RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 DNAL1Q4LDG9 190 aa-0.89□□□□□ -2.55
CCDC7-215ENST00000639629 LRRC20Q8TCA0 184 aa-0.89□□□□□ -2.55
CCDC7-215ENST00000639629 AP3S1Q92572 193 aa-0.89□□□□□ -2.55
CCDC7-215ENST00000639629 IFI27L1Q96BM0 104 aa-0.89□□□□□ -2.55
CCDC7-215ENST00000639629 MCEEQ96PE7 176 aa-0.89□□□□□ -2.55
CCDC7-215ENST00000639629 V9GYQ6 96 aa-0.89□□□□□ -2.55
CCDC7-215ENST00000639629 PLIN4Q96Q06 1357 aa-0.89□□□□□ -2.55
CCDC7-215ENST00000639629 AIPO00170 330 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 ADCYAP1P18509 176 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 MYL12AP19105 171 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 ARPP19P56211 112 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 TMEM86BQ8N661 226 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 MRPL34Q9BQ48 92 aaKnown RBP-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 SMIM7Q9BQ49 75 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 HIGD1BQ9P298 99 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 ERG28Q9UKR5 140 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 CLIP1P30622 1438 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 ROCK1Q13464 1354 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 TRAV30A0A087WSZ9 112 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 WRBO00258 174 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 TAX1BP3O14907 124 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 CBLN1P23435 193 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 CCL18P55774 89 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 MLLT11Q13015 90 aaPredicted RBP-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 PMAIP1Q13794 54 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 C9orf116Q5BN46 136 aaPredicted RBP-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 PDCL2Q8N4E4 241 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 CPSF1Q10570 1443 aaKnown RBP-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 I3L3M4 83 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 PSME3P61289 254 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 NAA20P61599 178 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 MRPS15P82914 257 aaKnown RBP-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 RSU1Q15404 277 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 TDRG1Q3Y452 100 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 LAMTOR3Q9UHA4 124 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 NDUFAF1Q9Y375 327 aa-0.9□□□□□ -2.55
CCDC7-215ENST00000639629 MYO5CQ9NQX4 1742 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 hADV38S2A0JD32 116 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 CLPSL1A2RUU4 121 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 EEF1E1-BLOC1S5C9J1V9 151 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 M0R135 149 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 CRHP06850 196 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 Q3ZCU0 254 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 TMEM170BQ5T4T1 132 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 TMCO2Q7Z6W1 182 aaPredicted RBP-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 VSTM2AQ8TAG5 236 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 RNASEH2CQ8TDP1 164 aaKnown RBP-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 CLEC2BQ92478 149 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 DRC3Q9H069 523 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 UQCC1Q9NVA1 299 aa-0.91□□□□□ -2.55
CCDC7-215ENST00000639629 HFM1A2PYH4 1435 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 FHAD1B1AJZ9 1412 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 TRBV19A0A075B6N1 114 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 TINCRA0A1B0GVN0 87 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 RAB19A4D1S5 217 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 H7C1C5 153 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 K7ERJ3 54 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 RPS17P08708 135 aaKnown RBP-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 SMIM17P0DL12 118 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 CARD18P57730 90 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 LCN6P62502 163 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 HEPN1Q6WQI6 88 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 MYH13Q9UKX3 1938 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 TCHHQ07283 1943 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 hCG_1818297A0A087WSY0 165 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 TRAV4A0A0B4J268 109 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 TRAV12-3A0A0B4J271 114 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 SUPT3HB4E1H0 165 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 CALUO43852 315 aaPredicted RBP-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 TTRP02766 147 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 C8GP07360 202 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 TMBIM6P55061 237 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 POLR2FP61218 127 aaKnown RBP-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 C1orf195Q5TG92 126 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 C8orf76Q96K31 380 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 SERPINB11Q96P15 392 aa-0.91□□□□□ -2.56
CCDC7-215ENST00000639629 CTXND1A0A1B0GTU2 59 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 EVPLLA8MZ36 301 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 F8VZ95 297 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 STAG3L3P0CL85 134 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 SLC25A6P12236 298 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 TPT1P13693 172 aaKnown RBP-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 MORN4Q8NDC4 146 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 KIAA1143Q96AT1 154 aaPredicted RBP-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 MRPL40Q9NQ50 206 aaKnown RBP-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 TAS2R8Q9NYW2 309 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 GLTPQ9NZD2 209 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 R4GMQ9 66 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 C5orf58C9J3I9 102 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 FTCDNL1E5RQL4 147 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 CCDC179H3BU77 68 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 CXCL1P09341 107 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 OCMP0CE72 109 aaPredicted RBP-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 SYT1P21579 422 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 RPL35P42766 123 aaKnown RBP-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 Q6AWC8 147 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 ATP6V1C2Q8NEY4 427 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 SLC35B4Q969S0 331 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 SPEF2Q9C093 1822 aa-0.92□□□□□ -2.56
CCDC7-215ENST00000639629 CST2P09228 141 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms