RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 H7C423 109 aa6.24□□□□□ -1.41
CACNA1A-239ENST00000637297 TMEM170BQ5T4T1 132 aa6.24□□□□□ -1.41
CACNA1A-239ENST00000637297 AMMECR1LQ6DCA0 310 aa6.24□□□□□ -1.41
CACNA1A-239ENST00000637297 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
CACNA1A-239ENST00000637297 PCP2Q8IVA1 136 aa6.24□□□□□ -1.41
CACNA1A-239ENST00000637297 TMEM101Q96IK0 257 aa6.24□□□□□ -1.41
CACNA1A-239ENST00000637297 CHAC1Q9BUX1 264 aa6.24□□□□□ -1.41
CACNA1A-239ENST00000637297 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 E9PLD3 99 aa6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 Q6ZUT4 128 aa6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 OR5A1Q8NGJ0 315 aa6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 TP73-AS1Q9UF72 201 aa6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 CSDC2Q9Y534 153 aaKnown RBP6.23□□□□□ -1.41
CACNA1A-239ENST00000637297 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 A0A0J9YXV3 536 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 IBA57-AS1B1ANH7 110 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 RTL8CO15255 209 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 PSCAO43653 123 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 GAGE6Q13070 117 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 COL5A1-AS1Q5SY13 56 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 Q9HAA7 133 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 KLK12Q9UKR0 248 aa6.22□□□□□ -1.41
CACNA1A-239ENST00000637297 TRAV8-3A0A0A6YYJ7 113 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 TINCRA0A1B0GVN0 87 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 CRPP02741 224 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 ANGP03950 147 aaKnown RBP6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 ZNF25P17030 456 aaPredicted RBP6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 SEC11AP67812 179 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 HSD52Q0P140 79 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 MPV17L2Q567V2 206 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 GEMIN7Q9H840 131 aaKnown RBP6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
CACNA1A-239ENST00000637297 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 ZNF22P17026 224 aaPredicted RBP6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 Q8N3U1 123 aa6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 RMI2Q96E14 147 aa6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 TM2D2Q9BX73 214 aa6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 TTTY13Q9BZ97 58 aa6.2□□□□□ -1.42
CACNA1A-239ENST00000637297 ZNF815PA8K554 130 aa6.19□□□□□ -1.42
CACNA1A-239ENST00000637297 H3BRM9 83 aa6.19□□□□□ -1.42
CACNA1A-239ENST00000637297 LEPROTO15243 131 aa6.19□□□□□ -1.42
CACNA1A-239ENST00000637297 UBE2D1P51668 147 aa6.19□□□□□ -1.42
CACNA1A-239ENST00000637297 BVES-AS1Q5T3Y7 98 aa6.19□□□□□ -1.42
CACNA1A-239ENST00000637297 LINC00469Q8N7U9 141 aa6.19□□□□□ -1.42
CACNA1A-239ENST00000637297 MAPKAPK5-AS1Q8N8E1 139 aa6.19□□□□□ -1.42
CACNA1A-239ENST00000637297 J3QQQ9 107 aa6.18□□□□□ -1.42
CACNA1A-239ENST00000637297 RBX1P62877 108 aa6.18□□□□□ -1.42
CACNA1A-239ENST00000637297 HERVK_113P63121 156 aa6.18□□□□□ -1.42
CACNA1A-239ENST00000637297 TNP2Q05952 138 aa6.18□□□□□ -1.42
CACNA1A-239ENST00000637297 SCGB1D4Q6XE38 83 aa6.18□□□□□ -1.42
CACNA1A-239ENST00000637297 CDC42SE2Q9NRR3 84 aa6.18□□□□□ -1.42
CACNA1A-239ENST00000637297 COX11Q9Y6N1 276 aa6.18□□□□□ -1.42
CACNA1A-239ENST00000637297 IGKV2D-24A0A075B6R9 120 aa6.17□□□□□ -1.42
CACNA1A-239ENST00000637297 TRAV13-1A0A0B4J241 112 aa6.17□□□□□ -1.42
CACNA1A-239ENST00000637297 A0A1B0GUV1 79 aa6.17□□□□□ -1.42
CACNA1A-239ENST00000637297 TAL2Q16559 108 aa6.17□□□□□ -1.42
CACNA1A-239ENST00000637297 FAM19A3Q7Z5A8 133 aa6.17□□□□□ -1.42
CACNA1A-239ENST00000637297 LINC00269Q8N2A0 174 aa6.17□□□□□ -1.42
CACNA1A-239ENST00000637297 ORAOV1Q8WV07 137 aa6.17□□□□□ -1.42
CACNA1A-239ENST00000637297 IGHV3-64A0A075B6Q5 118 aa6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 A0A1B0GV90 55 aa6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 A6NDN8 102 aa6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 LINC00242Q5T6M2 205 aa6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 C1orf43Q9BWL3 253 aa6.16□□□□□ -1.42
CACNA1A-239ENST00000637297 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 IGHV1-58A0A0C4DH39 117 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 IGKV3OR2-268A0A0C4DH90 116 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 GCSHP23434 173 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 REG3AQ06141 175 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 MIAQ16674 131 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 ENHOQ6UWT2 76 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 HIST1H4GQ99525 98 aa6.15□□□□□ -1.42
CACNA1A-239ENST00000637297 SPINK8P0C7L1 97 aa6.14□□□□□ -1.43
CACNA1A-239ENST00000637297 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
CACNA1A-239ENST00000637297 CEND1Q8N111 149 aa6.14□□□□□ -1.43
CACNA1A-239ENST00000637297 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
CACNA1A-239ENST00000637297 A0A087WTM6 91 aa6.13□□□□□ -1.43
CACNA1A-239ENST00000637297 TRAV8-4A0A0B4J246 113 aa6.13□□□□□ -1.43
CACNA1A-239ENST00000637297 COX6A2Q02221 97 aa6.13□□□□□ -1.43
CACNA1A-239ENST00000637297 SRSF9Q13242 221 aaKnown RBP eCLIP6.13□□□□□ -1.43
CACNA1A-239ENST00000637297 PRR34Q9NV39 138 aa6.13□□□□□ -1.43
CACNA1A-239ENST00000637297 DNAH10Q8IVF4 4471 aa6.13□□□□□ -1.43
CACNA1A-239ENST00000637297 IGLV10-54A0A075B6I4 117 aa6.12□□□□□ -1.43
CACNA1A-239ENST00000637297 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
CACNA1A-239ENST00000637297 SS18Q15532 418 aa6.12□□□□□ -1.43
CACNA1A-239ENST00000637297 NDUFA12Q9UI09 145 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms