RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Tpsab1Q02844 273 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Samd5Q3V1H9 173 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Q8VC23 124 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ube2cQ9D1C1 179 aa7.58□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ighv5-9A0A075B5Q2 117 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ighv1-26A0A075B5V0 117 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Trav13n-4A0A0G2JG01 110 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Rnf217D3YYI7 515 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Thap8E9Q695 213 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 P01812 117 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Iglc2P01844 104 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Myod1P10085 318 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tex26Q0VB26 296 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 RhohQ9D3G9 191 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Dpm2Q9Z324 84 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm10439A2AJU2 433 aaKnown RBP7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm15114B1B0X6 433 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Egr1P08046 533 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 P18526 117 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Cox7a2lQ61387 111 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ssbp1Q9CYR0 152 aaKnown RBP7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 4930583I09RikQ9D2E3 102 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 4930442H23RikQ9D5G7 103 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Q9D727 114 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ltbp1Q8CG19 1712 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 P01655 112 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tdgf1P51865 171 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Shisal1Q0VBP7 198 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Zfp72Q0VFY0 435 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Shisa3Q3UPR0 238 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ms4a12A0A087WSB9 263 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gata2O09100 480 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 AtraidQ6PGD0 223 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 TirapQ99JY1 241 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 PmvkQ9D1G2 192 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Rita1Q9D1H0 253 aa7.57□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ighv1-16A0A075B5U1 98 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tmem8bB1AWJ5 472 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Olfr748E9Q9Z0 307 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm16686Q3UMN9 131 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Rnf126Q91YL2 313 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tex48Q9DA81 110 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Cacna1gQ5SUF7 2381 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Plxnb2B2RXS4 1842 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Trav14n-3A0A075B645 120 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Pglyrp4Q0VB07 374 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Vdac2Q60930 295 aaKnown RBP7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 March3Q8BRX9 218 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ube2v1Q9CZY3 147 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ubr3Q5U430 1889 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Trav6-4A0A075B6B4 115 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Igkv13-84A0A140T8N3 115 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm13030A2APQ6 143 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm11444F6QMA6 170 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Folr2Q05685 251 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Sptbn1Q62261 2363 aaKnown RBP7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Q4KKZ1 196 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ttc9cQ810A3 171 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Zg16Q8K0C5 167 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 VsirQ9D659 308 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Timm23Q9WTQ8 209 aa7.56□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm20517G3UVU6 152 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Hs3st6Q5GFD5 342 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Olfr1373Q7TQT6 311 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Timm21Q8CCM6 249 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Dmrtc2Q8CGW9 370 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 1700013G24RikQ9DAC6 286 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Plac1Q9JI83 173 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 PerpQ9JK95 193 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Hils1Q9QYL0 170 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ighv1-7A0A075B5T7 117 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gng5Q80SZ7 68 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ly6g6eQ8K1T6 166 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Fbxl15Q91W61 300 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Znf22Q9ERU3 237 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Timm10bQ9WV96 100 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ighv7-2A0A0A6YX91 119 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tmem141A2AJB2 108 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Klrd1O54707 179 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Srsf2Q62093 221 aaKnown RBP7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gpr82Q8BZR0 328 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ncor2Q9WU42 2472 aaKnown RBP7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 CntfrO88507 372 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Zfp36l2P23949 484 aaKnown RBP7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 MlanaQ2TA50 113 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ndufa11Q9D8B4 141 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Alpk2Q91ZB0 2144 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Marf1Q8BJ34 1730 aaKnown RBP7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Frmpd3A0A140LIW3 1774 aa7.55□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Bcl6bO88282 474 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 YrdcQ3U5F4 280 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Klf2Q60843 354 aaKnown RBP7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 SnrpcQ62241 159 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 NmbQ9CR53 121 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Susd3Q9D176 269 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Mrps11Q9DCA2 191 aaKnown RBP7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tomm40Q9QYA2 361 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Igkv14-126A0A075B5K0 117 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Igkv4-51A0N8I8 119 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Fndc7A2AED3 737 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms