RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Kiss1Q6Y4S4 130 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Rnf17Q99MV7 1640 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 2010106E10RikA2ANY3 279 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Ntf4Q80VU4 209 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Klf16P58334 251 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Zc2hc1aQ8BJH1 324 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Gm9938Q8C3P5 112 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Slc25a1Q8JZU2 311 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Mrpl35Q9CQL6 188 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Gpx2Q9JHC0 190 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Topbp1Q6ZQF0 1515 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 SktA2AQ25 1946 aaKnown RBP7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Ighv14-4A0A0A6YVR1 117 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 3110021N24RikJ3QMN2 152 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 P01671 111 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Psmb8P28063 276 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Tcl1b1P56840 116 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Dph3Q8K0W9 82 aa7.11□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Atp5j2P56135 88 aaKnown RBP7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Vwc2lQ505H4 222 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Stpg1Q9D2F5 341 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Ccl24Q9JKC0 119 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 AicdaQ9WVE0 198 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 P01679 107 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 GgnQ80WJ1 673 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Igkv1-131A0A140T8M8 120 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Igkv3-9A0A140T8P4 119 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Gm20458E9PXJ7 78 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 HrkP62816 92 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Morn4Q6PGF2 146 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 PpdpfQ9CR37 115 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Phlda3Q9WV95 125 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Gm11444F6QMA6 170 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Lmo3Q8BZL8 145 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 S100a3P62818 101 aa7.1□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Gm14295A2BG91 834 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Shisa8J3QNX5 399 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Fam168aQ8BGZ2 244 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Rhno1Q8K3A4 235 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Lamtor5Q9D1L9 91 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 P04213 122 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Negr1Q80Z24 348 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Il1f10Q8R459 152 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Trav6-7-dv9A0A075B639 125 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Spint4Q9D263 159 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Q9D8L0 127 aa7.09□□□□□ -1.27
Clcn3-202ENSMUST00000056508 Gm44973A0A140LJJ1 189 aa7.09□□□□□ -1.28
Clcn3-202ENSMUST00000056508 P01676 107 aa7.09□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Lsm10Q8QZX5 122 aa7.09□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Znrf1Q91V17 227 aa7.09□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Tspoap1Q7TNF8 1846 aa7.09□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Cbll1Q9JIY2 491 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Gm36210A0A1B0GS00 229 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Gm5294J3QP53 216 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Gm10645Q3UPY1 145 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ndufa11Q9D8B4 141 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Srrm4Q8BKA3 608 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Vmn1r72Q8K3N7 306 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Svs5P30933 122 aa7.08□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ighv14-1A0A075B5R4 117 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 P06329 120 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Chtf8P0CG14 533 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 P18532 116 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Tmem91Q8C581 172 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 4930415O20RikQ8CDT5 131 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 VsirQ9D659 308 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Pfn4Q9D6I3 129 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Vsig4F6TUL9 280 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 NppcQ61839 126 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Mrps18bQ99N84 254 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Hecw1Q8K4P8 1604 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Trbv2A0A0B4J1G8 114 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ctxnd1A0A1B0GST9 59 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Iglc3P01845 104 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Lrcol1Q3URS3 161 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ffar1Q76JU9 300 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Znf146Q8BQN6 292 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ercc6l2Q9JIM3 1537 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ighv1-11A0A0A6YWI9 117 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Reg3gO09049 174 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Klrd1O54707 179 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 P01746 140 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Cox6a1P43024 111 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 HbegfQ06186 208 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Bsph1Q3UW26 133 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ighv3-4A0A0A6YXF1 117 aa7.07□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Trbv16A0A0B4J1H3 115 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 C2cd4dP0CG09 341 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Gm10803Q3TZS6 135 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Lhfpl1Q80SV1 220 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Fxyd4Q9D2W0 88 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 1500009C09RikD3YYW9 81 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 1700010B08RikQ9DAI7 102 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Fiz1Q9WTJ4 500 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 P01677 107 aa7.06□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Gm7102J3QQ10 178 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Cdc42bpbQ7TT50 1713 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 1810010D01RikA0A1L1SR87 51 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Rnase13Q5GAM7 153 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Sdf2Q9DCT5 211 aa7.05□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms