RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 CDC42SE2Q9NRR3 84 aa21.35■■□□□ 1.01
KHSRP-213ENST00000619396 LST1O00453 97 aa21.34■■□□□ 1.01
KHSRP-213ENST00000619396 KRTAP10-3P60369 221 aa21.34■■□□□ 1.01
KHSRP-213ENST00000619396 GAGE12JA6NER3 117 aa21.33■■□□□ 1.01
KHSRP-213ENST00000619396 GAGE4Q13068 117 aa21.33■■□□□ 1.01
KHSRP-213ENST00000619396 GAGE5Q13069 117 aa21.33■■□□□ 1.01
KHSRP-213ENST00000619396 TRAV13-1A0A0B4J241 112 aa21.33■■□□□ 1
KHSRP-213ENST00000619396 C2orf82Q6UX34 121 aa21.33■■□□□ 1
KHSRP-213ENST00000619396 IGLV1-51P01701 117 aa21.32■■□□□ 1
KHSRP-213ENST00000619396 RPL35AP18077 110 aaKnown RBP21.32■■□□□ 1
KHSRP-213ENST00000619396 NOP10Q9NPE3 64 aaKnown RBP21.32■■□□□ 1
KHSRP-213ENST00000619396 F5H768 121 aa21.32■■□□□ 1
KHSRP-213ENST00000619396 ZNF625Q96I27 306 aaPredicted RBP21.32■■□□□ 1
KHSRP-213ENST00000619396 H3BT86 120 aa21.31■■□□□ 1
KHSRP-213ENST00000619396 PLAC8L1A1L4L8 177 aa21.31■■□□□ 1
KHSRP-213ENST00000619396 LY6G6DO95868 133 aa21.31■■□□□ 1
KHSRP-213ENST00000619396 UBE2WQ96B02 151 aa21.3■■□□□ 1
KHSRP-213ENST00000619396 C19orf73Q9NVV2 129 aa21.3■■□□□ 1
KHSRP-213ENST00000619396 OTOGQ6ZRI0 2925 aa21.3■■□□□ 1
KHSRP-213ENST00000619396 CITED1Q99966 193 aa21.29■■□□□ 1
KHSRP-213ENST00000619396 SOSTDC1Q6X4U4 206 aa21.28■■□□□ 1
KHSRP-213ENST00000619396 A0A0U1RRA0 63 aa21.26■□□□□ 0.99
KHSRP-213ENST00000619396 CMC4P56277 68 aaPredicted RBP21.25■□□□□ 0.99
KHSRP-213ENST00000619396 TMEM243Q9BU79 118 aa21.24■□□□□ 0.99
KHSRP-213ENST00000619396 PRIMA1Q86XR5 153 aa21.24■□□□□ 0.99
KHSRP-213ENST00000619396 C16orf74Q96GX8 76 aa21.24■□□□□ 0.99
KHSRP-213ENST00000619396 TRAV8-4A0A0B4J246 113 aa21.23■□□□□ 0.99
KHSRP-213ENST00000619396 COPS9Q8WXC6 57 aa21.21■□□□□ 0.99
KHSRP-213ENST00000619396 LOC100131303A0A0U1RQF7 123 aa21.21■□□□□ 0.99
KHSRP-213ENST00000619396 GAGE7O76087 117 aa21.21■□□□□ 0.99
KHSRP-213ENST00000619396 GAGE12FP0CL80 117 aa21.21■□□□□ 0.99
KHSRP-213ENST00000619396 GAGE12GP0CL81 117 aa21.21■□□□□ 0.99
KHSRP-213ENST00000619396 GAGE12IP0CL82 117 aa21.21■□□□□ 0.99
KHSRP-213ENST00000619396 HERV-K104P63124 156 aa21.2■□□□□ 0.98
KHSRP-213ENST00000619396 FN1P02751 2386 aaKnown RBP21.2■□□□□ 0.98
KHSRP-213ENST00000619396 SHISA2Q6UWI4 295 aa21.2■□□□□ 0.98
KHSRP-213ENST00000619396 CSNK1G2-AS1Q8NCQ2 148 aa21.2■□□□□ 0.98
KHSRP-213ENST00000619396 FAM110AQ9BQ89 295 aa21.2■□□□□ 0.98
KHSRP-213ENST00000619396 OVOL2Q9BRP0 275 aa21.2■□□□□ 0.98
KHSRP-213ENST00000619396 UBE2L6O14933 153 aa21.19■□□□□ 0.98
KHSRP-213ENST00000619396 DEFB121Q5J5C9 76 aa21.19■□□□□ 0.98
KHSRP-213ENST00000619396 MEIG1Q5JSS6 88 aa21.19■□□□□ 0.98
KHSRP-213ENST00000619396 TRGV2A0A075B6R0 118 aa21.19■□□□□ 0.98
KHSRP-213ENST00000619396 TRBV6-4A0A1B0GX49 114 aa21.19■□□□□ 0.98
KHSRP-213ENST00000619396 CRLF1O75462 422 aa21.17■□□□□ 0.98
KHSRP-213ENST00000619396 VWFP04275 2813 aa21.17■□□□□ 0.98
KHSRP-213ENST00000619396 PPDPFQ9H3Y8 114 aa21.17■□□□□ 0.98
KHSRP-213ENST00000619396 COX7A2LO14548 114 aa21.16■□□□□ 0.98
KHSRP-213ENST00000619396 C2CD3Q4AC94 2353 aa21.16■□□□□ 0.98
KHSRP-213ENST00000619396 INAFM1C9JVW0 142 aa21.16■□□□□ 0.98
KHSRP-213ENST00000619396 SPATA3Q8NHX4 192 aa21.15■□□□□ 0.98
KHSRP-213ENST00000619396 SNCGO76070 127 aa21.14■□□□□ 0.97
KHSRP-213ENST00000619396 PF4P02776 101 aa21.13■□□□□ 0.97
KHSRP-213ENST00000619396 LINC00482Q8N8I6 264 aa21.1■□□□□ 0.97
KHSRP-213ENST00000619396 NSD1Q96L73 2696 aaPredicted RBP21.1■□□□□ 0.97
KHSRP-213ENST00000619396 TRAV26-1A0A087WT03 109 aa21.1■□□□□ 0.97
KHSRP-213ENST00000619396 TRGV4A0A0C4DH28 118 aa21.1■□□□□ 0.97
KHSRP-213ENST00000619396 GAGE2BQ13066 116 aa21.09■□□□□ 0.97
KHSRP-213ENST00000619396 FHL2Q14192 279 aa21.09■□□□□ 0.97
KHSRP-213ENST00000619396 GAGE2EQ4V326 116 aa21.09■□□□□ 0.97
KHSRP-213ENST00000619396 C15orf53Q8NAA6 179 aa21.09■□□□□ 0.97
KHSRP-213ENST00000619396 GAGE2DQ9UEU5 116 aa21.09■□□□□ 0.97
KHSRP-213ENST00000619396 GAGE6Q13070 117 aa21.09■□□□□ 0.97
KHSRP-213ENST00000619396 FAM240AA0A1B0GVK7 77 aa21.08■□□□□ 0.96
KHSRP-213ENST00000619396 COX7B2Q8TF08 81 aa21.08■□□□□ 0.96
KHSRP-213ENST00000619396 IGLV4-60A0A075B6I1 120 aa21.06■□□□□ 0.96
KHSRP-213ENST00000619396 TENM1Q9UKZ4 2725 aa21.06■□□□□ 0.96
KHSRP-213ENST00000619396 Q6Q795 121 aa21.06■□□□□ 0.96
KHSRP-213ENST00000619396 ANAPC13Q9BS18 74 aa21.06■□□□□ 0.96
KHSRP-213ENST00000619396 TRBV6-8A0A0A6YYG3 113 aa21.05■□□□□ 0.96
KHSRP-213ENST00000619396 MRPL23Q16540 153 aaKnown RBP21.04■□□□□ 0.96
KHSRP-213ENST00000619396 TRACP01848 142 aa21.02■□□□□ 0.96
KHSRP-213ENST00000619396 NHLRC4P0CG21 123 aaPredicted RBP21.02■□□□□ 0.96
KHSRP-213ENST00000619396 IGHV3OR16-9A0A0B4J2B5 98 aa21.02■□□□□ 0.96
KHSRP-213ENST00000619396 HIVEP1P15822 2718 aa21.02■□□□□ 0.96
KHSRP-213ENST00000619396 MIR7-3HGQ8N6C7 128 aa21.01■□□□□ 0.95
KHSRP-213ENST00000619396 IGKV3OR2-268A0A0C4DH90 116 aa21■□□□□ 0.95
KHSRP-213ENST00000619396 NBEAL2Q6ZNJ1 2754 aa20.99■□□□□ 0.95
KHSRP-213ENST00000619396 FAM218AQ96MZ4 157 aa20.99■□□□□ 0.95
KHSRP-213ENST00000619396 TOMM7Q9P0U1 55 aa20.98■□□□□ 0.95
KHSRP-213ENST00000619396 NDUFV3P56181 108 aaKnown RBP20.98■□□□□ 0.95
KHSRP-213ENST00000619396 FAM222AQ5U5X8 452 aa20.98■□□□□ 0.95
KHSRP-213ENST00000619396 CHCHD5Q9BSY4 110 aa20.98■□□□□ 0.95
KHSRP-213ENST00000619396 TRAV13-2A0A0B4J235 113 aa20.97■□□□□ 0.95
KHSRP-213ENST00000619396 TTC32Q5I0X7 151 aa20.97■□□□□ 0.95
KHSRP-213ENST00000619396 IGKV2-28A0A075B6P5 120 aa20.97■□□□□ 0.95
KHSRP-213ENST00000619396 IGKV2D-28P01615 120 aa20.97■□□□□ 0.95
KHSRP-213ENST00000619396 RPL28P46779 137 aaKnown RBP20.96■□□□□ 0.95
KHSRP-213ENST00000619396 LINC00337Q8N6G1 96 aa20.96■□□□□ 0.95
KHSRP-213ENST00000619396 A0A087WZ39 114 aa20.95■□□□□ 0.94
KHSRP-213ENST00000619396 C22orf24Q9Y442 160 aa20.95■□□□□ 0.94
KHSRP-213ENST00000619396 SND1-IT1Q9HBX3 110 aa20.94■□□□□ 0.94
KHSRP-213ENST00000619396 BAALC-AS2P0C853 105 aa20.93■□□□□ 0.94
KHSRP-213ENST00000619396 CRPP02741 224 aa20.92■□□□□ 0.94
KHSRP-213ENST00000619396 DEFB130BP0DP73 79 aa20.92■□□□□ 0.94
KHSRP-213ENST00000619396 DEFB130AP0DP74 79 aa20.92■□□□□ 0.94
KHSRP-213ENST00000619396 LINC00612Q8N6U2 182 aa20.92■□□□□ 0.94
KHSRP-213ENST00000619396 KIR2DL5BQ8NHK3 375 aa20.92■□□□□ 0.94
KHSRP-213ENST00000619396 LINC00158P58513 81 aa20.91■□□□□ 0.94
KHSRP-213ENST00000619396 TRRAPQ9Y4A5 3859 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms