RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 RHOHQ15669 191 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 IQCJQ1A5X6 159 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 DAZ4Q86SG3 579 aaKnown RBP5.54□□□□□ -1.52
SCARB2-220ENST00000640076 ZNF664Q8N3J9 261 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 C20orf78Q9BR46 151 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 DAZ3Q9NR90 486 aaKnown RBP5.54□□□□□ -1.52
SCARB2-220ENST00000640076 PRO0255Q9UI72 69 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 LYRM7Q5U5X0 104 aa5.53□□□□□ -1.52
SCARB2-220ENST00000640076 LOC389332A0A1B0GUA5 103 aa5.53□□□□□ -1.52
SCARB2-220ENST00000640076 SDHAF1A6NFY7 115 aa5.53□□□□□ -1.52
SCARB2-220ENST00000640076 POLR2KP53803 58 aaKnown RBP5.53□□□□□ -1.52
SCARB2-220ENST00000640076 SMIM2Q9BVW6 85 aa5.53□□□□□ -1.52
SCARB2-220ENST00000640076 ST20Q9HBF5 79 aa5.53□□□□□ -1.52
SCARB2-220ENST00000640076 IGLV2-18A0A075B6J9 118 aa5.52□□□□□ -1.53
SCARB2-220ENST00000640076 TRBV7-3A0A075B6L6 115 aa5.52□□□□□ -1.53
SCARB2-220ENST00000640076 PAX4O43316 350 aa5.52□□□□□ -1.53
SCARB2-220ENST00000640076 IFI27P40305 119 aaPredicted RBP5.52□□□□□ -1.53
SCARB2-220ENST00000640076 RPL36AP83881 106 aaKnown RBP5.52□□□□□ -1.53
SCARB2-220ENST00000640076 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
SCARB2-220ENST00000640076 BAGE3Q86Y29 109 aa5.52□□□□□ -1.53
SCARB2-220ENST00000640076 STPG4Q8N801 248 aa5.52□□□□□ -1.53
SCARB2-220ENST00000640076 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
SCARB2-220ENST00000640076 VSIG2Q96IQ7 327 aa5.52□□□□□ -1.53
SCARB2-220ENST00000640076 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
SCARB2-220ENST00000640076 DEFB131BA0A096LNP1 70 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 A0A0J9YY99 117 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 TRBV27A0A0K0K1C4 114 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 NDUFA6P56556 154 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 NXT2Q9NPJ8 142 aaKnown RBP5.51□□□□□ -1.53
SCARB2-220ENST00000640076 DNAH7Q8WXX0 4024 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 TRAV10A0A0B4J240 114 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 SERF1AO75920 110 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 UBE2D3P61077 147 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 UBE2D2P62837 147 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 SCGB1D4Q6XE38 83 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 Q8N8P6 123 aa5.51□□□□□ -1.53
SCARB2-220ENST00000640076 LINC01546A6NGU7 62 aa5.5□□□□□ -1.53
SCARB2-220ENST00000640076 Q5XG85 94 aa5.5□□□□□ -1.53
SCARB2-220ENST00000640076 RBM12B-AS1Q9P1G2 102 aa5.5□□□□□ -1.53
SCARB2-220ENST00000640076 CYSLTR1Q9Y271 337 aa5.5□□□□□ -1.53
SCARB2-220ENST00000640076 TRAV8-6A0A0B4J262 113 aa5.49□□□□□ -1.53
SCARB2-220ENST00000640076 H3BNG1 76 aa5.49□□□□□ -1.53
SCARB2-220ENST00000640076 I3L3M4 83 aa5.49□□□□□ -1.53
SCARB2-220ENST00000640076 NUPR1O60356 82 aa5.49□□□□□ -1.53
SCARB2-220ENST00000640076 CHCHD1Q96BP2 118 aaKnown RBP5.49□□□□□ -1.53
SCARB2-220ENST00000640076 MEIG1Q5JSS6 88 aa5.49□□□□□ -1.53
SCARB2-220ENST00000640076 Q6ZRP5 223 aa5.49□□□□□ -1.53
SCARB2-220ENST00000640076 DEFB104AQ8WTQ1 72 aa5.49□□□□□ -1.53
SCARB2-220ENST00000640076 CHCHD10Q8WYQ3 142 aaPredicted RBP5.49□□□□□ -1.53
SCARB2-220ENST00000640076 DYNC2H1Q8NCM8 4307 aaKnown RBP5.48□□□□□ -1.53
SCARB2-220ENST00000640076 A0A096LPF7 62 aa5.48□□□□□ -1.53
SCARB2-220ENST00000640076 K7EMI3 77 aa5.48□□□□□ -1.53
SCARB2-220ENST00000640076 NDUFS5O43920 106 aa5.48□□□□□ -1.53
SCARB2-220ENST00000640076 DPM2O94777 84 aa5.48□□□□□ -1.53
SCARB2-220ENST00000640076 OR10D4PQ8NGN7 298 aa5.48□□□□□ -1.53
SCARB2-220ENST00000640076 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
SCARB2-220ENST00000640076 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 FCER1GP30273 86 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 ATP6V0E2Q8NHE4 81 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 CSMD3Q7Z407 3707 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 A0A096LNJ9 63 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 J3QQQ9 107 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 PMCHL1Q16048 86 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 ORMDL2Q53FV1 153 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 NTM-AS1Q6ZSK4 140 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 SH2D6Q7Z4S9 175 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 HIST3H2BBQ8N257 126 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 FAM19A2Q8N3H0 131 aa5.47□□□□□ -1.53
SCARB2-220ENST00000640076 TENM2Q9NT68 2774 aa5.46□□□□□ -1.53
SCARB2-220ENST00000640076 IGHV1-24A0A0C4DH33 117 aa5.46□□□□□ -1.54
SCARB2-220ENST00000640076 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
SCARB2-220ENST00000640076 C6orf223Q8N319 242 aa5.46□□□□□ -1.54
SCARB2-220ENST00000640076 TRBV6-8A0A0A6YYG3 113 aa5.46□□□□□ -1.54
SCARB2-220ENST00000640076 IGLL5B9A064 214 aa5.46□□□□□ -1.54
SCARB2-220ENST00000640076 C15orf53Q8NAA6 179 aa5.46□□□□□ -1.54
SCARB2-220ENST00000640076 CHCHD7Q9BUK0 85 aa5.46□□□□□ -1.54
SCARB2-220ENST00000640076 LAMTOR3Q9UHA4 124 aa5.46□□□□□ -1.54
SCARB2-220ENST00000640076 IFITM10A6NMD0 228 aa5.45□□□□□ -1.54
SCARB2-220ENST00000640076 HBDP02042 147 aa5.45□□□□□ -1.54
SCARB2-220ENST00000640076 CEMP1Q6PRD7 247 aaPredicted RBP5.45□□□□□ -1.54
SCARB2-220ENST00000640076 Q6ZRU5 148 aa5.45□□□□□ -1.54
SCARB2-220ENST00000640076 C20orf203Q8NBC4 194 aa5.45□□□□□ -1.54
SCARB2-220ENST00000640076 HIST1H4GQ99525 98 aa5.45□□□□□ -1.54
SCARB2-220ENST00000640076 MIEN1Q9BRT3 115 aa5.45□□□□□ -1.54
SCARB2-220ENST00000640076 TRBV25-1A0A075B6N4 114 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 SMIM1B2RUZ4 78 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 H0Y9J4 135 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 NDUFV3P56181 108 aaKnown RBP5.44□□□□□ -1.54
SCARB2-220ENST00000640076 C2orf66Q6UXQ4 117 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 TOMM6Q96B49 74 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 HIST1H2BLQ99880 126 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 STARD9Q9P2P6 4700 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 NUPR2A6NF83 97 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 SPINK8P0C7L1 97 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 RPL39P62891 51 aaKnown RBP5.44□□□□□ -1.54
SCARB2-220ENST00000640076 LYPD5Q6UWN5 251 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 TMEM243Q9BU79 118 aa5.44□□□□□ -1.54
SCARB2-220ENST00000640076 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms