RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DAND5Q8N907 189 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 DCANP1Q8TF63 244 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 VSIG2Q96IQ7 327 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 TINCRA0A1B0GVN0 87 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 H7C423 109 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 DEFB131AP59861 70 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 AMELXQ99217 191 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 OTOGQ6ZRI0 2925 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 IGHV3OR16-12A0A075B7B8 117 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 F5H768 121 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 C4orf3Q8WVX3 66 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 LST1O00453 97 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 MRPS36P82909 103 aaKnown RBP5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 TMEM61Q8N0U2 210 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 Q9H8V8 135 aa5.1□□□□□ -1.59
SRGAP3-213ENST00000618999 UBE2L6O14933 153 aa5.09□□□□□ -1.59
SRGAP3-213ENST00000618999 C9orf153Q5TBE3 101 aa5.09□□□□□ -1.59
SRGAP3-213ENST00000618999 TRAV13-1A0A0B4J241 112 aa5.09□□□□□ -1.59
SRGAP3-213ENST00000618999 K7EQG2 157 aa5.09□□□□□ -1.59
SRGAP3-213ENST00000618999 PKIGQ9Y2B9 76 aa5.09□□□□□ -1.59
SRGAP3-213ENST00000618999 FAM236AA0A1B0GUQ0 79 aa5.09□□□□□ -1.6
SRGAP3-213ENST00000618999 FAM236BA0A1B0GV22 79 aa5.09□□□□□ -1.6
SRGAP3-213ENST00000618999 HERVK_113P63121 156 aa5.09□□□□□ -1.6
SRGAP3-213ENST00000618999 FAM240AA0A1B0GVK7 77 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 INAFM2P0DMQ5 153 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 PPDPFQ9H3Y8 114 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 TEP1Q99973 2627 aaKnown RBP5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 GAGE2AQ6NT46 116 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 CHCHD5Q9BSY4 110 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 C16orf95Q9H693 158 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 TIMM17BO60830 172 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 CRPP02741 224 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 ADAMTSL4-AS1Q5T5F5 129 aa5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 SETXQ7Z333 2677 aaKnown RBP5.08□□□□□ -1.6
SRGAP3-213ENST00000618999 RPL36AP83881 106 aaKnown RBP5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 RPL36ALQ969Q0 106 aaKnown RBP5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 CDKN2A-AS1Q9UH64 79 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 INSP01308 110 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 BAALC-AS2P0C853 105 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 PROK1P58294 105 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 DNAJC30Q96LL9 226 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 TMEM126AQ9H061 195 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 TOMM7Q9P0U1 55 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 COX7A2LO14548 114 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 NDUFA7O95182 113 aa5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 NSD1Q96L73 2696 aaPredicted RBP5.07□□□□□ -1.6
SRGAP3-213ENST00000618999 NDUFA1O15239 70 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 LINC00467Q9BRT7 94 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 TRGV1A0A0A0MS02 117 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 IGKV3OR2-268A0A0C4DH90 116 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 LINC00643Q86TS7 51 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 UBE2D4Q9Y2X8 147 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 NHLRC4P0CG21 123 aaPredicted RBP5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 LINC00308Q8TCZ7 52 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 OVOL2Q9BRP0 275 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 AKAP9Q99996 3911 aa5.06□□□□□ -1.6
SRGAP3-213ENST00000618999 SMIM9A6NGZ8 99 aa5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 LINC01561Q8N1V8 128 aa5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 ATRQ13535 2644 aa5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 MUC4Q99102 2169 aa5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 TRAV13-2A0A0B4J235 113 aa5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 IMUPQ9GZP8 106 aa5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 NIPBLQ6KC79 2804 aaeCLIP5.05□□□□□ -1.6
SRGAP3-213ENST00000618999 IGHV3-53P01767 116 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 LINC00158P58513 81 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 DAZ2Q13117 558 aaKnown RBP5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 DAZ4Q86SG3 579 aaKnown RBP5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 DAZ3Q9NR90 486 aaKnown RBP5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 DEFB114Q30KQ6 69 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 LITAFQ99732 161 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 EDA2RQ9HAV5 297 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 CSDC2Q9Y534 153 aaKnown RBP5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 LINC00482Q8N8I6 264 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 XCL2Q9UBD3 114 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 V9GYY9 64 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 TRACP01848 142 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 CHCHD7Q9BUK0 85 aa5.04□□□□□ -1.6
SRGAP3-213ENST00000618999 RBMY1BA6NDE4 496 aaKnown RBP5.03□□□□□ -1.6
SRGAP3-213ENST00000618999 RBMY1EA6NEQ0 496 aaKnown RBP5.03□□□□□ -1.6
SRGAP3-213ENST00000618999 ATP5G1P05496 136 aa5.03□□□□□ -1.6
SRGAP3-213ENST00000618999 RBMY1DP0C7P1 496 aaKnown RBP5.03□□□□□ -1.6
SRGAP3-213ENST00000618999 RBMY1A1P0DJD3 496 aaKnown RBP5.03□□□□□ -1.6
SRGAP3-213ENST00000618999 TRBV7-7A0A0K0K1E9 115 aa5.03□□□□□ -1.6
SRGAP3-213ENST00000618999 TRGV2A0A075B6R0 118 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 UQCRQO14949 82 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 PAX4O43316 350 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 PRM2P04554 102 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 PIK3CD-AS1Q5SR53 167 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 TMEM243Q9BU79 118 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 CYSRT1A8MQ03 144 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 KRTAP10-3P60369 221 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 C3orf22Q8N5N4 141 aa5.02□□□□□ -1.61
SRGAP3-213ENST00000618999 Q9HAA7 133 aa5.01□□□□□ -1.61
SRGAP3-213ENST00000618999 ATOX1O00244 68 aa5.01□□□□□ -1.61
SRGAP3-213ENST00000618999 LINC01600Q96MT4 127 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms