RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 LEPROTO15243 131 aa8.26□□□□□ -1.09
PCDHGA9-202ENST00000616887 OPRPNQ99935 248 aaPredicted RBP8.26□□□□□ -1.09
PCDHGA9-202ENST00000616887 TRRAPQ9Y4A5 3859 aa8.26□□□□□ -1.09
PCDHGA9-202ENST00000616887 POLR2KP53803 58 aaKnown RBP8.25□□□□□ -1.09
PCDHGA9-202ENST00000616887 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
PCDHGA9-202ENST00000616887 TENM1Q9UKZ4 2725 aa8.25□□□□□ -1.09
PCDHGA9-202ENST00000616887 A8MTW9 85 aa8.25□□□□□ -1.09
PCDHGA9-202ENST00000616887 COX7CP15954 63 aa8.25□□□□□ -1.09
PCDHGA9-202ENST00000616887 NPC2P61916 151 aa8.25□□□□□ -1.09
PCDHGA9-202ENST00000616887 hADV29S1A0JD25 119 aa8.24□□□□□ -1.09
PCDHGA9-202ENST00000616887 MRAPQ8TCY5 172 aa8.24□□□□□ -1.09
PCDHGA9-202ENST00000616887 TMEM141Q96I45 108 aa8.24□□□□□ -1.09
PCDHGA9-202ENST00000616887 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
PCDHGA9-202ENST00000616887 LST1O00453 97 aa8.24□□□□□ -1.09
PCDHGA9-202ENST00000616887 KRTAP10-3P60369 221 aa8.24□□□□□ -1.09
PCDHGA9-202ENST00000616887 RPS28P62857 69 aaKnown RBP8.24□□□□□ -1.09
PCDHGA9-202ENST00000616887 I3L3M4 83 aa8.23□□□□□ -1.09
PCDHGA9-202ENST00000616887 Q6ZSN1 163 aa8.23□□□□□ -1.09
PCDHGA9-202ENST00000616887 LINC00643Q86TS7 51 aa8.23□□□□□ -1.09
PCDHGA9-202ENST00000616887 KIR2DL5BQ8NHK3 375 aa8.23□□□□□ -1.09
PCDHGA9-202ENST00000616887 CYSTM1Q9H1C7 97 aa8.23□□□□□ -1.09
PCDHGA9-202ENST00000616887 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
PCDHGA9-202ENST00000616887 ACYP1P07311 99 aa8.22□□□□□ -1.09
PCDHGA9-202ENST00000616887 C2orf48Q96LS8 159 aa8.22□□□□□ -1.09
PCDHGA9-202ENST00000616887 NACAE9PAV3 2078 aa8.22□□□□□ -1.09
PCDHGA9-202ENST00000616887 PPP1R17O96001 155 aa8.22□□□□□ -1.09
PCDHGA9-202ENST00000616887 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
PCDHGA9-202ENST00000616887 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
PCDHGA9-202ENST00000616887 CRYGAP11844 174 aa8.21□□□□□ -1.09
PCDHGA9-202ENST00000616887 ADAMTSL4-AS1Q5T5F5 129 aa8.21□□□□□ -1.09
PCDHGA9-202ENST00000616887 STHQ8IWL8 128 aa8.21□□□□□ -1.09
PCDHGA9-202ENST00000616887 TRBV27A0A0K0K1C4 114 aa8.21□□□□□ -1.1
PCDHGA9-202ENST00000616887 C1orf158Q8N1D5 194 aa8.21□□□□□ -1.1
PCDHGA9-202ENST00000616887 SPATA3Q8NHX4 192 aa8.21□□□□□ -1.1
PCDHGA9-202ENST00000616887 A0A0J9YXV3 536 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 VCYO14598 125 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 INSP01308 110 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 TRACP01848 142 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 ATP5G1P05496 136 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 RHOHQ15669 191 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 TRBV6-5A0A0K0K1A5 114 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 HRCT1Q6UXD1 115 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 DPH3Q96FX2 82 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 LITAFQ99732 161 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 SPANXDQ9BXN6 97 aa8.2□□□□□ -1.1
PCDHGA9-202ENST00000616887 RPL35AP18077 110 aaKnown RBP8.19□□□□□ -1.1
PCDHGA9-202ENST00000616887 ZNF415Q09FC8 603 aa8.19□□□□□ -1.1
PCDHGA9-202ENST00000616887 OXLD1Q5BKU9 147 aa8.19□□□□□ -1.1
PCDHGA9-202ENST00000616887 NBEAL2Q6ZNJ1 2754 aa8.19□□□□□ -1.1
PCDHGA9-202ENST00000616887 OXTP01178 125 aa8.18□□□□□ -1.1
PCDHGA9-202ENST00000616887 IGHV3-30-3P0DP02 117 aa8.18□□□□□ -1.1
PCDHGA9-202ENST00000616887 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
PCDHGA9-202ENST00000616887 DSCR8Q96T75 97 aa8.18□□□□□ -1.1
PCDHGA9-202ENST00000616887 ATRQ13535 2644 aa8.18□□□□□ -1.1
PCDHGA9-202ENST00000616887 IGHV3-38A0A0C4DH36 116 aa8.18□□□□□ -1.1
PCDHGA9-202ENST00000616887 GIG44P09565 113 aaPredicted RBP8.18□□□□□ -1.1
PCDHGA9-202ENST00000616887 RS1O15537 224 aa8.17□□□□□ -1.1
PCDHGA9-202ENST00000616887 IGLV1-51P01701 117 aa8.17□□□□□ -1.1
PCDHGA9-202ENST00000616887 TIMM21Q9BVV7 248 aa8.17□□□□□ -1.1
PCDHGA9-202ENST00000616887 IGHV3-53P01767 116 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 CXCL5P42830 114 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 C19orf73Q9NVV2 129 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 SPANXCQ9NY87 97 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 ATOX1O00244 68 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 DAZ2Q13117 558 aaKnown RBP8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 DAZ4Q86SG3 579 aaKnown RBP8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 DAZ3Q9NR90 486 aaKnown RBP8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 TRGV1A0A0A0MS02 117 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 A8MZ25 164 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 SEC61GP60059 68 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 DAND5Q8N907 189 aa8.16□□□□□ -1.1
PCDHGA9-202ENST00000616887 MIAQ16674 131 aa8.15□□□□□ -1.1
PCDHGA9-202ENST00000616887 Q6ZTI0 123 aa8.15□□□□□ -1.1
PCDHGA9-202ENST00000616887 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.1
PCDHGA9-202ENST00000616887 C20orf203Q8NBC4 194 aa8.15□□□□□ -1.1
PCDHGA9-202ENST00000616887 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
PCDHGA9-202ENST00000616887 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
PCDHGA9-202ENST00000616887 TMEM258P61165 79 aa8.14□□□□□ -1.11
PCDHGA9-202ENST00000616887 Q5XG85 94 aa8.14□□□□□ -1.11
PCDHGA9-202ENST00000616887 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
PCDHGA9-202ENST00000616887 TIRAPP58753 221 aa8.14□□□□□ -1.11
PCDHGA9-202ENST00000616887 HIST1H4AP62805 103 aaKnown RBP8.14□□□□□ -1.11
PCDHGA9-202ENST00000616887 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
PCDHGA9-202ENST00000616887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
PCDHGA9-202ENST00000616887 IGKV2-29A2NJV5 120 aaPredicted RBP8.13□□□□□ -1.11
PCDHGA9-202ENST00000616887 IL17DQ8TAD2 202 aa8.13□□□□□ -1.11
PCDHGA9-202ENST00000616887 NOP10Q9NPE3 64 aaKnown RBP8.13□□□□□ -1.11
PCDHGA9-202ENST00000616887 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
PCDHGA9-202ENST00000616887 BEAN1Q3B7T3 259 aa8.12□□□□□ -1.11
PCDHGA9-202ENST00000616887 LINC00467Q9BRT7 94 aa8.12□□□□□ -1.11
PCDHGA9-202ENST00000616887 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
PCDHGA9-202ENST00000616887 RPL18AQ02543 176 aaKnown RBP8.12□□□□□ -1.11
PCDHGA9-202ENST00000616887 PLAC8L1A1L4L8 177 aa8.11□□□□□ -1.11
PCDHGA9-202ENST00000616887 CMC4P56277 68 aaPredicted RBP8.11□□□□□ -1.11
PCDHGA9-202ENST00000616887 LINC00482Q8N8I6 264 aa8.11□□□□□ -1.11
PCDHGA9-202ENST00000616887 CHCHD7Q9BUK0 85 aa8.11□□□□□ -1.11
PCDHGA9-202ENST00000616887 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
PCDHGA9-202ENST00000616887 IGKV3D-7A0A0C4DH55 119 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms