RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MIAQ16674 131 aa9.94□□□□□ -0.82
PCDHGA3-202ENST00000612467 DAZ4Q86SG3 579 aaKnown RBP9.94□□□□□ -0.82
PCDHGA3-202ENST00000612467 CARD19Q96LW7 228 aa9.94□□□□□ -0.82
PCDHGA3-202ENST00000612467 DAZ3Q9NR90 486 aaKnown RBP9.94□□□□□ -0.82
PCDHGA3-202ENST00000612467 A0A0B4J2C4 111 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 TRBV10-1A0A0K0K1A3 114 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 C9JAW5 83 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 CDIP1Q9H305 208 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 IGLV4-60A0A075B6I1 120 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 TIRAPP58753 221 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 FHL2Q14192 279 aa9.93□□□□□ -0.82
PCDHGA3-202ENST00000612467 TEP1Q99973 2627 aaKnown RBP9.92□□□□□ -0.82
PCDHGA3-202ENST00000612467 UBE2L6O14933 153 aa9.92□□□□□ -0.82
PCDHGA3-202ENST00000612467 FOXI1Q12951 378 aa9.92□□□□□ -0.82
PCDHGA3-202ENST00000612467 TMEM243Q9BU79 118 aa9.92□□□□□ -0.82
PCDHGA3-202ENST00000612467 C1QTNF4Q9BXJ3 329 aa9.92□□□□□ -0.82
PCDHGA3-202ENST00000612467 J3QR89 54 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 HERVK_113P63121 156 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 ANKRD29Q8N6D5 301 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 SPANXCQ9NY87 97 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 SOSTDC1Q6X4U4 206 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 CLEC2BQ92478 149 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 RNF183Q96D59 192 aa9.91□□□□□ -0.82
PCDHGA3-202ENST00000612467 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.9□□□□□ -0.82
PCDHGA3-202ENST00000612467 IGLV5-39A0A0G2JS06 123 aa9.9□□□□□ -0.82
PCDHGA3-202ENST00000612467 F5H768 121 aa9.9□□□□□ -0.82
PCDHGA3-202ENST00000612467 NDUFA1O15239 70 aa9.9□□□□□ -0.82
PCDHGA3-202ENST00000612467 XGP55808 180 aa9.9□□□□□ -0.83
PCDHGA3-202ENST00000612467 OVOL2Q9BRP0 275 aa9.9□□□□□ -0.83
PCDHGA3-202ENST00000612467 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.83
PCDHGA3-202ENST00000612467 CHCHD5Q9BSY4 110 aa9.89□□□□□ -0.83
PCDHGA3-202ENST00000612467 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
PCDHGA3-202ENST00000612467 SLC25A20O43772 301 aa9.89□□□□□ -0.83
PCDHGA3-202ENST00000612467 PRIMA1Q86XR5 153 aa9.89□□□□□ -0.83
PCDHGA3-202ENST00000612467 TRBV20-1A0A075B6N2 111 aa9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 TRBV6-4A0A1B0GX49 114 aa9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 RPL13AP40429 203 aaKnown RBP9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 LYRM7Q5U5X0 104 aa9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 CLPSL2Q6UWE3 100 aa9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 CMC4P56277 68 aaPredicted RBP9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 MEIG1Q5JSS6 88 aa9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 ICOSQ9Y6W8 199 aa9.88□□□□□ -0.83
PCDHGA3-202ENST00000612467 LINC00308Q8TCZ7 52 aa9.87□□□□□ -0.83
PCDHGA3-202ENST00000612467 TEN1Q86WV5 123 aa9.87□□□□□ -0.83
PCDHGA3-202ENST00000612467 CSDC2Q9Y534 153 aaKnown RBP9.87□□□□□ -0.83
PCDHGA3-202ENST00000612467 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
PCDHGA3-202ENST00000612467 X6R8D5 127 aa9.86□□□□□ -0.83
PCDHGA3-202ENST00000612467 TRBV6-8A0A0A6YYG3 113 aa9.86□□□□□ -0.83
PCDHGA3-202ENST00000612467 DEFB135Q30KP9 77 aa9.86□□□□□ -0.83
PCDHGA3-202ENST00000612467 C11orf68Q9H3H3 251 aaKnown RBP9.86□□□□□ -0.83
PCDHGA3-202ENST00000612467 GYPEP15421 78 aa9.85□□□□□ -0.83
PCDHGA3-202ENST00000612467 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
PCDHGA3-202ENST00000612467 Q8N3U1 123 aa9.85□□□□□ -0.83
PCDHGA3-202ENST00000612467 LINC01620Q4KN68 170 aa9.85□□□□□ -0.83
PCDHGA3-202ENST00000612467 FLNBO75369 2602 aaKnown RBP9.84□□□□□ -0.83
PCDHGA3-202ENST00000612467 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.84
PCDHGA3-202ENST00000612467 NTN5Q8WTR8 489 aaPredicted RBP9.84□□□□□ -0.84
PCDHGA3-202ENST00000612467 FAM222AQ5U5X8 452 aa9.83□□□□□ -0.84
PCDHGA3-202ENST00000612467 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
PCDHGA3-202ENST00000612467 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
PCDHGA3-202ENST00000612467 ATXN8Q156A1 80 aa9.83□□□□□ -0.84
PCDHGA3-202ENST00000612467 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
PCDHGA3-202ENST00000612467 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
PCDHGA3-202ENST00000612467 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
PCDHGA3-202ENST00000612467 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
PCDHGA3-202ENST00000612467 TIMM17BO60830 172 aa9.82□□□□□ -0.84
PCDHGA3-202ENST00000612467 B5MCH6 92 aa9.8□□□□□ -0.84
PCDHGA3-202ENST00000612467 H7C423 109 aa9.8□□□□□ -0.84
PCDHGA3-202ENST00000612467 XCL1P47992 114 aa9.8□□□□□ -0.84
PCDHGA3-202ENST00000612467 COX7B2Q8TF08 81 aa9.8□□□□□ -0.84
PCDHGA3-202ENST00000612467 F8P00451 2351 aa9.8□□□□□ -0.84
PCDHGA3-202ENST00000612467 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
PCDHGA3-202ENST00000612467 IFITM1P13164 125 aa9.79□□□□□ -0.84
PCDHGA3-202ENST00000612467 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
PCDHGA3-202ENST00000612467 CELA1Q9UNI1 258 aa9.79□□□□□ -0.84
PCDHGA3-202ENST00000612467 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
PCDHGA3-202ENST00000612467 PFN2P35080 140 aa9.78□□□□□ -0.84
PCDHGA3-202ENST00000612467 KIR2DL5BQ8NHK3 375 aa9.77□□□□□ -0.84
PCDHGA3-202ENST00000612467 ANAPC13Q9BS18 74 aa9.77□□□□□ -0.84
PCDHGA3-202ENST00000612467 NHLRC4P0CG21 123 aaPredicted RBP9.77□□□□□ -0.85
PCDHGA3-202ENST00000612467 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
PCDHGA3-202ENST00000612467 IGLV10-54A0A075B6I4 117 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 TRBV10-2A0A0K0K1G8 114 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 HTN3P15516 51 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 LINC00612Q8N6U2 182 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 STAB1Q9NY15 2570 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 IGHV4-28A0A0C4DH34 117 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 SHISA2Q6UWI4 295 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 ANK2Q01484 3957 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 COX6CP09669 75 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 LINC00158P58513 81 aa9.76□□□□□ -0.85
PCDHGA3-202ENST00000612467 LST1O00453 97 aa9.75□□□□□ -0.85
PCDHGA3-202ENST00000612467 PAX4O43316 350 aa9.75□□□□□ -0.85
PCDHGA3-202ENST00000612467 C9orf66Q5T8R8 295 aa9.75□□□□□ -0.85
PCDHGA3-202ENST00000612467 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
PCDHGA3-202ENST00000612467 FAM218AQ96MZ4 157 aa9.74□□□□□ -0.85
PCDHGA3-202ENST00000612467 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms