RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 EFNA4P52798 201 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 ATXN8Q156A1 80 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 DEFB121Q5J5C9 76 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 Q6JHZ5 121 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 Q86TA4 180 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 FXYD6Q9H0Q3 95 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 NDUFA4L2Q9NRX3 87 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 TMEM14BQ9NUH8 114 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 TMEM14CQ9P0S9 112 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 DOCK2Q92608 1830 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 PTPRMP28827 1452 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 PTPRDP23468 1912 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 RGPD2P0DJD1 1756 aa0.91□□□□□ -2.26
CCDC7-216ENST00000640058 LRRC37A3O60309 1634 aa0.9□□□□□ -2.26
CCDC7-216ENST00000640058 TARBP1Q13395 1621 aaKnown RBP0.9□□□□□ -2.26
CCDC7-216ENST00000640058 AFDNP55196 1824 aaKnown RBP0.9□□□□□ -2.27
CCDC7-216ENST00000640058 CTXND1A0A1B0GTU2 59 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 LOC101927531A0A1B0GV80 90 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 TRBV6-4A0A1B0GX49 114 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 FAM223BA6NKX1 122 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 F8VRH5 84 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 NDUFB1O75438 58 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 IGHV3-30P01768 117 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 C3orf79P0CE67 100 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 IGHV3-30-5P0DP03 117 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 SPINT3P49223 89 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 CNBPP62633 177 aaKnown RBP0.9□□□□□ -2.27
CCDC7-216ENST00000640058 Q5VV11 94 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 COX7B2Q8TF08 81 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 PATE1Q8WXA2 126 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 FAM103A1Q9BTL3 118 aaKnown RBP0.9□□□□□ -2.27
CCDC7-216ENST00000640058 PRR15LQ9BU68 103 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 WFDC10AQ9H1F0 79 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 CDC42SE2Q9NRR3 84 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 HILPDAQ9Y5L2 63 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 V9GYV3 84 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 DIP2CQ9Y2E4 1556 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 LAMB4A4D0S4 1761 aa0.9□□□□□ -2.27
CCDC7-216ENST00000640058 NEXMIFQ5QGS0 1516 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 ASXL1Q8IXJ9 1541 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 SHROOM2Q13796 1616 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 ABCA6Q8N139 1617 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 RNF17Q9BXT8 1623 aaKnown RBP0.89□□□□□ -2.27
CCDC7-216ENST00000640058 RGPD1P0DJD0 1748 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 KIAA1549Q9HCM3 1950 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 CASP8AP2Q9UKL3 1982 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 MUC22E2RYF6 1773 aaPredicted RBP0.89□□□□□ -2.27
CCDC7-216ENST00000640058 CFAP43Q8NDM7 1665 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 ADGRB2O60241 1585 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 PRXQ9BXM0 1461 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 LOC110117498A0A087WWA1 95 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 A0A1B0GUT8 65 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 UQCR11O14957 56 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 MGPP08493 103 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 PDE6GP18545 87 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 COX17Q14061 63 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 KRTAP26-1Q6PEX3 210 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 SMIM4Q8WVI0 70 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 BPESC1Q9GZL8 116 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 PSENENQ9NZ42 101 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 SNURFQ9Y675 71 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 BTAF1O14981 1849 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 MAP2P11137 1827 aaKnown RBP0.89□□□□□ -2.27
CCDC7-216ENST00000640058 LAMC1P11047 1609 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 TOP2AP11388 1531 aaKnown RBP0.89□□□□□ -2.27
CCDC7-216ENST00000640058 HMGXB3Q12766 1538 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 EHBP1L1Q8N3D4 1523 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 MUC4Q99102 2169 aa0.89□□□□□ -2.27
CCDC7-216ENST00000640058 EML5Q05BV3 1969 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 PDCD11Q14690 1871 aaKnown RBP0.88□□□□□ -2.27
CCDC7-216ENST00000640058 ZNF142P52746 1687 aaPredicted RBP0.88□□□□□ -2.27
CCDC7-216ENST00000640058 PLCH1Q4KWH8 1693 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 PREX1Q8TCU6 1659 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 SNRNP200O75643 2136 aaKnown RBP0.88□□□□□ -2.27
CCDC7-216ENST00000640058 C1orf167Q5SNV9 1468 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 LAMA4Q16363 1823 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 M0R135 149 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 PRH1P02810 166 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 CCL3L1P16619 93 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 RPL37AP61513 92 aaKnown RBP0.88□□□□□ -2.27
CCDC7-216ENST00000640058 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
CCDC7-216ENST00000640058 TOMM5Q8N4H5 51 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 XRN1Q8IZH2 1706 aaKnown RBP0.88□□□□□ -2.27
CCDC7-216ENST00000640058 NRXN2Q9P2S2 1712 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 PIK3C2BO00750 1634 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 CDK13Q14004 1512 aaKnown RBP0.88□□□□□ -2.27
CCDC7-216ENST00000640058 CLASP1Q7Z460 1538 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 A0A1B0GUL6 1792 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 KDM3BQ7LBC6 1761 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 ARFGEF2Q9Y6D5 1785 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 CROCC2H7BZ55 1655 aa0.88□□□□□ -2.27
CCDC7-216ENST00000640058 MRC1P22897 1456 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 RALGAPBQ86X10 1494 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 NINQ8N4C6 2090 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 UBR1Q8IWV7 1749 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 RAPGEF6Q8TEU7 1601 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 M0R3E3 92 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 FREM3P0C091 2139 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 HMGA1P17096 107 aaKnown RBP0.87□□□□□ -2.27
CCDC7-216ENST00000640058 CCL18P55774 89 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms