RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ATP6V0E2Q8NHE4 81 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 LRP1BQ9NZR2 4599 aa7.45□□□□□ -1.22
COL4A1-205ENST00000615732 A0A0J9YXV3 536 aa7.44□□□□□ -1.22
COL4A1-205ENST00000615732 A0A0J9YY99 117 aa7.44□□□□□ -1.22
COL4A1-205ENST00000615732 E9PLD3 99 aa7.44□□□□□ -1.22
COL4A1-205ENST00000615732 SIVA1O15304 175 aa7.44□□□□□ -1.22
COL4A1-205ENST00000615732 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
COL4A1-205ENST00000615732 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
COL4A1-205ENST00000615732 HINT1P49773 126 aaPredicted RBP7.43□□□□□ -1.22
COL4A1-205ENST00000615732 GAGE6Q13070 117 aa7.43□□□□□ -1.22
COL4A1-205ENST00000615732 GEMIN7Q9H840 131 aaKnown RBP7.43□□□□□ -1.22
COL4A1-205ENST00000615732 CSDC2Q9Y534 153 aaKnown RBP7.43□□□□□ -1.22
COL4A1-205ENST00000615732 APOBP04114 4563 aaKnown RBP7.43□□□□□ -1.22
COL4A1-205ENST00000615732 ZNF22P17026 224 aaPredicted RBP7.42□□□□□ -1.22
COL4A1-205ENST00000615732 ZNF25P17030 456 aaPredicted RBP7.42□□□□□ -1.22
COL4A1-205ENST00000615732 LGALS3P17931 250 aaKnown RBP7.42□□□□□ -1.22
COL4A1-205ENST00000615732 HSD52Q0P140 79 aa7.42□□□□□ -1.22
COL4A1-205ENST00000615732 C2orf91Q6ZV80 131 aa7.42□□□□□ -1.22
COL4A1-205ENST00000615732 TRAV26-1A0A087WT03 109 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 A0A096LPF7 62 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 MYMXA0A1B0GTQ4 84 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 TMEM223A0PJW6 202 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 UBE2D1P51668 147 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 SEC11AP67812 179 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 COL5A1-AS1Q5SY13 56 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 SH2D6Q7Z4S9 175 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 TTTY13Q9BZ97 58 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 ICOSQ9Y6W8 199 aa7.41□□□□□ -1.22
COL4A1-205ENST00000615732 HERC1Q15751 4861 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 ZNF815PA8K554 130 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 H3BRM9 83 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 LEPROTO15243 131 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
COL4A1-205ENST00000615732 MPV17L2Q567V2 206 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 Q6ZR54 194 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 LINC00469Q8N7U9 141 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 FAM104AQ969W3 186 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 VSIG2Q96IQ7 327 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 HIGD1BQ9P298 99 aa7.4□□□□□ -1.22
COL4A1-205ENST00000615732 TMEM262E9PQX1 116 aa7.39□□□□□ -1.23
COL4A1-205ENST00000615732 TIRAPP58753 221 aa7.39□□□□□ -1.23
COL4A1-205ENST00000615732 HERVK_113P63121 156 aa7.39□□□□□ -1.23
COL4A1-205ENST00000615732 BVES-AS1Q5T3Y7 98 aa7.39□□□□□ -1.23
COL4A1-205ENST00000615732 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
COL4A1-205ENST00000615732 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
COL4A1-205ENST00000615732 IGHV3-64A0A075B6Q5 118 aa7.38□□□□□ -1.23
COL4A1-205ENST00000615732 TRAV13-1A0A0B4J241 112 aa7.38□□□□□ -1.23
COL4A1-205ENST00000615732 J3QQQ9 107 aa7.38□□□□□ -1.23
COL4A1-205ENST00000615732 SCGB1D4Q6XE38 83 aa7.38□□□□□ -1.23
COL4A1-205ENST00000615732 DNAH5Q8TE73 4624 aa7.38□□□□□ -1.23
COL4A1-205ENST00000615732 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
COL4A1-205ENST00000615732 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
COL4A1-205ENST00000615732 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
COL4A1-205ENST00000615732 TAL2Q16559 108 aa7.36□□□□□ -1.23
COL4A1-205ENST00000615732 C1orf134Q5TEV5 83 aa7.36□□□□□ -1.23
COL4A1-205ENST00000615732 ORAOV1Q8WV07 137 aa7.36□□□□□ -1.23
COL4A1-205ENST00000615732 IGLV4-60A0A075B6I1 120 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 IGLV5-45A0A087WSX0 123 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 A0A1B0GV90 55 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 A6NDN8 102 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 GCSHP23434 173 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 TSPEAR-AS2P59090 65 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 LINC00242Q5T6M2 205 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 FAM19A3Q7Z5A8 133 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 HIST1H4GQ99525 98 aa7.35□□□□□ -1.23
COL4A1-205ENST00000615732 H3BNG1 76 aa7.34□□□□□ -1.23
COL4A1-205ENST00000615732 IGHV3-30-3P0DP02 117 aa7.34□□□□□ -1.23
COL4A1-205ENST00000615732 PTTG1IPP53801 180 aa7.34□□□□□ -1.23
COL4A1-205ENST00000615732 RBX1P62877 108 aa7.34□□□□□ -1.23
COL4A1-205ENST00000615732 TNP2Q05952 138 aa7.34□□□□□ -1.23
COL4A1-205ENST00000615732 LELP1Q5T871 98 aa7.34□□□□□ -1.23
COL4A1-205ENST00000615732 CDKN2A-AS1Q9UH64 79 aa7.34□□□□□ -1.23
COL4A1-205ENST00000615732 TRAV8-3A0A0A6YYJ7 113 aa7.33□□□□□ -1.24
COL4A1-205ENST00000615732 A0A1B0GUV1 79 aa7.33□□□□□ -1.24
COL4A1-205ENST00000615732 COX6A2Q02221 97 aa7.33□□□□□ -1.24
COL4A1-205ENST00000615732 CEND1Q8N111 149 aa7.33□□□□□ -1.24
COL4A1-205ENST00000615732 C16orf90A8MZG2 172 aa7.32□□□□□ -1.24
COL4A1-205ENST00000615732 CDK2AP2O75956 126 aa7.32□□□□□ -1.24
COL4A1-205ENST00000615732 SRSF9Q13242 221 aaKnown RBP eCLIP7.32□□□□□ -1.24
COL4A1-205ENST00000615732 SS18Q15532 418 aa7.32□□□□□ -1.24
COL4A1-205ENST00000615732 C15orf53Q8NAA6 179 aa7.32□□□□□ -1.24
COL4A1-205ENST00000615732 NDUFA12Q9UI09 145 aa7.32□□□□□ -1.24
COL4A1-205ENST00000615732 NBDYA0A0U1RRE5 68 aa7.31□□□□□ -1.24
COL4A1-205ENST00000615732 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
COL4A1-205ENST00000615732 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
COL4A1-205ENST00000615732 A6NJY4 79 aa7.3□□□□□ -1.24
COL4A1-205ENST00000615732 TMEM238C9JI98 176 aa7.3□□□□□ -1.24
COL4A1-205ENST00000615732 ANGP03950 147 aaKnown RBP7.3□□□□□ -1.24
COL4A1-205ENST00000615732 CLPSL2Q6UWE3 100 aa7.3□□□□□ -1.24
COL4A1-205ENST00000615732 SPANXB1Q9NS25 103 aaPredicted RBP7.3□□□□□ -1.24
COL4A1-205ENST00000615732 SMIM1B2RUZ4 78 aa7.29□□□□□ -1.24
COL4A1-205ENST00000615732 CCL25O15444 150 aa7.29□□□□□ -1.24
COL4A1-205ENST00000615732 FXYD2P54710 66 aa7.29□□□□□ -1.24
COL4A1-205ENST00000615732 LYPD5Q6UWN5 251 aa7.29□□□□□ -1.24
COL4A1-205ENST00000615732 C6orf223Q8N319 242 aa7.29□□□□□ -1.24
COL4A1-205ENST00000615732 TM2D2Q9BX73 214 aa7.29□□□□□ -1.24
COL4A1-205ENST00000615732 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
COL4A1-205ENST00000615732 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms