RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ALPK2Q86TB3 2170 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 TNRC6BQ9UPQ9 1833 aaKnown RBP1.75□□□□□ -2.13
BRCA1-229ENST00000621897 MRC1P22897 1456 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 MDC1Q14676 2089 aaKnown RBP1.75□□□□□ -2.13
BRCA1-229ENST00000621897 ABCA5Q8WWZ7 1642 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 FCGBPQ9Y6R7 5405 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-229ENST00000621897 ADGRB2O60241 1585 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 IGKV3D-7A0A0C4DH55 119 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 IGKV2-24A0A0C4DH68 120 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 IGKV3OR2-268A0A0C4DH90 116 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 A0A1B0GWA3 101 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 CEBPZOSA8MTT3 80 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 PPP1R17O96001 155 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 COX8AP10176 69 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 SPAG11BQ08648 103 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 FAM74A4Q5TZK3 123 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 SPAG11AQ6PDA7 123 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 COX7B2Q8TF08 81 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 PSENENQ9NZ42 101 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 KLK9Q9UKQ9 250 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 PCDH15Q96QU1 1955 aa1.74□□□□□ -2.13
BRCA1-229ENST00000621897 ALKQ9UM73 1620 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 CLASP1Q7Z460 1538 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 H3BRN7 92 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 FXYD1O00168 92 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 ARMS2P0C7Q2 107 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 CCL18P55774 89 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 Q6JHZ5 121 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 C6orf201Q7Z4U5 140 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 PPP1R1CQ8WVI7 109 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 ARL2-SNX15V9GYD0 113 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 NUP188Q5SRE5 1749 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 CRYBG1Q9Y4K1 1723 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 NKTRP30414 1462 aaKnown RBP1.73□□□□□ -2.13
BRCA1-229ENST00000621897 RALGAPBQ86X10 1494 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 CD163L1Q9NR16 1453 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 ZFHX3Q15911 3703 aa1.73□□□□□ -2.13
BRCA1-229ENST00000621897 GLI2P10070 1586 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 MAST1Q9Y2H9 1570 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 CEP170BQ9Y4F5 1589 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-229ENST00000621897 FN1P02751 2386 aaKnown RBP1.72□□□□□ -2.13
BRCA1-229ENST00000621897 SHPRHQ149N8 1683 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 PREX1Q8TCU6 1659 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 PRXQ9BXM0 1461 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 IGKV2-40A0A087WW87 121 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-229ENST00000621897 NBDYA0A0U1RRE5 68 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 IGKV2D-40P01614 121 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-229ENST00000621897 GCHFRP30047 84 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 ATP5EP2Q5VTU8 51 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 HCP5Q6MZN7 132 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 ZNF563Q8TA94 476 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 R4GMQ9 66 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 MUC6Q6W4X9 2439 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 CICQ96RK0 1608 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-229ENST00000621897 FREM1Q5H8C1 2179 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 DOCK10Q96BY6 2186 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 CDC42BPGQ6DT37 1551 aa1.72□□□□□ -2.13
BRCA1-229ENST00000621897 COL4A1P02462 1669 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 F8VRH5 84 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 M0R2N4 97 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 INE1O15225 51 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 DNAL4O96015 105 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 RPL37AP61513 92 aaKnown RBP1.71□□□□□ -2.14
BRCA1-229ENST00000621897 SMIM5Q71RC9 77 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 WFDC10AQ9H1F0 79 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 TMEM14CQ9P0S9 112 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 UBE2D4Q9Y2X8 147 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 LINC01558Q9Y6Z2 57 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 ANKRD50Q9ULJ7 1429 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 PKD1L3Q7Z443 1732 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 SYCP2Q9BX26 1530 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 NHSQ6T4R5 1651 aa1.71□□□□□ -2.14
BRCA1-229ENST00000621897 PAPPAQ13219 1627 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 TRGV4A0A0C4DH28 118 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 LEPROTL1O95214 131 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 LINC00322Q6ZN03 302 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-229ENST00000621897 TTTY12Q9BZ98 90 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 PROK2Q9HC23 129 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 PARP4Q9UKK3 1724 aaKnown RBP1.7□□□□□ -2.14
BRCA1-229ENST00000621897 V9GYV3 84 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 ALS2Q96Q42 1657 aa1.7□□□□□ -2.14
BRCA1-229ENST00000621897 USP32Q8NFA0 1604 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 ATP7BP35670 1465 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 POLR1AO95602 1720 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-229ENST00000621897 TSC2P49815 1807 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 DNAJC13O75165 2243 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 A0A087WTM6 91 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 D6R8Y8 96 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 C3orf79P0CE67 100 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 IFI27P40305 119 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-229ENST00000621897 FXYD3Q14802 87 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 BAGE2Q86Y30 109 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 MUSTN1Q8IVN3 82 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 WFDC6Q9BQY6 131 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 PRR15LQ9BU68 103 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 MROH2AA6NES4 1674 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 COL14A1Q05707 1796 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms