RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 RBMY1DP0C7P1 496 aaKnown RBP3.58□□□□□ -1.84
CDH17-201ENST00000027335 RBMY1A1P0DJD3 496 aaKnown RBP3.58□□□□□ -1.84
CDH17-201ENST00000027335 S100A7L2Q5SY68 101 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 HIVEP1P15822 2718 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 POLR2KP53803 58 aaKnown RBP3.58□□□□□ -1.84
CDH17-201ENST00000027335 TNP2Q05952 138 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 CFAP126Q5VTH2 177 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 NIPBLQ6KC79 2804 aaeCLIP3.58□□□□□ -1.84
CDH17-201ENST00000027335 MXRA5Q9NR99 2828 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 IGHV1-58A0A0C4DH39 117 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 TRBV7-7A0A0K0K1E9 115 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 SOCS3O14543 225 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 TRIAP1O43715 76 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 NDUFS5O43920 106 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 KRTAP1-3Q8IUG1 177 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 TMEM263Q8WUH6 116 aaKnown RBP3.58□□□□□ -1.84
CDH17-201ENST00000027335 C16orf74Q96GX8 76 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 HHLA3Q9XRX5 114 aa3.58□□□□□ -1.84
CDH17-201ENST00000027335 SLC25A20O43772 301 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 CRIP2P52943 208 aaPredicted RBP3.57□□□□□ -1.84
CDH17-201ENST00000027335 ODF3L2Q3SX64 289 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 NFE4Q86UQ8 179 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 NTN5Q8WTR8 489 aaPredicted RBP3.57□□□□□ -1.84
CDH17-201ENST00000027335 CUBNO60494 3623 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 NOTCH1P46531 2555 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 IGHV4-4A0A075B6R2 117 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 TRBV27A0A0K0K1C4 114 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 SLC25A29Q8N8R3 303 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 VSIG2Q96IQ7 327 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 ODF3Q96PU9 254 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 CR1P17927 2039 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 TSHBP01222 138 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 ZNF22P17026 224 aaPredicted RBP3.57□□□□□ -1.84
CDH17-201ENST00000027335 UBE2WQ96B02 151 aa3.57□□□□□ -1.84
CDH17-201ENST00000027335 LORP23490 312 aaPredicted RBP3.56□□□□□ -1.84
CDH17-201ENST00000027335 PIK3CD-AS1Q5SR53 167 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 C9orf66Q5T8R8 295 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 TM2D3Q9BRN9 247 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 A0A0J9YXY3 114 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 IGHV3-30P01768 117 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 IGHV3-33P01772 117 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 IGHV3-30-5P0DP03 117 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 OVOL2Q9BRP0 275 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 ZNF580Q9UK33 172 aa3.56□□□□□ -1.84
CDH17-201ENST00000027335 IGLV2-18A0A075B6J9 118 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 INAFM2P0DMQ5 153 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 NDUFA11Q86Y39 141 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.55□□□□□ -1.84
CDH17-201ENST00000027335 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 Q9HAA7 133 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 NBEAL2Q6ZNJ1 2754 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 MRPS36P82909 103 aaKnown RBP3.55□□□□□ -1.84
CDH17-201ENST00000027335 C16orf95Q9H693 158 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 TRBV6-5A0A0K0K1A5 114 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 Q6ZSN1 163 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 NBEAL1Q6ZS30 2694 aa3.55□□□□□ -1.84
CDH17-201ENST00000027335 RBMY1FQ15415 496 aaKnown RBP3.54□□□□□ -1.84
CDH17-201ENST00000027335 FAM19A3Q7Z5A8 133 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 MIR7-3HGQ8N6C7 128 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 SND1-IT1Q9HBX3 110 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 TRBV10-1A0A0K0K1A3 114 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 TMEM223A0PJW6 202 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 SPART-AS1P0CW21 52 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 ZNF73O43830 326 aaPredicted RBP3.54□□□□□ -1.84
CDH17-201ENST00000027335 TIMM17BO60830 172 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 FSHBP01225 129 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 COX7B2Q8TF08 81 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 PRO0255Q9UI72 69 aa3.54□□□□□ -1.84
CDH17-201ENST00000027335 EPM2AB3EWF7 344 aa3.53□□□□□ -1.84
CDH17-201ENST00000027335 TMEM256-PLSCR3K7ERE1 68 aa3.53□□□□□ -1.84
CDH17-201ENST00000027335 TSPEAR-AS2P59090 65 aa3.53□□□□□ -1.84
CDH17-201ENST00000027335 ICOSQ9Y6W8 199 aa3.53□□□□□ -1.84
CDH17-201ENST00000027335 IGKV2D-24A0A075B6R9 120 aa3.53□□□□□ -1.84
CDH17-201ENST00000027335 Q6ZVQ6 151 aa3.53□□□□□ -1.84
CDH17-201ENST00000027335 LINC00269Q8N2A0 174 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 NSD1Q96L73 2696 aaPredicted RBP3.52□□□□□ -1.85
CDH17-201ENST00000027335 IGLV4-69A0A075B6H9 119 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 PRB2P02812 416 aaPredicted RBP3.52□□□□□ -1.85
CDH17-201ENST00000027335 MP68P56378 58 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 KRTAP1-1Q07627 177 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 SERP2Q8N6R1 65 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 UBE2D4Q9Y2X8 147 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 M0R378 163 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 COX7A2LO14548 114 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 LINC00315P59091 139 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 SBSPONQ8IVN8 264 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 UBE2DNLQ8IWF7 75 aa3.52□□□□□ -1.85
CDH17-201ENST00000027335 A0A087WZ39 114 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 TRAV13-2A0A0B4J235 113 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 A8MUN3 132 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 BAALC-AS2P0C853 105 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 HIST1H4AP62805 103 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms