RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 SPANXDQ9BXN6 97 aa13.92□□□□□ -0.18
SMARCD2-212ENST00000613943 SPANXCQ9NY87 97 aa13.92□□□□□ -0.18
SMARCD2-212ENST00000613943 DEFB4AO15263 64 aa13.92□□□□□ -0.18
SMARCD2-212ENST00000613943 IGLV4-60A0A075B6I1 120 aa13.91□□□□□ -0.18
SMARCD2-212ENST00000613943 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.91□□□□□ -0.18
SMARCD2-212ENST00000613943 IGLV5-39A0A0G2JS06 123 aa13.91□□□□□ -0.18
SMARCD2-212ENST00000613943 NDUFA1O15239 70 aa13.91□□□□□ -0.18
SMARCD2-212ENST00000613943 GTSF1LQ9H1H1 148 aa13.9□□□□□ -0.18
SMARCD2-212ENST00000613943 LYRM7Q5U5X0 104 aa13.9□□□□□ -0.18
SMARCD2-212ENST00000613943 A0A096LPF7 62 aa13.89□□□□□ -0.19
SMARCD2-212ENST00000613943 F5H768 121 aa13.89□□□□□ -0.19
SMARCD2-212ENST00000613943 TRIAP1O43715 76 aa13.89□□□□□ -0.19
SMARCD2-212ENST00000613943 CHCHD5Q9BSY4 110 aa13.89□□□□□ -0.19
SMARCD2-212ENST00000613943 X6R8D5 127 aa13.89□□□□□ -0.19
SMARCD2-212ENST00000613943 TRBV20-1A0A075B6N2 111 aa13.87□□□□□ -0.19
SMARCD2-212ENST00000613943 TRBV6-8A0A0A6YYG3 113 aa13.87□□□□□ -0.19
SMARCD2-212ENST00000613943 FAM19A3Q7Z5A8 133 aa13.86□□□□□ -0.19
SMARCD2-212ENST00000613943 C9JAW5 83 aa13.86□□□□□ -0.19
SMARCD2-212ENST00000613943 DEFB135Q30KP9 77 aa13.86□□□□□ -0.19
SMARCD2-212ENST00000613943 PRIMA1Q86XR5 153 aa13.86□□□□□ -0.19
SMARCD2-212ENST00000613943 GYPEP15421 78 aa13.85□□□□□ -0.19
SMARCD2-212ENST00000613943 TEP1Q99973 2627 aaKnown RBP13.85□□□□□ -0.19
SMARCD2-212ENST00000613943 FOXI1Q12951 378 aa13.84□□□□□ -0.19
SMARCD2-212ENST00000613943 MEIG1Q5JSS6 88 aa13.84□□□□□ -0.19
SMARCD2-212ENST00000613943 SOSTDC1Q6X4U4 206 aa13.84□□□□□ -0.19
SMARCD2-212ENST00000613943 SVIPQ8NHG7 77 aa13.84□□□□□ -0.19
SMARCD2-212ENST00000613943 LINC00308Q8TCZ7 52 aa13.83□□□□□ -0.2
SMARCD2-212ENST00000613943 TOMM7Q9P0U1 55 aa13.83□□□□□ -0.2
SMARCD2-212ENST00000613943 FAM222AQ5U5X8 452 aa13.82□□□□□ -0.2
SMARCD2-212ENST00000613943 CARD19Q96LW7 228 aa13.82□□□□□ -0.2
SMARCD2-212ENST00000613943 ICOSQ9Y6W8 199 aa13.82□□□□□ -0.2
SMARCD2-212ENST00000613943 TIMM17BO60830 172 aa13.82□□□□□ -0.2
SMARCD2-212ENST00000613943 RPL13AP40429 203 aaKnown RBP13.82□□□□□ -0.2
SMARCD2-212ENST00000613943 ANKRD29Q8N6D5 301 aa13.82□□□□□ -0.2
SMARCD2-212ENST00000613943 GAGE12HA6NDE8 117 aa13.81□□□□□ -0.2
SMARCD2-212ENST00000613943 J3QR89 54 aa13.81□□□□□ -0.2
SMARCD2-212ENST00000613943 CIRBPQ14011 172 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-212ENST00000613943 SLC25A20O43772 301 aa13.81□□□□□ -0.2
SMARCD2-212ENST00000613943 C9orf66Q5T8R8 295 aa13.81□□□□□ -0.2
SMARCD2-212ENST00000613943 CLPSL2Q6UWE3 100 aa13.81□□□□□ -0.2
SMARCD2-212ENST00000613943 KIR2DL5BQ8NHK3 375 aa13.81□□□□□ -0.2
SMARCD2-212ENST00000613943 CIDEAO60543 219 aa13.8□□□□□ -0.2
SMARCD2-212ENST00000613943 CLEC2BQ92478 149 aa13.8□□□□□ -0.2
SMARCD2-212ENST00000613943 SMAGPQ0VAQ4 97 aa13.8□□□□□ -0.2
SMARCD2-212ENST00000613943 TRBV30A0A0K0K1B3 111 aa13.79□□□□□ -0.2
SMARCD2-212ENST00000613943 TEN1Q86WV5 123 aa13.79□□□□□ -0.2
SMARCD2-212ENST00000613943 LINC00612Q8N6U2 182 aa13.79□□□□□ -0.2
SMARCD2-212ENST00000613943 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
SMARCD2-212ENST00000613943 C5orf38Q86SI9 138 aa13.79□□□□□ -0.2
SMARCD2-212ENST00000613943 ATP6V0E2Q8NHE4 81 aa13.79□□□□□ -0.2
SMARCD2-212ENST00000613943 H7C423 109 aa13.78□□□□□ -0.2
SMARCD2-212ENST00000613943 IFITM1P13164 125 aa13.78□□□□□ -0.2
SMARCD2-212ENST00000613943 ATXN8Q156A1 80 aa13.77□□□□□ -0.21
SMARCD2-212ENST00000613943 LINC01620Q4KN68 170 aa13.76□□□□□ -0.21
SMARCD2-212ENST00000613943 Q8N3U1 123 aa13.75□□□□□ -0.21
SMARCD2-212ENST00000613943 COX7B2Q8TF08 81 aa13.75□□□□□ -0.21
SMARCD2-212ENST00000613943 C11orf68Q9H3H3 251 aaKnown RBP13.75□□□□□ -0.21
SMARCD2-212ENST00000613943 IGHV3OR16-9A0A0B4J2B5 98 aa13.75□□□□□ -0.21
SMARCD2-212ENST00000613943 IGHV4-28A0A0C4DH34 117 aa13.74□□□□□ -0.21
SMARCD2-212ENST00000613943 CELA1Q9UNI1 258 aa13.74□□□□□ -0.21
SMARCD2-212ENST00000613943 XCL1P47992 114 aa13.74□□□□□ -0.21
SMARCD2-212ENST00000613943 PPDPFLQ8WWR9 84 aa13.74□□□□□ -0.21
SMARCD2-212ENST00000613943 CITED1Q99966 193 aa13.74□□□□□ -0.21
SMARCD2-212ENST00000613943 SPATA25Q9BR10 227 aa13.74□□□□□ -0.21
SMARCD2-212ENST00000613943 PRO0255Q9UI72 69 aa13.74□□□□□ -0.21
SMARCD2-212ENST00000613943 LINC00959A0A1B0GUT2 108 aa13.72□□□□□ -0.21
SMARCD2-212ENST00000613943 PAX4O43316 350 aa13.72□□□□□ -0.21
SMARCD2-212ENST00000613943 FLNBO75369 2602 aaKnown RBP13.72□□□□□ -0.21
SMARCD2-212ENST00000613943 RNF183Q96D59 192 aa13.72□□□□□ -0.21
SMARCD2-212ENST00000613943 SIGMAR1Q99720 223 aa13.72□□□□□ -0.21
SMARCD2-212ENST00000613943 SMIM9A6NGZ8 99 aa13.71□□□□□ -0.21
SMARCD2-212ENST00000613943 MIR7-3HGQ8N6C7 128 aa13.71□□□□□ -0.21
SMARCD2-212ENST00000613943 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.21
SMARCD2-212ENST00000613943 F8P00451 2351 aa13.7□□□□□ -0.22
SMARCD2-212ENST00000613943 CDIP1Q9H305 208 aa13.7□□□□□ -0.22
SMARCD2-212ENST00000613943 HERV-K104P63124 156 aa13.7□□□□□ -0.22
SMARCD2-212ENST00000613943 COX6CP09669 75 aa13.69□□□□□ -0.22
SMARCD2-212ENST00000613943 TEX49A0A1B0GTD5 131 aa13.69□□□□□ -0.22
SMARCD2-212ENST00000613943 HTN3P15516 51 aa13.69□□□□□ -0.22
SMARCD2-212ENST00000613943 ANK2Q01484 3957 aa13.68□□□□□ -0.22
SMARCD2-212ENST00000613943 A0A087WZ39 114 aa13.68□□□□□ -0.22
SMARCD2-212ENST00000613943 PFN2P35080 140 aa13.68□□□□□ -0.22
SMARCD2-212ENST00000613943 TRAV26-1A0A087WT03 109 aa13.67□□□□□ -0.22
SMARCD2-212ENST00000613943 LYRM9A8MSI8 78 aa13.67□□□□□ -0.22
SMARCD2-212ENST00000613943 APOC4P55056 127 aa13.67□□□□□ -0.22
SMARCD2-212ENST00000613943 LINC00158P58513 81 aa13.67□□□□□ -0.22
SMARCD2-212ENST00000613943 DAD1P61803 113 aa13.67□□□□□ -0.22
SMARCD2-212ENST00000613943 TRBV10-2A0A0K0K1G8 114 aa13.67□□□□□ -0.22
SMARCD2-212ENST00000613943 LST1O00453 97 aa13.66□□□□□ -0.22
SMARCD2-212ENST00000613943 IGHV4-30-4P0DP06 118 aa13.66□□□□□ -0.22
SMARCD2-212ENST00000613943 Q8NAQ8 132 aa13.66□□□□□ -0.22
SMARCD2-212ENST00000613943 IGLV10-54A0A075B6I4 117 aa13.65□□□□□ -0.22
SMARCD2-212ENST00000613943 C2orf82Q6UX34 121 aa13.65□□□□□ -0.22
SMARCD2-212ENST00000613943 LINC00269Q8N2A0 174 aa13.65□□□□□ -0.22
SMARCD2-212ENST00000613943 MT-ATP8P03928 68 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 LINC00337Q8N6G1 96 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 IGKV2-28A0A075B6P5 120 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 A0A1B0GUV1 79 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 IGKV2D-28P01615 120 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 XGP55808 180 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms