RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 IGKV3OR2-268A0A0C4DH90 116 aa9.34□□□□□ -0.91
TMEM254-213ENST00000613758 DNAH10OSP0CZ25 163 aa9.34□□□□□ -0.91
TMEM254-213ENST00000613758 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
TMEM254-213ENST00000613758 COX6A2Q02221 97 aa9.34□□□□□ -0.91
TMEM254-213ENST00000613758 LINC00269Q8N2A0 174 aa9.34□□□□□ -0.91
TMEM254-213ENST00000613758 KLK12Q9UKR0 248 aa9.34□□□□□ -0.91
TMEM254-213ENST00000613758 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
TMEM254-213ENST00000613758 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 LBHQ53QV2 105 aaPredicted RBP9.33□□□□□ -0.92
TMEM254-213ENST00000613758 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 Q9H8V8 135 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 DNAH7Q8WXX0 4024 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 MYMXA0A1B0GTQ4 84 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 BATFQ16520 125 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
TMEM254-213ENST00000613758 DYNC2H1Q8NCM8 4307 aaKnown RBP9.32□□□□□ -0.92
TMEM254-213ENST00000613758 C3orf84H3BNL1 204 aa9.32□□□□□ -0.92
TMEM254-213ENST00000613758 REG3AQ06141 175 aa9.32□□□□□ -0.92
TMEM254-213ENST00000613758 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
TMEM254-213ENST00000613758 LEPROTO15243 131 aa9.31□□□□□ -0.92
TMEM254-213ENST00000613758 BVES-AS1Q5T3Y7 98 aa9.31□□□□□ -0.92
TMEM254-213ENST00000613758 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
TMEM254-213ENST00000613758 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
TMEM254-213ENST00000613758 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
TMEM254-213ENST00000613758 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
TMEM254-213ENST00000613758 CSMD3Q7Z407 3707 aa9.31□□□□□ -0.92
TMEM254-213ENST00000613758 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 J3QQQ9 107 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 ENHOQ6UWT2 76 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 LINC00469Q8N7U9 141 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 HERVK_113P63121 156 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 SS18Q15532 418 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
TMEM254-213ENST00000613758 IGHV1-58A0A0C4DH39 117 aa9.29□□□□□ -0.92
TMEM254-213ENST00000613758 SEC11AP67812 179 aa9.29□□□□□ -0.92
TMEM254-213ENST00000613758 HSD52Q0P140 79 aa9.29□□□□□ -0.92
TMEM254-213ENST00000613758 CRPP02741 224 aa9.29□□□□□ -0.92
TMEM254-213ENST00000613758 SPINK8P0C7L1 97 aa9.29□□□□□ -0.92
TMEM254-213ENST00000613758 CCL25O15444 150 aa9.28□□□□□ -0.92
TMEM254-213ENST00000613758 STARD9Q9P2P6 4700 aa9.28□□□□□ -0.92
TMEM254-213ENST00000613758 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
TMEM254-213ENST00000613758 LGALS3P17931 250 aaKnown RBP9.27□□□□□ -0.93
TMEM254-213ENST00000613758 C10orf126Q8N4M7 172 aa9.27□□□□□ -0.93
TMEM254-213ENST00000613758 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
TMEM254-213ENST00000613758 XCL1P47992 114 aa9.26□□□□□ -0.93
TMEM254-213ENST00000613758 MIAQ16674 131 aa9.26□□□□□ -0.93
TMEM254-213ENST00000613758 COL5A1-AS1Q5SY13 56 aa9.26□□□□□ -0.93
TMEM254-213ENST00000613758 H3BRM9 83 aa9.26□□□□□ -0.93
TMEM254-213ENST00000613758 K7EP13 123 aa9.26□□□□□ -0.93
TMEM254-213ENST00000613758 CHCHD10Q8WYQ3 142 aaPredicted RBP9.26□□□□□ -0.93
TMEM254-213ENST00000613758 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
TMEM254-213ENST00000613758 TRAV8-4A0A0B4J246 113 aa9.25□□□□□ -0.93
TMEM254-213ENST00000613758 IGLV5-39A0A0G2JS06 123 aa9.25□□□□□ -0.93
TMEM254-213ENST00000613758 A0A1B0GV90 55 aa9.25□□□□□ -0.93
TMEM254-213ENST00000613758 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
TMEM254-213ENST00000613758 SMIM1B2RUZ4 78 aa9.24□□□□□ -0.93
TMEM254-213ENST00000613758 ORAOV1Q8WV07 137 aa9.24□□□□□ -0.93
TMEM254-213ENST00000613758 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
TMEM254-213ENST00000613758 CD164L2Q6UWJ8 174 aa9.24□□□□□ -0.93
TMEM254-213ENST00000613758 Q9HAA7 133 aa9.24□□□□□ -0.93
TMEM254-213ENST00000613758 TAL2Q16559 108 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 FXYD2P54710 66 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 C5orf38Q86SI9 138 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 CEND1Q8N111 149 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 TM2D2Q9BX73 214 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 KRTAP1-5Q9BYS1 174 aa9.23□□□□□ -0.93
TMEM254-213ENST00000613758 NBDYA0A0U1RRE5 68 aa9.22□□□□□ -0.93
TMEM254-213ENST00000613758 LY6G6CO95867 125 aa9.22□□□□□ -0.93
TMEM254-213ENST00000613758 GCSHP23434 173 aa9.22□□□□□ -0.93
TMEM254-213ENST00000613758 FOXI1Q12951 378 aa9.22□□□□□ -0.93
TMEM254-213ENST00000613758 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
TMEM254-213ENST00000613758 IGKV2D-24A0A075B6R9 120 aa9.21□□□□□ -0.94
TMEM254-213ENST00000613758 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
TMEM254-213ENST00000613758 TTC32Q5I0X7 151 aa9.21□□□□□ -0.94
TMEM254-213ENST00000613758 HIST1H4GQ99525 98 aa9.21□□□□□ -0.94
TMEM254-213ENST00000613758 NDUFA12Q9UI09 145 aa9.21□□□□□ -0.94
TMEM254-213ENST00000613758 A0A087WZ39 114 aa9.2□□□□□ -0.94
TMEM254-213ENST00000613758 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
TMEM254-213ENST00000613758 Q6ZVH6 145 aa9.2□□□□□ -0.94
TMEM254-213ENST00000613758 LINC00476Q8WZB0 136 aa9.2□□□□□ -0.94
TMEM254-213ENST00000613758 SPANXB1Q9NS25 103 aaPredicted RBP9.2□□□□□ -0.94
TMEM254-213ENST00000613758 COX7A2LO14548 114 aa9.2□□□□□ -0.94
TMEM254-213ENST00000613758 TAX1BP3O14907 124 aa9.2□□□□□ -0.94
TMEM254-213ENST00000613758 RMI2Q96E14 147 aa9.19□□□□□ -0.94
TMEM254-213ENST00000613758 NDUFA1O15239 70 aa9.18□□□□□ -0.94
TMEM254-213ENST00000613758 LITAFQ99732 161 aa9.18□□□□□ -0.94
TMEM254-213ENST00000613758 M0R2N4 97 aa9.17□□□□□ -0.94
TMEM254-213ENST00000613758 MALP21145 153 aa9.17□□□□□ -0.94
TMEM254-213ENST00000613758 LINC01561Q8N1V8 128 aa9.17□□□□□ -0.94
TMEM254-213ENST00000613758 A6NDN8 102 aa9.17□□□□□ -0.94
TMEM254-213ENST00000613758 DNAH1Q9P2D7 4330 aa9.17□□□□□ -0.94
TMEM254-213ENST00000613758 SRSF9Q13242 221 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMEM254-213ENST00000613758 ZNF625Q96I27 306 aaPredicted RBP9.16□□□□□ -0.94
TMEM254-213ENST00000613758 PTTG1IPP53801 180 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms