RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 A0A096LPF7 62 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 ZNF843Q8N446 348 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 TMEM262E9PQX1 116 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 DEFB130BP0DP73 79 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 DEFB130AP0DP74 79 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 GAGE2EQ4V326 116 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 A8MTW9 85 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 NDUFA1O15239 70 aa9.99□□□□□ -0.81
CACNA1A-228ENST00000636610 HERVK_113P63121 156 aa9.98□□□□□ -0.81
CACNA1A-228ENST00000636610 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
CACNA1A-228ENST00000636610 DNAJC30Q96LL9 226 aa9.98□□□□□ -0.81
CACNA1A-228ENST00000636610 EDA2RQ9HAV5 297 aa9.98□□□□□ -0.81
CACNA1A-228ENST00000636610 TRGV4A0A0C4DH28 118 aa9.97□□□□□ -0.81
CACNA1A-228ENST00000636610 YAE1D1Q9NRH1 226 aa9.97□□□□□ -0.81
CACNA1A-228ENST00000636610 Q9HAA7 133 aa9.97□□□□□ -0.81
CACNA1A-228ENST00000636610 LST1O00453 97 aa9.96□□□□□ -0.81
CACNA1A-228ENST00000636610 C5orf38Q86SI9 138 aa9.96□□□□□ -0.81
CACNA1A-228ENST00000636610 PFN2P35080 140 aa9.96□□□□□ -0.82
CACNA1A-228ENST00000636610 TIRAPP58753 221 aa9.96□□□□□ -0.82
CACNA1A-228ENST00000636610 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.82
CACNA1A-228ENST00000636610 CDC42SE2Q9NRR3 84 aa9.96□□□□□ -0.82
CACNA1A-228ENST00000636610 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.82
CACNA1A-228ENST00000636610 GIG44P09565 113 aaPredicted RBP9.96□□□□□ -0.82
CACNA1A-228ENST00000636610 ATRQ13535 2644 aa9.95□□□□□ -0.82
CACNA1A-228ENST00000636610 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
CACNA1A-228ENST00000636610 B5MCH6 92 aa9.95□□□□□ -0.82
CACNA1A-228ENST00000636610 KRTAP1-3Q8IUG1 177 aa9.95□□□□□ -0.82
CACNA1A-228ENST00000636610 C3orf56Q8N813 242 aa9.95□□□□□ -0.82
CACNA1A-228ENST00000636610 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
CACNA1A-228ENST00000636610 SS18L2Q9UHA2 77 aa9.94□□□□□ -0.82
CACNA1A-228ENST00000636610 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 LINC00158P58513 81 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 FAM218AQ96MZ4 157 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 CITED1Q99966 193 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 LINC01006Q8NI28 216 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
CACNA1A-228ENST00000636610 DEFB4AO15263 64 aa9.92□□□□□ -0.82
CACNA1A-228ENST00000636610 F5H768 121 aa9.92□□□□□ -0.82
CACNA1A-228ENST00000636610 IFITM1P13164 125 aa9.92□□□□□ -0.82
CACNA1A-228ENST00000636610 DAZ2Q13117 558 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-228ENST00000636610 DAZ4Q86SG3 579 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-228ENST00000636610 DAZ3Q9NR90 486 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-228ENST00000636610 NHLRC4P0CG21 123 aaPredicted RBP9.91□□□□□ -0.82
CACNA1A-228ENST00000636610 SMR3AQ99954 134 aa9.91□□□□□ -0.82
CACNA1A-228ENST00000636610 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
CACNA1A-228ENST00000636610 ATP5G1P05496 136 aa9.9□□□□□ -0.82
CACNA1A-228ENST00000636610 NDUFV3P56181 108 aaKnown RBP9.9□□□□□ -0.82
CACNA1A-228ENST00000636610 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.83
CACNA1A-228ENST00000636610 PDZD2O15018 2839 aa9.9□□□□□ -0.83
CACNA1A-228ENST00000636610 XCL1P47992 114 aa9.89□□□□□ -0.83
CACNA1A-228ENST00000636610 H3BT86 120 aa9.89□□□□□ -0.83
CACNA1A-228ENST00000636610 OR13C6PQ8NH95 151 aa9.89□□□□□ -0.83
CACNA1A-228ENST00000636610 TIMM17BO60830 172 aa9.88□□□□□ -0.83
CACNA1A-228ENST00000636610 BAALC-AS2P0C853 105 aa9.88□□□□□ -0.83
CACNA1A-228ENST00000636610 LINC00337Q8N6G1 96 aa9.88□□□□□ -0.83
CACNA1A-228ENST00000636610 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
CACNA1A-228ENST00000636610 IL17DQ8TAD2 202 aa9.88□□□□□ -0.83
CACNA1A-228ENST00000636610 COX7A2LO14548 114 aa9.88□□□□□ -0.83
CACNA1A-228ENST00000636610 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
CACNA1A-228ENST00000636610 SND1-IT1Q9HBX3 110 aa9.87□□□□□ -0.83
CACNA1A-228ENST00000636610 TEP1Q99973 2627 aaKnown RBP9.87□□□□□ -0.83
CACNA1A-228ENST00000636610 OTOGQ6ZRI0 2925 aa9.86□□□□□ -0.83
CACNA1A-228ENST00000636610 Q8N3U1 123 aa9.86□□□□□ -0.83
CACNA1A-228ENST00000636610 IGLV10-54A0A075B6I4 117 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 PAX4O43316 350 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 TRRAPQ9Y4A5 3859 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 CRPP02741 224 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 SLPIP03973 132 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 GAGE2AQ6NT46 116 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 LINC00482Q8N8I6 264 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
CACNA1A-228ENST00000636610 M0QXV9 152 aa9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 FHL2Q14192 279 aa9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 IGKV2-28A0A075B6P5 120 aa9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 IGKV2D-28P01615 120 aa9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 SHISA2Q6UWI4 295 aa9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 SPATA3Q8NHX4 192 aa9.84□□□□□ -0.83
CACNA1A-228ENST00000636610 A0A087WYN8 130 aa9.83□□□□□ -0.84
CACNA1A-228ENST00000636610 GYPEP15421 78 aa9.83□□□□□ -0.84
CACNA1A-228ENST00000636610 C19orf73Q9NVV2 129 aa9.83□□□□□ -0.84
CACNA1A-228ENST00000636610 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
CACNA1A-228ENST00000636610 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
CACNA1A-228ENST00000636610 SMCR5Q8TEV8 140 aa9.83□□□□□ -0.84
CACNA1A-228ENST00000636610 CCL18P55774 89 aa9.82□□□□□ -0.84
CACNA1A-228ENST00000636610 SMIM11BQ8TCY0 68 aa9.82□□□□□ -0.84
CACNA1A-228ENST00000636610 IGLV1-51P01701 117 aa9.81□□□□□ -0.84
CACNA1A-228ENST00000636610 LRRC75A-AS1Q8N1F1 130 aa9.81□□□□□ -0.84
CACNA1A-228ENST00000636610 CSNK1G2-AS1Q8NCQ2 148 aa9.81□□□□□ -0.84
CACNA1A-228ENST00000636610 ANK3Q12955 4377 aaKnown RBP9.8□□□□□ -0.84
CACNA1A-228ENST00000636610 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
CACNA1A-228ENST00000636610 TRBV6-4A0A1B0GX49 114 aa9.8□□□□□ -0.84
CACNA1A-228ENST00000636610 PF4P02776 101 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms