RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	MSMB	P08118	114 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	CTSG	P08311	255 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	BAALC-AS2	P0C853	105 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	C15orf32	Q32M92	178 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	C10orf99	Q6UWK7	81 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	CLEC19A	Q6UXS0	136 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	LINC00528	Q8N1L1	170 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	USP9Y	O00507	2555 aa	Predicted RBP	5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	CSPG4	Q6UVK1	2322 aa		5.82	□□□□□ -1.48
RTTN-223	ENST00000640931	COX7A2L	O14548	114 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	VPREB1	P12018	145 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	MPLKIP	Q8TAP9	179 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	SMAD5-AS1	Q9Y6J3	95 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	TRBV27	A0A0K0K1C4	114 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	IGIP	A6NJ69	53 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	C2orf66	Q6UXQ4	117 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	C8orf49	Q96NF6	230 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	KLK15	Q9H2R5	256 aa		5.81	□□□□□ -1.48
RTTN-223	ENST00000640931	NDUFS5	O43920	106 aa		5.8	□□□□□ -1.48
RTTN-223	ENST00000640931	IGHV3-11	P01762	117 aa		5.8	□□□□□ -1.48
RTTN-223	ENST00000640931	DEFB112	Q30KQ8	113 aa		5.8	□□□□□ -1.48
RTTN-223	ENST00000640931	C11orf68	Q9H3H3	251 aa	Known RBP	5.8	□□□□□ -1.48
RTTN-223	ENST00000640931	MSRB1	Q9NZV6	116 aa		5.8	□□□□□ -1.48
RTTN-223	ENST00000640931	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
RTTN-223	ENST00000640931	IGHV4-59	P01825	116 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	ESRG	Q1W209	222 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	ZFAND3	Q9H8U3	227 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	CLPSL1	A2RUU4	121 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931		A6NDX4	124 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	LYRM9	A8MSI8	78 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	IGKV2D-40	P01614	121 aa	Predicted RBP	5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	RPL28	P46779	137 aa	Known RBP	5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	ADAMTSL4-AS1	Q5T5F5	129 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	TMEM61	Q8N0U2	210 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	TMEM141	Q96I45	108 aa		5.79	□□□□□ -1.48
RTTN-223	ENST00000640931	PRAC2	D3DTV9	90 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931		K7EMT4	169 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	DEFB1	P60022	68 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	C19orf54	Q5BKX5	351 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	UNQ9165/PRO28630	Q6UXU0	137 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	LINC00846	Q9NV44	126 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	C22orf24	Q9Y442	160 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	TRAV23DV6	A0A075B6W5	121 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931		A0A0J9YXY3	114 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	ZNF575	Q86XF7	245 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	KRTAP1-3	Q8IUG1	177 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931		Q8TAT8	98 aa		5.78	□□□□□ -1.48
RTTN-223	ENST00000640931	APC	P25054	2843 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931		B4DSR2	109 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	C8orf87	E5RJ46	101 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931		M0R378	163 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	TRGV3	P03979	118 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	IGHV4-31	P0DP07	118 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931		Q1T7F1	81 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	FAM229B	Q4G0N7	80 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	SOSTDC1	Q6X4U4	206 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	KRTAP4-8	Q9BYQ9	185 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	CR1	P17927	2039 aa		5.77	□□□□□ -1.49
RTTN-223	ENST00000640931	SUMO2	P61956	95 aa	Known RBP	5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	MIA	Q16674	131 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	LINC01356	Q8N9X3	169 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	OBSCN-AS1	Q96MR7	158 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	LITAF	Q99732	161 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	ZNF80	P51504	273 aa	Predicted RBP	5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	DEFB113	Q30KQ7	82 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	ZNF876P	Q49A33	203 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	RMI2	Q96E14	147 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	TIMM17A	Q99595	171 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	LINC00588	Q9Y4M8	146 aa		5.76	□□□□□ -1.49
RTTN-223	ENST00000640931	MXRA5	Q9NR99	2828 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	IGKV3-7	A0A075B6H7	116 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	IGHV4-4	A0A075B6R2	117 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	PPP1R17	O96001	155 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	DYNLRB2	Q8TF09	96 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	OVOL2	Q9BRP0	275 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	TRAV12-3	A0A0B4J271	114 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	ADARB2-AS1	A8MUL3	147 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	MIF	P14174	115 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	UBE2B	P63146	152 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	PDE6H	Q13956	83 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931		Q6ZVQ6	151 aa		5.75	□□□□□ -1.49
RTTN-223	ENST00000640931		M0R381	172 aa		5.74	□□□□□ -1.49
RTTN-223	ENST00000640931	RNASE4	P34096	147 aa	Known RBP	5.74	□□□□□ -1.49
RTTN-223	ENST00000640931	C18orf65	Q6ZTR6	163 aa		5.74	□□□□□ -1.49
RTTN-223	ENST00000640931	UBE2L6	O14933	153 aa		5.73	□□□□□ -1.49
RTTN-223	ENST00000640931	TSHB	P01222	138 aa		5.73	□□□□□ -1.49
RTTN-223	ENST00000640931	PRR26	Q8N8Z3	221 aa		5.73	□□□□□ -1.49
RTTN-223	ENST00000640931	ZNF73	O43830	326 aa	Predicted RBP	5.73	□□□□□ -1.49
RTTN-223	ENST00000640931	SNURF	Q9Y675	71 aa		5.73	□□□□□ -1.49
RTTN-223	ENST00000640931	NF1	P21359	2839 aa		5.73	□□□□□ -1.49
RTTN-223	ENST00000640931	SETD2	Q9BYW2	2564 aa	Predicted RBP	5.73	□□□□□ -1.49
RTTN-223	ENST00000640931	SOCS3	O14543	225 aa		5.72	□□□□□ -1.49
RTTN-223	ENST00000640931	DSCR9	P59020	149 aa		5.72	□□□□□ -1.49
RTTN-223	ENST00000640931	KLK9	Q2XQG4	91 aa		5.72	□□□□□ -1.49
RTTN-223	ENST00000640931	PHF5A	Q7RTV0	110 aa	Known RBP	5.72	□□□□□ -1.49
RTTN-223	ENST00000640931	KLK9	Q9UKQ9	250 aa		5.72	□□□□□ -1.49
RTTN-223	ENST00000640931	TLN2	Q9Y4G6	2542 aa		5.72	□□□□□ -1.49

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