199 aa10.36□□□□□ -0.75
LAPTM4A-201ENST00000175091 HIGD2BQ4VC39 106 aa10.36□□□□□ -0.75
LAPTM4A-201ENST00000175091 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
LAPTM4A-201ENST00000175091 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
LAPTM4A-201ENST00000175091 MUC7Q8TAX7 377 aa10.35□□□□□ -0.75
LAPTM4A-201ENST00000175091 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 TENM2Q9NT68 2774 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 TRBV30A0A0K0K1B3 111 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 RMI2Q96E14 147 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 C2orf48Q96LS8 159 aa10.34□□□□□ -0.75
LAPTM4A-201ENST00000175091 KRTAP1-5Q9BYS1 174 aa10.33□□□□□ -0.76
LAPTM4A-201ENST00000175091 TRIAP1O43715 76 aa10.32□□□□□ -0.76
LAPTM4A-201ENST00000175091 PSMB2P49721 201 aa10.32□□□□□ -0.76
LAPTM4A-201ENST00000175091 CAMK2N2Q96S95 79 aa10.32□□□□□ -0.76
LAPTM4A-201ENST00000175091 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
LAPTM4A-201ENST00000175091 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
LAPTM4A-201ENST00000175091 H3BMG7 143 aa10.31□□□□□ -0.76
LAPTM4A-201ENST00000175091 VPS13DQ5THJ4 4388 aa10.31□□□□□ -0.76
LAPTM4A-201ENST00000175091 TRBV20-1A0A075B6N2 111 aa10.3□□□□□ -0.76
LAPTM4A-201ENST00000175091 TRAV13-2A0A0B4J235 113 aa10.3□□□□□ -0.76
LAPTM4A-201ENST00000175091 F8WDY8 70 aa10.3□□□□□ -0.76
LAPTM4A-201ENST00000175091 TCL1BO95988 128 aa10.3□□□□□ -0.76
LAPTM4A-201ENST00000175091 Q6ZRU5 148 aa10.3□□□□□ -0.76
LAPTM4A-201ENST00000175091 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
LAPTM4A-201ENST00000175091 NDUFC2O95298 119 aa10.29□□□□□ -0.76
LAPTM4A-201ENST00000175091 SCGB1C2P0DMR2 95 aa10.29□□□□□ -0.76
LAPTM4A-201ENST00000175091 USP17L23D6RBM5 183 aa10.27□□□□□ -0.77
LAPTM4A-201ENST00000175091 COX6CP09669 75 aa10.26□□□□□ -0.77
LAPTM4A-201ENST00000175091 PRO0461Q9UI25 63 aa10.26□□□□□ -0.77
LAPTM4A-201ENST00000175091 SYCNQ0VAF6 134 aa10.25□□□□□ -0.77
LAPTM4A-201ENST00000175091 Q8NDZ9 215 aa10.25□□□□□ -0.77
LAPTM4A-201ENST00000175091 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
LAPTM4A-201ENST00000175091 F8W1H4 67 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 649.4 ms