RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 F5H768 121 aa12□□□□□ -0.49
PHGDH-211ENST00000641213 TRBV20-1A0A075B6N2 111 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 GAGE6Q13070 117 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 SMIM9A6NGZ8 99 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 H7C2G1 150 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 SCGB1C2P0DMR2 95 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 SMCPP49901 116 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-211ENST00000641213 NPC2P61916 151 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 Q9H8V8 135 aa11.99□□□□□ -0.49
PHGDH-211ENST00000641213 CITED1Q99966 193 aa11.98□□□□□ -0.49
PHGDH-211ENST00000641213 DAND5Q8N907 189 aa11.97□□□□□ -0.49
PHGDH-211ENST00000641213 IFITM1P13164 125 aa11.96□□□□□ -0.49
PHGDH-211ENST00000641213 RNF183Q96D59 192 aa11.96□□□□□ -0.49
PHGDH-211ENST00000641213 IGLV4-60A0A075B6I1 120 aa11.96□□□□□ -0.5
PHGDH-211ENST00000641213 PCP4P48539 62 aa11.96□□□□□ -0.5
PHGDH-211ENST00000641213 CIRBPQ14011 172 aaKnown RBP11.96□□□□□ -0.5
PHGDH-211ENST00000641213 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.5
PHGDH-211ENST00000641213 Q1RN00 199 aa11.95□□□□□ -0.5
PHGDH-211ENST00000641213 ZNF625Q96I27 306 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-211ENST00000641213 NBEAL2Q6ZNJ1 2754 aa11.95□□□□□ -0.5
PHGDH-211ENST00000641213 GYPEP15421 78 aa11.95□□□□□ -0.5
PHGDH-211ENST00000641213 TEP1Q99973 2627 aaKnown RBP11.94□□□□□ -0.5
PHGDH-211ENST00000641213 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
PHGDH-211ENST00000641213 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
PHGDH-211ENST00000641213 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
PHGDH-211ENST00000641213 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
PHGDH-211ENST00000641213 TRBV30A0A0K0K1B3 111 aa11.92□□□□□ -0.5
PHGDH-211ENST00000641213 PRIMA1Q86XR5 153 aa11.92□□□□□ -0.5
PHGDH-211ENST00000641213 LYRM9A8MSI8 78 aa11.91□□□□□ -0.5
PHGDH-211ENST00000641213 J3QR89 54 aa11.91□□□□□ -0.5
PHGDH-211ENST00000641213 LINC00308Q8TCZ7 52 aa11.91□□□□□ -0.5
PHGDH-211ENST00000641213 PRO0255Q9UI72 69 aa11.91□□□□□ -0.5
PHGDH-211ENST00000641213 ATRQ13535 2644 aa11.91□□□□□ -0.5
PHGDH-211ENST00000641213 TRIAP1O43715 76 aa11.91□□□□□ -0.5
PHGDH-211ENST00000641213 APOC4P55056 127 aa11.91□□□□□ -0.5
PHGDH-211ENST00000641213 A0A0U1RRA0 63 aa11.9□□□□□ -0.5
PHGDH-211ENST00000641213 DEFB4AO15263 64 aa11.9□□□□□ -0.51
PHGDH-211ENST00000641213 HERV-K104P63124 156 aa11.9□□□□□ -0.51
PHGDH-211ENST00000641213 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.51
PHGDH-211ENST00000641213 MEIG1Q5JSS6 88 aa11.89□□□□□ -0.51
PHGDH-211ENST00000641213 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
PHGDH-211ENST00000641213 FOXI1Q12951 378 aa11.88□□□□□ -0.51
PHGDH-211ENST00000641213 IGHV4-28A0A0C4DH34 117 aa11.88□□□□□ -0.51
PHGDH-211ENST00000641213 WFDC9Q8NEX5 89 aa11.88□□□□□ -0.51
PHGDH-211ENST00000641213 COX7B2Q8TF08 81 aa11.88□□□□□ -0.51
PHGDH-211ENST00000641213 PAX4O43316 350 aa11.87□□□□□ -0.51
PHGDH-211ENST00000641213 C21orf62-AS1Q17RA5 79 aa11.87□□□□□ -0.51
PHGDH-211ENST00000641213 SOSTDC1Q6X4U4 206 aa11.87□□□□□ -0.51
PHGDH-211ENST00000641213 C9JAW5 83 aa11.87□□□□□ -0.51
PHGDH-211ENST00000641213 RPL13AP40429 203 aaKnown RBP11.87□□□□□ -0.51
PHGDH-211ENST00000641213 ATXN8Q156A1 80 aa11.87□□□□□ -0.51
PHGDH-211ENST00000641213 TEN1Q86WV5 123 aa11.87□□□□□ -0.51
PHGDH-211ENST00000641213 A0A096LPF7 62 aa11.86□□□□□ -0.51
PHGDH-211ENST00000641213 COPS9Q8WXC6 57 aa11.86□□□□□ -0.51
PHGDH-211ENST00000641213 LINC00959A0A1B0GUT2 108 aa11.85□□□□□ -0.51
PHGDH-211ENST00000641213 SLC25A20O43772 301 aa11.85□□□□□ -0.51
PHGDH-211ENST00000641213 A0A1B0GUV1 79 aa11.85□□□□□ -0.51
PHGDH-211ENST00000641213 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
PHGDH-211ENST00000641213 TOMM7Q9P0U1 55 aa11.85□□□□□ -0.51
PHGDH-211ENST00000641213 A0A087WZ39 114 aa11.84□□□□□ -0.51
PHGDH-211ENST00000641213 WIPF1O43516 503 aa11.84□□□□□ -0.51
PHGDH-211ENST00000641213 LINC01620Q4KN68 170 aa11.84□□□□□ -0.51
PHGDH-211ENST00000641213 Q8NAQ8 132 aa11.84□□□□□ -0.51
PHGDH-211ENST00000641213 CARD19Q96LW7 228 aa11.84□□□□□ -0.51
PHGDH-211ENST00000641213 DAD1P61803 113 aa11.83□□□□□ -0.51
PHGDH-211ENST00000641213 M0QXV9 152 aa11.83□□□□□ -0.52
PHGDH-211ENST00000641213 COX6CP09669 75 aa11.83□□□□□ -0.52
PHGDH-211ENST00000641213 C5orf38Q86SI9 138 aa11.83□□□□□ -0.52
PHGDH-211ENST00000641213 ANKRD29Q8N6D5 301 aa11.83□□□□□ -0.52
PHGDH-211ENST00000641213 PPDPFLQ8WWR9 84 aa11.83□□□□□ -0.52
PHGDH-211ENST00000641213 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
PHGDH-211ENST00000641213 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
PHGDH-211ENST00000641213 MIFP14174 115 aa11.82□□□□□ -0.52
PHGDH-211ENST00000641213 PPDPFQ9H3Y8 114 aa11.82□□□□□ -0.52
PHGDH-211ENST00000641213 IGHV4-30-4P0DP06 118 aa11.81□□□□□ -0.52
PHGDH-211ENST00000641213 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
PHGDH-211ENST00000641213 TRRAPQ9Y4A5 3859 aa11.81□□□□□ -0.52
PHGDH-211ENST00000641213 SS18Q15532 418 aa11.8□□□□□ -0.52
PHGDH-211ENST00000641213 CLEC2BQ92478 149 aa11.8□□□□□ -0.52
PHGDH-211ENST00000641213 ATP5G1P05496 136 aa11.79□□□□□ -0.52
PHGDH-211ENST00000641213 XCL1P47992 114 aa11.79□□□□□ -0.52
PHGDH-211ENST00000641213 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
PHGDH-211ENST00000641213 TRAV26-1A0A087WT03 109 aa11.78□□□□□ -0.52
PHGDH-211ENST00000641213 TRBV10-2A0A0K0K1G8 114 aa11.78□□□□□ -0.52
PHGDH-211ENST00000641213 CLPSL2Q6UWE3 100 aa11.78□□□□□ -0.52
PHGDH-211ENST00000641213 MIR7-3HGQ8N6C7 128 aa11.78□□□□□ -0.52
PHGDH-211ENST00000641213 LST1O00453 97 aa11.77□□□□□ -0.53
PHGDH-211ENST00000641213 SPART-AS1P0CW21 52 aa11.77□□□□□ -0.53
PHGDH-211ENST00000641213 SHISA2Q6UWI4 295 aa11.76□□□□□ -0.53
PHGDH-211ENST00000641213 SIGMAR1Q99720 223 aa11.76□□□□□ -0.53
PHGDH-211ENST00000641213 LINC00158P58513 81 aa11.75□□□□□ -0.53
PHGDH-211ENST00000641213 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
PHGDH-211ENST00000641213 LINC00269Q8N2A0 174 aa11.75□□□□□ -0.53
PHGDH-211ENST00000641213 F8P00451 2351 aa11.75□□□□□ -0.53
PHGDH-211ENST00000641213 Q8N3U1 123 aa11.74□□□□□ -0.53
PHGDH-211ENST00000641213 C6orf226Q5I0X4 101 aa11.74□□□□□ -0.53
PHGDH-211ENST00000641213 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
PHGDH-211ENST00000641213 HTN3P15516 51 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms