RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 IGHV3-38A0A0C4DH36 116 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 LEPROTO15243 131 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 SMIM13P0DJ93 91 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 UBE2D3P61077 147 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 UBE2D2P62837 147 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 SCGB1D4Q6XE38 83 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 SLC25A29Q8N8R3 303 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 OPRPNQ99935 248 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-230ENST00000634433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-230ENST00000634433 TMEM223A0PJW6 202 aa5.08□□□□□ -1.6
BRCA1-230ENST00000634433 IGKV2-29A2NJV5 120 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-230ENST00000634433 LGALS3P17931 250 aaKnown RBP5.08□□□□□ -1.6
BRCA1-230ENST00000634433 GAGE12JA6NER3 117 aa5.07□□□□□ -1.6
BRCA1-230ENST00000634433 H7C423 109 aa5.07□□□□□ -1.6
BRCA1-230ENST00000634433 ZNF22P17026 224 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-230ENST00000634433 GAGE4Q13068 117 aa5.07□□□□□ -1.6
BRCA1-230ENST00000634433 NOTCH3Q9UM47 2321 aa5.07□□□□□ -1.6
BRCA1-230ENST00000634433 A0A0J9YXV3 536 aa5.07□□□□□ -1.6
BRCA1-230ENST00000634433 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
BRCA1-230ENST00000634433 J3QQQ9 107 aa5.07□□□□□ -1.6
BRCA1-230ENST00000634433 LYRM9A8MSI8 78 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 C8orf87E5RJ46 101 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 UBE2L6O14933 153 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 LINC00612Q8N6U2 182 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 TMEM243Q9BU79 118 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 A0A087WZ39 114 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 C9JAW5 83 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 SRSF9Q13242 221 aaKnown RBP eCLIP5.06□□□□□ -1.6
BRCA1-230ENST00000634433 FHL2Q14192 279 aa5.06□□□□□ -1.6
BRCA1-230ENST00000634433 LINC00694P0DN24 101 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 FXYD2P54710 66 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 AMMECR1LQ6DCA0 310 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 CEMP1Q6PRD7 247 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-230ENST00000634433 Q6ZUT4 128 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 FAM104AQ969W3 186 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 J3KT08 172 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 UBE2D1P51668 147 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 OR5A1Q8NGJ0 315 aa5.05□□□□□ -1.6
BRCA1-230ENST00000634433 DEFB130BP0DP73 79 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 DEFB130AP0DP74 79 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 HERVK_113P63121 156 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 Q6ZVQ6 151 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 GTF2H5Q6ZYL4 71 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 SBSPONQ8IVN8 264 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 FAM218AQ96MZ4 157 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 NHP2Q9NX24 153 aaKnown RBP5.04□□□□□ -1.6
BRCA1-230ENST00000634433 IGHV1-58A0A0C4DH39 117 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 A0A0J9YY99 117 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 MIFP14174 115 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 NTM-AS1Q6ZSK4 140 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 FAM19A3Q7Z5A8 133 aa5.04□□□□□ -1.6
BRCA1-230ENST00000634433 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-230ENST00000634433 C12orf74Q32Q52 190 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 RNASE13Q5GAN3 156 aaKnown RBP5.03□□□□□ -1.6
BRCA1-230ENST00000634433 RAB37Q96AX2 223 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 PRO0255Q9UI72 69 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 NBEAL1Q6ZS30 2694 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 A0A1B0GWB2 263 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 H3BUT2 72 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 INAFM2P0DMQ5 153 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 IGHV3-30-3P0DP02 117 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 FABP2P12104 132 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 TSPEAR-AS2P59090 65 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 ZFAND6Q6FIF0 208 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 CDC42SE2Q9NRR3 84 aa5.03□□□□□ -1.6
BRCA1-230ENST00000634433 IGLV5-45A0A087WSX0 123 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 TRBV6-8A0A0A6YYG3 113 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 RPL18AQ02543 176 aaKnown RBP5.02□□□□□ -1.61
BRCA1-230ENST00000634433 DEFB135Q30KP9 77 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 FAM222AQ5U5X8 452 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 C3orf56Q8N813 242 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 VSIG2Q96IQ7 327 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 TMEM126AQ9H061 195 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 LOC100131303A0A0U1RQF7 123 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 REG3AQ06141 175 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 ATP6V0E2Q8NHE4 81 aa5.02□□□□□ -1.61
BRCA1-230ENST00000634433 IGHV3-64A0A075B6Q5 118 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 ATP5G1P05496 136 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 IGHV4-30-4P0DP06 118 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 DAD1P61803 113 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 CCDC179H3BU77 68 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 PAX4O43316 350 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 SPART-AS1P0CW21 52 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 CHCHD5Q9BSY4 110 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 NDUFA12Q9UI09 145 aa5.01□□□□□ -1.61
BRCA1-230ENST00000634433 TRAV13-1A0A0B4J241 112 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 IGLL5B9A064 214 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 K7EP34 96 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 IGHV3-30P01768 117 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 SPINK8P0C7L1 97 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 IGHV3-30-5P0DP03 117 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 RPL24P83731 157 aaKnown RBP5□□□□□ -1.61
BRCA1-230ENST00000634433 LINC00242Q5T6M2 205 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 CDKN2A-AS1Q9UH64 79 aa5□□□□□ -1.61
BRCA1-230ENST00000634433 A0A0J9YXY3 114 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms