RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 IGLV2-18A0A075B6J9 118 aa10.5□□□□□ -0.73
SCARB2-216ENST00000639300 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
SCARB2-216ENST00000639300 CDK2AP2O75956 126 aa10.49□□□□□ -0.73
SCARB2-216ENST00000639300 A0A1B0GX51 115 aa10.49□□□□□ -0.73
SCARB2-216ENST00000639300 LYRM9A8MSI8 78 aa10.49□□□□□ -0.73
SCARB2-216ENST00000639300 RBMY1FQ15415 496 aaKnown RBP10.49□□□□□ -0.73
SCARB2-216ENST00000639300 ZNF580Q9UK33 172 aa10.49□□□□□ -0.73
SCARB2-216ENST00000639300 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
SCARB2-216ENST00000639300 MGAM2Q2M2H8 2515 aa10.48□□□□□ -0.73
SCARB2-216ENST00000639300 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
SCARB2-216ENST00000639300 MRPS36P82909 103 aaKnown RBP10.47□□□□□ -0.73
SCARB2-216ENST00000639300 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
SCARB2-216ENST00000639300 UBE2D1P51668 147 aa10.47□□□□□ -0.73
SCARB2-216ENST00000639300 IGLV4-69A0A075B6H9 119 aa10.47□□□□□ -0.73
SCARB2-216ENST00000639300 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
SCARB2-216ENST00000639300 JMJD7-PLA2G4BH0Y9G9 81 aa10.47□□□□□ -0.73
SCARB2-216ENST00000639300 HILS1P60008 231 aa10.46□□□□□ -0.73
SCARB2-216ENST00000639300 ATRQ13535 2644 aa10.46□□□□□ -0.73
SCARB2-216ENST00000639300 RBM3P98179 157 aaKnown RBP10.46□□□□□ -0.73
SCARB2-216ENST00000639300 LINC00242Q5T6M2 205 aa10.46□□□□□ -0.74
SCARB2-216ENST00000639300 C11orf45Q8TAV5 145 aa10.45□□□□□ -0.74
SCARB2-216ENST00000639300 C1orf158Q8N1D5 194 aa10.45□□□□□ -0.74
SCARB2-216ENST00000639300 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
SCARB2-216ENST00000639300 UBE2D3P61077 147 aa10.44□□□□□ -0.74
SCARB2-216ENST00000639300 UBE2D2P62837 147 aa10.44□□□□□ -0.74
SCARB2-216ENST00000639300 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
SCARB2-216ENST00000639300 H7C423 109 aa10.44□□□□□ -0.74
SCARB2-216ENST00000639300 TMEM256-PLSCR3K7ERE1 68 aa10.44□□□□□ -0.74
SCARB2-216ENST00000639300 ZNF292O60281 2723 aa10.44□□□□□ -0.74
SCARB2-216ENST00000639300 UFSP1Q6NVU6 142 aa10.44□□□□□ -0.74
SCARB2-216ENST00000639300 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
SCARB2-216ENST00000639300 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
SCARB2-216ENST00000639300 RNF183Q96D59 192 aa10.43□□□□□ -0.74
SCARB2-216ENST00000639300 Q6ZSN1 163 aa10.43□□□□□ -0.74
SCARB2-216ENST00000639300 LINC00643Q86TS7 51 aa10.43□□□□□ -0.74
SCARB2-216ENST00000639300 BRI3O95415 125 aa10.43□□□□□ -0.74
SCARB2-216ENST00000639300 SMIM20Q8N5G0 67 aa10.43□□□□□ -0.74
SCARB2-216ENST00000639300 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
SCARB2-216ENST00000639300 LINC00959A0A1B0GUT2 108 aa10.42□□□□□ -0.74
SCARB2-216ENST00000639300 DEFB131BA0A096LNP1 70 aa10.42□□□□□ -0.74
SCARB2-216ENST00000639300 MAST4O15021 2626 aa10.42□□□□□ -0.74
SCARB2-216ENST00000639300 NREPQ16612 68 aa10.42□□□□□ -0.74
SCARB2-216ENST00000639300 MIFP14174 115 aa10.41□□□□□ -0.74
SCARB2-216ENST00000639300 DNAH14Q0VDD8 3507 aa10.41□□□□□ -0.74
SCARB2-216ENST00000639300 DSPP15924 2871 aaKnown RBP10.41□□□□□ -0.74
SCARB2-216ENST00000639300 IGKV2-24A0A0C4DH68 120 aa10.41□□□□□ -0.74
SCARB2-216ENST00000639300 TIMM17BO60830 172 aa10.41□□□□□ -0.74
SCARB2-216ENST00000639300 CHCHD7Q9BUK0 85 aa10.4□□□□□ -0.74
SCARB2-216ENST00000639300 ATOX1O00244 68 aa10.4□□□□□ -0.74
SCARB2-216ENST00000639300 COX7BP24311 80 aa10.4□□□□□ -0.74
SCARB2-216ENST00000639300 CITED1Q99966 193 aa10.4□□□□□ -0.75
SCARB2-216ENST00000639300 KIF25-AS1Q9Y6Z4 181 aa10.4□□□□□ -0.75
SCARB2-216ENST00000639300 COX6A2Q02221 97 aa10.39□□□□□ -0.75
SCARB2-216ENST00000639300 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
SCARB2-216ENST00000639300 LST1O00453 97 aa10.39□□□□□ -0.75
SCARB2-216ENST00000639300 PLA2G2AP14555 144 aa10.39□□□□□ -0.75
SCARB2-216ENST00000639300 SDIM1Q6ZPB5 146 aa10.39□□□□□ -0.75
SCARB2-216ENST00000639300 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
SCARB2-216ENST00000639300 AKAP13Q12802 2813 aa10.38□□□□□ -0.75
SCARB2-216ENST00000639300 IGLV1-51P01701 117 aa10.38□□□□□ -0.75
SCARB2-216ENST00000639300 NDUFV3P56181 108 aaKnown RBP10.38□□□□□ -0.75
SCARB2-216ENST00000639300 CD164L2Q6UWJ8 174 aa10.38□□□□□ -0.75
SCARB2-216ENST00000639300 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
SCARB2-216ENST00000639300 IGLV4-60A0A075B6I1 120 aa10.37□□□□□ -0.75
SCARB2-216ENST00000639300 CFAP46Q8IYW2 2715 aa10.37□□□□□ -0.75
SCARB2-216ENST00000639300 XGP55808 180 aa10.37□□□□□ -0.75
SCARB2-216ENST00000639300 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-216ENST00000639300 CLUHP3Q96NS8 147 aa10.37□□□□□ -0.75
SCARB2-216ENST00000639300 FLNAP21333 2647 aaKnown RBP10.36□□□□□ -0.75
SCARB2-216ENST00000639300 TRAV23DV6A0A075B6W5 121 aa10.36□□□□□ -0.75
SCARB2-216ENST00000639300 SMIM11BQ8TCY0 68 aa10.36□□□□□ -0.75
SCARB2-216ENST00000639300 KPRPQ5T749 579 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-216ENST00000639300 AMELXQ99217 191 aa10.35□□□□□ -0.75
SCARB2-216ENST00000639300 PRB2P02812 416 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-216ENST00000639300 LINC00315P59091 139 aa10.34□□□□□ -0.75
SCARB2-216ENST00000639300 HIGD2AQ9BW72 106 aa10.33□□□□□ -0.76
SCARB2-216ENST00000639300 Q9UF83 564 aa10.33□□□□□ -0.76
SCARB2-216ENST00000639300 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
SCARB2-216ENST00000639300 IGHV4-30-4P0DP06 118 aa10.33□□□□□ -0.76
SCARB2-216ENST00000639300 BEAN1Q3B7T3 259 aa10.32□□□□□ -0.76
SCARB2-216ENST00000639300 SCXQ7RTU7 201 aa10.32□□□□□ -0.76
SCARB2-216ENST00000639300 C9orf116Q5BN46 136 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-216ENST00000639300 Q6ZQY7 126 aa10.32□□□□□ -0.76
SCARB2-216ENST00000639300 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
SCARB2-216ENST00000639300 SPEGQ15772 3267 aa10.31□□□□□ -0.76
SCARB2-216ENST00000639300 LELP1Q5T871 98 aa10.31□□□□□ -0.76
SCARB2-216ENST00000639300 SYCNQ0VAF6 134 aa10.31□□□□□ -0.76
SCARB2-216ENST00000639300 A0A096LNI7 61 aa10.3□□□□□ -0.76
SCARB2-216ENST00000639300 PRR3P79522 188 aaKnown RBP10.3□□□□□ -0.76
SCARB2-216ENST00000639300 FHL2Q14192 279 aa10.3□□□□□ -0.76
SCARB2-216ENST00000639300 UNQ6190/PRO20217Q6UXQ8 127 aa10.3□□□□□ -0.76
SCARB2-216ENST00000639300 COL27A1Q8IZC6 1860 aaPredicted RBP10.3□□□□□ -0.76
SCARB2-216ENST00000639300 FREM2Q5SZK8 3169 aa10.3□□□□□ -0.76
SCARB2-216ENST00000639300 UBE2AP49459 152 aa10.3□□□□□ -0.76
SCARB2-216ENST00000639300 SPATA25Q9BR10 227 aa10.29□□□□□ -0.76
SCARB2-216ENST00000639300 IGKV2-28A0A075B6P5 120 aa10.29□□□□□ -0.76
SCARB2-216ENST00000639300 CYSRT1A8MQ03 144 aa10.29□□□□□ -0.76
SCARB2-216ENST00000639300 IGKV2D-28P01615 120 aa10.29□□□□□ -0.76
SCARB2-216ENST00000639300 COL6A3P12111 3177 aa10.28□□□□□ -0.76
SCARB2-216ENST00000639300 PDE6GP18545 87 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms