RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
SYN3-213ENST00000619146 C10orf126Q8N4M7 172 aa6.22□□□□□ -1.41
SYN3-213ENST00000619146 OPRPNQ99935 248 aaPredicted RBP6.22□□□□□ -1.41
SYN3-213ENST00000619146 Q9H8V8 135 aa6.22□□□□□ -1.41
SYN3-213ENST00000619146 H0Y8G0 127 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 IGHV3-30P01768 117 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 IGHV3-33P01772 117 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 IGHV3-30-3P0DP02 117 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 IGHV3-30-5P0DP03 117 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 XGP55808 180 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 SEC11AP67812 179 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 FAM104AQ969W3 186 aa6.21□□□□□ -1.42
SYN3-213ENST00000619146 F8VRH5 84 aa6.2□□□□□ -1.42
SYN3-213ENST00000619146 PLNP26678 52 aa6.2□□□□□ -1.42
SYN3-213ENST00000619146 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
SYN3-213ENST00000619146 PRR34Q9NV39 138 aa6.2□□□□□ -1.42
SYN3-213ENST00000619146 KLK12Q9UKR0 248 aa6.2□□□□□ -1.42
SYN3-213ENST00000619146 CHTOPQ9Y3Y2 248 aaKnown RBP6.2□□□□□ -1.42
SYN3-213ENST00000619146 TRAV13-1A0A0B4J241 112 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 LOC105371267A0A1B0GV96 52 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 CRPP02741 224 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 UBE2D1P51668 147 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 REG3AQ06141 175 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 ODF1Q14990 250 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 SS18Q15532 418 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
SYN3-213ENST00000619146 TTC32Q5I0X7 151 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
SYN3-213ENST00000619146 Q8N3U1 123 aa6.19□□□□□ -1.42
SYN3-213ENST00000619146 GEMIN7Q9H840 131 aaKnown RBP6.19□□□□□ -1.42
SYN3-213ENST00000619146 TRAV8-3A0A0A6YYJ7 113 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 TRAV8-4A0A0B4J246 113 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 LINC00959A0A1B0GUT2 108 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 IBA57-AS1B1ANH7 110 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 J3QL48 77 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 DPM2O94777 84 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 JOSD1Q15040 202 aaPredicted RBP6.18□□□□□ -1.42
SYN3-213ENST00000619146 MIAQ16674 131 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 UBE2WQ96B02 151 aa6.18□□□□□ -1.42
SYN3-213ENST00000619146 MRPL35Q9NZE8 188 aaKnown RBP6.18□□□□□ -1.42
SYN3-213ENST00000619146 IGKV3OR2-268A0A0C4DH90 116 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 IGLC3P0DOY3 106 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 KRTAP10-1P60331 282 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 HERVK_113P63121 156 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 ZC2HC1BQ5TFG8 222 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 FAM19A3Q7Z5A8 133 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 NFE4Q86UQ8 179 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 RMI2Q96E14 147 aa6.17□□□□□ -1.42
SYN3-213ENST00000619146 IGLV4-69A0A075B6H9 119 aa6.16□□□□□ -1.42
SYN3-213ENST00000619146 A0A0J9YXV3 536 aa6.16□□□□□ -1.42
SYN3-213ENST00000619146 IGKCP01834 107 aa6.16□□□□□ -1.42
SYN3-213ENST00000619146 LINC00242Q5T6M2 205 aa6.16□□□□□ -1.42
SYN3-213ENST00000619146 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
SYN3-213ENST00000619146 ENHOQ6UWT2 76 aa6.16□□□□□ -1.42
SYN3-213ENST00000619146 CHAC1Q9BUX1 264 aa6.16□□□□□ -1.42
SYN3-213ENST00000619146 C11orf86A6NJI1 115 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 H3BRM9 83 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 SMIM6P0DI80 62 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 XCL1P47992 114 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 CD164L2Q6UWJ8 174 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
SYN3-213ENST00000619146 PMCHL2Q9BQD1 86 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 C1orf43Q9BWL3 253 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
SYN3-213ENST00000619146 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
SYN3-213ENST00000619146 HSBP1L1C9JCN9 74 aa6.14□□□□□ -1.43
SYN3-213ENST00000619146 PYY3Q5JQD4 70 aa6.14□□□□□ -1.43
SYN3-213ENST00000619146 TMEM170BQ5T4T1 132 aa6.14□□□□□ -1.43
SYN3-213ENST00000619146 LINC00469Q8N7U9 141 aa6.14□□□□□ -1.43
SYN3-213ENST00000619146 TM2D2Q9BX73 214 aa6.14□□□□□ -1.43
SYN3-213ENST00000619146 IGLV10-54A0A075B6I4 117 aa6.13□□□□□ -1.43
SYN3-213ENST00000619146 IGHV3OR16-9A0A0B4J2B5 98 aa6.13□□□□□ -1.43
SYN3-213ENST00000619146 COX7A2LO14548 114 aa6.13□□□□□ -1.43
SYN3-213ENST00000619146 HERVK_113P61574 105 aa6.13□□□□□ -1.43
SYN3-213ENST00000619146 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
SYN3-213ENST00000619146 LINC01561Q8N1V8 128 aa6.13□□□□□ -1.43
SYN3-213ENST00000619146 IGKV2D-24A0A075B6R9 120 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 A0A087WZ39 114 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 GAGE12HA6NDE8 117 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 EREGO14944 169 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 ZNF22P17026 224 aaPredicted RBP6.12□□□□□ -1.43
SYN3-213ENST00000619146 COX6A2Q02221 97 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 FOXI1Q12951 378 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 Q9HAA7 133 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 PGPEP1Q9NXJ5 209 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 CDKN2A-AS1Q9UH64 79 aa6.12□□□□□ -1.43
SYN3-213ENST00000619146 TMEM223A0PJW6 202 aa6.11□□□□□ -1.43
SYN3-213ENST00000619146 APOMO95445 188 aa6.11□□□□□ -1.43
SYN3-213ENST00000619146 MALP21145 153 aa6.11□□□□□ -1.43
SYN3-213ENST00000619146 S100A12P80511 92 aa6.11□□□□□ -1.43
SYN3-213ENST00000619146 VAMP8Q9BV40 100 aa6.11□□□□□ -1.43
SYN3-213ENST00000619146 CFAP161Q6P656 301 aa6.1□□□□□ -1.43
SYN3-213ENST00000619146 KRTAP26-1Q6PEX3 210 aa6.1□□□□□ -1.43
SYN3-213ENST00000619146 C5orf38Q86SI9 138 aa6.1□□□□□ -1.43
SYN3-213ENST00000619146 STPG4Q8N801 248 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms