RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 NIPBLQ6KC79 2804 aaeCLIP13.03□□□□□ -0.32
CLN8-211ENST00000636934 HERV-K104P63124 156 aa13.02□□□□□ -0.32
CLN8-211ENST00000636934 SFTA2Q6UW10 78 aa13.02□□□□□ -0.32
CLN8-211ENST00000636934 Q9H8V8 135 aa13.02□□□□□ -0.32
CLN8-211ENST00000636934 PRO0255Q9UI72 69 aa13.02□□□□□ -0.32
CLN8-211ENST00000636934 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.32
CLN8-211ENST00000636934 OTOGQ6ZRI0 2925 aa13.02□□□□□ -0.33
CLN8-211ENST00000636934 F5H768 121 aa13.02□□□□□ -0.33
CLN8-211ENST00000636934 Q1RN00 199 aa13.02□□□□□ -0.33
CLN8-211ENST00000636934 ATP6V0E2Q8NHE4 81 aa13.02□□□□□ -0.33
CLN8-211ENST00000636934 TEX48A0A1B0GUV7 120 aa13.01□□□□□ -0.33
CLN8-211ENST00000636934 EIF4EBP3O60516 100 aaPredicted RBP13□□□□□ -0.33
CLN8-211ENST00000636934 GYPEP15421 78 aa13□□□□□ -0.33
CLN8-211ENST00000636934 C2CD3Q4AC94 2353 aa13□□□□□ -0.33
CLN8-211ENST00000636934 TCL1BO95988 128 aa12.99□□□□□ -0.33
CLN8-211ENST00000636934 WFDC9Q8NEX5 89 aa12.99□□□□□ -0.33
CLN8-211ENST00000636934 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
CLN8-211ENST00000636934 NOTCH2Q04721 2471 aa12.99□□□□□ -0.33
CLN8-211ENST00000636934 FAM222AQ5U5X8 452 aa12.99□□□□□ -0.33
CLN8-211ENST00000636934 PRIMA1Q86XR5 153 aa12.99□□□□□ -0.33
CLN8-211ENST00000636934 SPATA3Q8NHX4 192 aa12.99□□□□□ -0.33
CLN8-211ENST00000636934 ETDBQ3ZM63 59 aa12.98□□□□□ -0.33
CLN8-211ENST00000636934 TRBV30A0A0K0K1B3 111 aa12.97□□□□□ -0.33
CLN8-211ENST00000636934 H7C2G1 150 aa12.97□□□□□ -0.33
CLN8-211ENST00000636934 ZNF625Q96I27 306 aaPredicted RBP12.97□□□□□ -0.33
CLN8-211ENST00000636934 WIPF1O43516 503 aa12.97□□□□□ -0.33
CLN8-211ENST00000636934 DEFB135Q30KP9 77 aa12.97□□□□□ -0.33
CLN8-211ENST00000636934 PAX4O43316 350 aa12.96□□□□□ -0.34
CLN8-211ENST00000636934 MIFP14174 115 aa12.96□□□□□ -0.34
CLN8-211ENST00000636934 MEIG1Q5JSS6 88 aa12.96□□□□□ -0.34
CLN8-211ENST00000636934 PPDPFQ9H3Y8 114 aa12.96□□□□□ -0.34
CLN8-211ENST00000636934 IGLV4-60A0A075B6I1 120 aa12.95□□□□□ -0.34
CLN8-211ENST00000636934 MTURNQ8N3F0 131 aa12.95□□□□□ -0.34
CLN8-211ENST00000636934 FN1P02751 2386 aaKnown RBP12.95□□□□□ -0.34
CLN8-211ENST00000636934 A0A1B0GUV1 79 aa12.94□□□□□ -0.34
CLN8-211ENST00000636934 COX6CP09669 75 aa12.94□□□□□ -0.34
CLN8-211ENST00000636934 NPC2P61916 151 aa12.94□□□□□ -0.34
CLN8-211ENST00000636934 ATXN8Q156A1 80 aa12.94□□□□□ -0.34
CLN8-211ENST00000636934 SH2D6Q7Z4S9 175 aa12.94□□□□□ -0.34
CLN8-211ENST00000636934 LINC00308Q8TCZ7 52 aa12.94□□□□□ -0.34
CLN8-211ENST00000636934 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
CLN8-211ENST00000636934 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
CLN8-211ENST00000636934 DAD1P61803 113 aa12.93□□□□□ -0.34
CLN8-211ENST00000636934 TEP1Q99973 2627 aaKnown RBP12.92□□□□□ -0.34
CLN8-211ENST00000636934 M0QXV9 152 aa12.92□□□□□ -0.34
CLN8-211ENST00000636934 SMCPP49901 116 aaPredicted RBP12.92□□□□□ -0.34
CLN8-211ENST00000636934 ICOSQ9Y6W8 199 aa12.92□□□□□ -0.34
CLN8-211ENST00000636934 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
CLN8-211ENST00000636934 TMEM262E9PQX1 116 aa12.92□□□□□ -0.34
CLN8-211ENST00000636934 DAND5Q8N907 189 aa12.92□□□□□ -0.34
CLN8-211ENST00000636934 IGHV3OR16-9A0A0B4J2B5 98 aa12.91□□□□□ -0.34
CLN8-211ENST00000636934 A0A087WZ39 114 aa12.9□□□□□ -0.34
CLN8-211ENST00000636934 LINC00959A0A1B0GUT2 108 aa12.9□□□□□ -0.34
CLN8-211ENST00000636934 TRIAP1O43715 76 aa12.9□□□□□ -0.34
CLN8-211ENST00000636934 ATP5G1P05496 136 aa12.9□□□□□ -0.34
CLN8-211ENST00000636934 SS18Q15532 418 aa12.9□□□□□ -0.34
CLN8-211ENST00000636934 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
CLN8-211ENST00000636934 TRAV26-1A0A087WT03 109 aa12.89□□□□□ -0.35
CLN8-211ENST00000636934 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
CLN8-211ENST00000636934 PCP4P48539 62 aa12.89□□□□□ -0.35
CLN8-211ENST00000636934 TEN1Q86WV5 123 aa12.89□□□□□ -0.35
CLN8-211ENST00000636934 Q8NAQ8 132 aa12.89□□□□□ -0.35
CLN8-211ENST00000636934 FOXI1Q12951 378 aa12.88□□□□□ -0.35
CLN8-211ENST00000636934 HIVEP1P15822 2718 aa12.87□□□□□ -0.35
CLN8-211ENST00000636934 SLC25A20O43772 301 aa12.87□□□□□ -0.35
CLN8-211ENST00000636934 LINC01561Q8N1V8 128 aa12.87□□□□□ -0.35
CLN8-211ENST00000636934 PPDPFLQ8WWR9 84 aa12.87□□□□□ -0.35
CLN8-211ENST00000636934 TOMM7Q9P0U1 55 aa12.87□□□□□ -0.35
CLN8-211ENST00000636934 C9JAW5 83 aa12.86□□□□□ -0.35
CLN8-211ENST00000636934 IGHV4-30-4P0DP06 118 aa12.86□□□□□ -0.35
CLN8-211ENST00000636934 A0A0U1RRA0 63 aa12.86□□□□□ -0.35
CLN8-211ENST00000636934 DEFB4AO15263 64 aa12.86□□□□□ -0.35
CLN8-211ENST00000636934 LINC01620Q4KN68 170 aa12.86□□□□□ -0.35
CLN8-211ENST00000636934 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
CLN8-211ENST00000636934 A0A096LPF7 62 aa12.83□□□□□ -0.36
CLN8-211ENST00000636934 IBA57-AS1B1ANH7 110 aa12.83□□□□□ -0.36
CLN8-211ENST00000636934 MRPL23Q16540 153 aaKnown RBP12.83□□□□□ -0.36
CLN8-211ENST00000636934 SOSTDC1Q6X4U4 206 aa12.83□□□□□ -0.36
CLN8-211ENST00000636934 C5orf38Q86SI9 138 aa12.83□□□□□ -0.36
CLN8-211ENST00000636934 TRBV10-2A0A0K0K1G8 114 aa12.81□□□□□ -0.36
CLN8-211ENST00000636934 ANKRD29Q8N6D5 301 aa12.81□□□□□ -0.36
CLN8-211ENST00000636934 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
CLN8-211ENST00000636934 VWFP04275 2813 aa12.81□□□□□ -0.36
CLN8-211ENST00000636934 GAGE12HA6NDE8 117 aa12.81□□□□□ -0.36
CLN8-211ENST00000636934 TRAV13-2A0A0B4J235 113 aa12.8□□□□□ -0.36
CLN8-211ENST00000636934 XCL1P47992 114 aa12.8□□□□□ -0.36
CLN8-211ENST00000636934 LINC00158P58513 81 aa12.8□□□□□ -0.36
CLN8-211ENST00000636934 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
CLN8-211ENST00000636934 LST1O00453 97 aa12.79□□□□□ -0.36
CLN8-211ENST00000636934 C6orf226Q5I0X4 101 aa12.79□□□□□ -0.36
CLN8-211ENST00000636934 Q8IZM0 81 aa12.79□□□□□ -0.36
CLN8-211ENST00000636934 MIR7-3HGQ8N6C7 128 aa12.79□□□□□ -0.36
CLN8-211ENST00000636934 TENM1Q9UKZ4 2725 aa12.78□□□□□ -0.36
CLN8-211ENST00000636934 H3BT86 120 aa12.77□□□□□ -0.36
CLN8-211ENST00000636934 LELP1Q5T871 98 aa12.77□□□□□ -0.36
CLN8-211ENST00000636934 SHISA2Q6UWI4 295 aa12.77□□□□□ -0.36
CLN8-211ENST00000636934 CD164L2Q6UWJ8 174 aa12.77□□□□□ -0.36
CLN8-211ENST00000636934 CARD19Q96LW7 228 aa12.77□□□□□ -0.36
CLN8-211ENST00000636934 SIGMAR1Q99720 223 aa12.77□□□□□ -0.36
CLN8-211ENST00000636934 ATRQ13535 2644 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms