RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 IGLV1-51P01701 117 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 RNASE1P07998 156 aaKnown RBP2.28□□□□□ -2.04
U1.39-201ENST00000621562 IFITM1P13164 125 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 HTN1P15515 57 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 HERVK_113P63121 156 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 DAZ2Q13117 558 aaKnown RBP2.28□□□□□ -2.04
U1.39-201ENST00000621562 KHDC1LQ5JSQ8 128 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 LINC00612Q8N6U2 182 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 DAND5Q8N907 189 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 LINC00308Q8TCZ7 52 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 NTN5Q8WTR8 489 aaPredicted RBP2.28□□□□□ -2.04
U1.39-201ENST00000621562 CLEC2BQ92478 149 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 FAM110AQ9BQ89 295 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 CDC42SE2Q9NRR3 84 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 ERG28Q9UKR5 140 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 C22orf24Q9Y442 160 aa2.28□□□□□ -2.04
U1.39-201ENST00000621562 DNAH8Q96JB1 4490 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 TRBV10-2A0A0K0K1G8 114 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 A0A1W2PRX2 142 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 H3BT86 120 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 H7C423 109 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 KRTAP10-3P60369 221 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 NPC2P61916 151 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 FHL2Q14192 279 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 ATXN8Q156A1 80 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 HIST2H2BCQ6DN03 193 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 SHISA2Q6UWI4 295 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 DAZ4Q86SG3 579 aaKnown RBP2.27□□□□□ -2.05
U1.39-201ENST00000621562 STHQ8IWL8 128 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 C11orf44Q8N8P7 122 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 LINC01006Q8NI28 216 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 C16orf74Q96GX8 76 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 LYSTQ99698 3801 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 OVOL2Q9BRP0 275 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 GEMIN7Q9H840 131 aaKnown RBP2.27□□□□□ -2.05
U1.39-201ENST00000621562 Q9H8V8 135 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 DAZ3Q9NR90 486 aaKnown RBP2.27□□□□□ -2.05
U1.39-201ENST00000621562 YAE1D1Q9NRH1 226 aa2.27□□□□□ -2.05
U1.39-201ENST00000621562 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
U1.39-201ENST00000621562 FLNBO75369 2602 aaKnown RBP2.26□□□□□ -2.05
U1.39-201ENST00000621562 TEX49A0A1B0GTD5 131 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 TRBV6-4A0A1B0GX49 114 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 GAGE12JA6NER3 117 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 H7C2G1 150 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 NHLRC4P0CG21 123 aaPredicted RBP2.26□□□□□ -2.05
U1.39-201ENST00000621562 PLA2G2AP14555 144 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 RPL36AP83881 106 aaKnown RBP2.26□□□□□ -2.05
U1.39-201ENST00000621562 GAGE4Q13068 117 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 GAGE5Q13069 117 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 FAM222AQ5U5X8 452 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 RPL36ALQ969Q0 106 aaKnown RBP2.26□□□□□ -2.05
U1.39-201ENST00000621562 UBE2WQ96B02 151 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 FAM218AQ96MZ4 157 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 TMEM243Q9BU79 118 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 NOP10Q9NPE3 64 aaKnown RBP2.26□□□□□ -2.05
U1.39-201ENST00000621562 DNAH11Q96DT5 4516 aa2.26□□□□□ -2.05
U1.39-201ENST00000621562 IGLV4-60A0A075B6I1 120 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 IGKV2-28A0A075B6P5 120 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 IGHV3OR16-9A0A0B4J2B5 98 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 FAM240AA0A1B0GVK7 77 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 COX7A2LO14548 114 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 CIDEAO60543 219 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 CRLF1O75462 422 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 GAGE7O76087 117 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 IGKV2D-28P01615 120 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 GAGE12FP0CL80 117 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 GAGE12GP0CL81 117 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 GAGE12IP0CL82 117 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 SCGB1C2P0DMR2 95 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 RPL35AP18077 110 aaKnown RBP2.25□□□□□ -2.05
U1.39-201ENST00000621562 HILS1P60008 231 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 CKS1BP61024 79 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 HERV-K104P63124 156 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 Q1RN00 199 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 Q6Q795 121 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 C2orf82Q6UX34 121 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 SDIM1Q6ZPB5 146 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 LINC00337Q8N6G1 96 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 TEX29Q8N6K0 151 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 LINC00482Q8N8I6 264 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 KIR2DL5BQ8NHK3 375 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 SPATA3Q8NHX4 192 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 COX7B2Q8TF08 81 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 X6R8D5 127 aa2.25□□□□□ -2.05
U1.39-201ENST00000621562 A0A087WZ39 114 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 TRBV6-8A0A0A6YYG3 113 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 TRAV8-4A0A0B4J246 113 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 A0A1B0GV72 72 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 TMEM262E9PQX1 116 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 LY6G6DO95868 133 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 TRACP01848 142 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 PRSS2P07478 247 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 RPL28P46779 137 aaKnown RBP2.24□□□□□ -2.05
U1.39-201ENST00000621562 CCL18P55774 89 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
U1.39-201ENST00000621562 GAGE6Q13070 117 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 MRPL23Q16540 153 aaKnown RBP2.24□□□□□ -2.05
U1.39-201ENST00000621562 DGAT2L7PQ6IED9 249 aa2.24□□□□□ -2.05
U1.39-201ENST00000621562 PRIMA1Q86XR5 153 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms