RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Cd3eP22646 189 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Sumo1P63166 101 aaKnown RBP11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 KhkP97328 298 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Znf664Q4VA44 261 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Trav15-1-dv6-1Q5R1D2 117 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Pafah1b2Q61206 229 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Pygo2Q80V76 405 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Slc36a4Q8CH36 500 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Olfr491Q8VG06 310 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Olfr211Q8VGH2 309 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Olfr33Q8VGX7 318 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Ppp1r14aQ91VC7 147 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Gatad1Q920S3 266 aa11.35□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Ighv1-20A0A0A6YX66 117 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Gm6904E9PVF1 202 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Zfp867E9Q2M4 473 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Loxl2P58022 776 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 BC100530Q497J0 97 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Fa2hQ5MPP0 372 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Wipf2Q6PEV3 440 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Higd1cQ76I25 96 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Sh3bgrl2Q8BG73 107 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 B430305J03RikQ8BQQ8 176 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Oraov1Q8CH62 137 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 TdhQ8K3F7 373 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Rab4bQ91ZR1 213 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Rbm7Q9CQT2 265 aaKnown RBP11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Ndufb3Q9CQZ6 104 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Psmg3Q9CZH3 122 aa11.34□□□□□ -0.59
Ssr1-204ENSMUST00000225319 Utp20Q5XG71 2788 aaKnown RBP11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Ighv5-6A0A075B5Q0 117 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Ighv6-3A0A075B5T2 118 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Trav7-4A0A075B6C1 113 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Zfp950A0A0U1RQ46 609 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Gm14325A2AW67 498 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Gm17455G3UW87 128 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Gm21900J3QP38 180 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Brs3O54798 399 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Ccl1P10146 92 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Trav7d-4Q5R1H9 113 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Vmn1r195Q5SVD6 316 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Tas2r114Q7M722 309 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 9230109A22RikQ8BHE6 111 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 IqcjQ8BPW0 110 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 GaptQ8CB93 157 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Olfr1454Q8VFW2 307 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Ms4a6bQ99N09 244 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 MmdQ9CQY7 238 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Pf4Q9Z126 105 aa11.33□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Usp9xP70398 2559 aaKnown RBP11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Scgb1b15A0A087WP50 93 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Zfp109A0A0U1RPC5 652 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Tmem29A2ANF5 204 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Vmn1r232A2RTT5 351 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Gm17660B9UIU9 90 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Vmn1r149E9PWL6 307 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Vmn1r101E9Q365 307 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Thap8E9Q695 213 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Vmn1r158G3UY92 307 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Scgb2a2J3KMP9 96 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 RanP62827 216 aaKnown RBP11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Cd200r3Q5UKY4 296 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Klhdc1Q80YG3 406 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Bpifb3Q80ZU7 473 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Rbfox2Q8BP71 449 aaKnown RBP11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Msrb3Q8BU85 253 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Etfrf1Q91V16 86 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Rab9aQ9R0M6 201 aa11.32□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Igkv1-131A0A140T8M8 120 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Rnase9P60154 184 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Nbl1Q61477 178 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Il31Q6EAL8 163 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Arl11Q6P3A9 176 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Olfr481Q8VGI5 312 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 FlncQ8VHX6 2726 aaKnown RBP11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Trav12d-3A0A075B6A4 115 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Igkv4-57A0A0A6YYE7 117 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Trav13n-4A0A0G2JG01 110 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Gm5819E9PZ96 154 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Olfr748E9Q9Z0 307 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Nanos1Q80WY3 267 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Olfr983Q8VG90 315 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 SmagpQ99KC7 97 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Spink12Q9D256 87 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Med12A2AGH6 2190 aa11.31□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Unc79Q0KK59 2596 aa11.3□□□□□ -0.6
Ssr1-204ENSMUST00000225319 P01787 123 aa11.3□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Khdc1bP0C7A0 126 aa11.3□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Samd5Q3V1H9 173 aa11.3□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Zfand3Q497H0 227 aa11.3□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Duxbl2Q7TNE6 350 aa11.3□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Nit1Q8VDK1 323 aa11.3□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Arid1bE9Q4N7 2244 aa11.29□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Vma21-psA0A140T8R2 101 aa11.29□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Gm4791J3QQ14 102 aa11.29□□□□□ -0.6
Ssr1-204ENSMUST00000225319 P03980 138 aa11.29□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Phxr2P15972 65 aa11.29□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Twist1P26687 206 aa11.29□□□□□ -0.6
Ssr1-204ENSMUST00000225319 SrstQ06666 185 aa11.29□□□□□ -0.6
Ssr1-204ENSMUST00000225319 Defb30Q30KN4 75 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms