RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
EWSR1-221ENST00000610553 HERV-K104P63124 156 aa12.14□□□□□ -0.47
EWSR1-221ENST00000610553 SS18L2Q9UHA2 77 aa12.14□□□□□ -0.47
EWSR1-221ENST00000610553 GAGE12JA6NER3 117 aa12.13□□□□□ -0.47
EWSR1-221ENST00000610553 GAGE7O76087 117 aa12.13□□□□□ -0.47
EWSR1-221ENST00000610553 GAGE12FP0CL80 117 aa12.13□□□□□ -0.47
EWSR1-221ENST00000610553 GAGE12GP0CL81 117 aa12.13□□□□□ -0.47
EWSR1-221ENST00000610553 GAGE12IP0CL82 117 aa12.13□□□□□ -0.47
EWSR1-221ENST00000610553 GAGE4Q13068 117 aa12.13□□□□□ -0.47
EWSR1-221ENST00000610553 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
EWSR1-221ENST00000610553 CCDC179H3BU77 68 aa12.12□□□□□ -0.47
EWSR1-221ENST00000610553 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
EWSR1-221ENST00000610553 Q96MF0 132 aa12.12□□□□□ -0.47
EWSR1-221ENST00000610553 HECTD1Q9ULT8 2610 aa12.12□□□□□ -0.47
EWSR1-221ENST00000610553 ACANP16112 2415 aa12.12□□□□□ -0.47
EWSR1-221ENST00000610553 TRACP01848 142 aa12.11□□□□□ -0.47
EWSR1-221ENST00000610553 PDZD2O15018 2839 aa12.11□□□□□ -0.47
EWSR1-221ENST00000610553 NF1P21359 2839 aa12.1□□□□□ -0.47
EWSR1-221ENST00000610553 ACYP1P07311 99 aa12.1□□□□□ -0.47
EWSR1-221ENST00000610553 TMEM243Q9BU79 118 aa12.09□□□□□ -0.47
EWSR1-221ENST00000610553 PLA2G2AP14555 144 aa12.08□□□□□ -0.48
EWSR1-221ENST00000610553 FAM218AQ96MZ4 157 aa12.08□□□□□ -0.48
EWSR1-221ENST00000610553 KRTAP1-3Q8IUG1 177 aa12.08□□□□□ -0.48
EWSR1-221ENST00000610553 SVIPQ8NHG7 77 aa12.08□□□□□ -0.48
EWSR1-221ENST00000610553 NOP10Q9NPE3 64 aaKnown RBP12.08□□□□□ -0.48
EWSR1-221ENST00000610553 C22orf24Q9Y442 160 aa12.08□□□□□ -0.48
EWSR1-221ENST00000610553 WNK1Q9H4A3 2382 aa12.07□□□□□ -0.48
EWSR1-221ENST00000610553 FASNP49327 2511 aaKnown RBP12.07□□□□□ -0.48
EWSR1-221ENST00000610553 C2CD3Q4AC94 2353 aa12.07□□□□□ -0.48
EWSR1-221ENST00000610553 UBE2L6O14933 153 aa12.07□□□□□ -0.48
EWSR1-221ENST00000610553 PLAC8L1A1L4L8 177 aa12.06□□□□□ -0.48
EWSR1-221ENST00000610553 MTORP42345 2549 aa12.05□□□□□ -0.48
EWSR1-221ENST00000610553 PF4P02776 101 aa12.05□□□□□ -0.48
EWSR1-221ENST00000610553 GIG44P09565 113 aaPredicted RBP12.05□□□□□ -0.48
EWSR1-221ENST00000610553 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
EWSR1-221ENST00000610553 TMEM86BQ8N661 226 aa12.05□□□□□ -0.48
EWSR1-221ENST00000610553 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
EWSR1-221ENST00000610553 SMCR5Q8TEV8 140 aa12.05□□□□□ -0.48
EWSR1-221ENST00000610553 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
EWSR1-221ENST00000610553 NOTCH3Q9UM47 2321 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 TRAV13-2A0A0B4J235 113 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 CCL24O00175 119 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 RPL28P46779 137 aaKnown RBP12.04□□□□□ -0.48
EWSR1-221ENST00000610553 A0A1W2PRX2 142 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 C11orf44Q8N8P7 122 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
EWSR1-221ENST00000610553 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 J3QKU1 62 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 LINC00337Q8N6G1 96 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 CRPP02741 224 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 LRRC75A-AS1Q8N1F1 130 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 MIR7-3HGQ8N6C7 128 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 WFDC11Q8NEX6 87 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 C16orf74Q96GX8 76 aa12.03□□□□□ -0.48
EWSR1-221ENST00000610553 TRBV6-4A0A1B0GX49 114 aa12.02□□□□□ -0.49
EWSR1-221ENST00000610553 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.49
EWSR1-221ENST00000610553 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.49
EWSR1-221ENST00000610553 SETXQ7Z333 2677 aaKnown RBP12.01□□□□□ -0.49
EWSR1-221ENST00000610553 TRGV2A0A075B6R0 118 aa12.01□□□□□ -0.49
EWSR1-221ENST00000610553 LINC00643Q86TS7 51 aa12.01□□□□□ -0.49
EWSR1-221ENST00000610553 DNAJC9-AS1A6NH13 148 aa12□□□□□ -0.49
EWSR1-221ENST00000610553 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
EWSR1-221ENST00000610553 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.49
EWSR1-221ENST00000610553 JMJD1CQ15652 2540 aa12□□□□□ -0.49
EWSR1-221ENST00000610553 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
EWSR1-221ENST00000610553 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
EWSR1-221ENST00000610553 WFDC10AQ9H1F0 79 aa11.99□□□□□ -0.49
EWSR1-221ENST00000610553 Q9HAA7 133 aa11.99□□□□□ -0.49
EWSR1-221ENST00000610553 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
EWSR1-221ENST00000610553 IGLV4-60A0A075B6I1 120 aa11.98□□□□□ -0.49
EWSR1-221ENST00000610553 IGHV3OR16-9A0A0B4J2B5 98 aa11.98□□□□□ -0.49
EWSR1-221ENST00000610553 INAFM2P0DMQ5 153 aa11.98□□□□□ -0.49
EWSR1-221ENST00000610553 OVOL2Q9BRP0 275 aa11.98□□□□□ -0.49
EWSR1-221ENST00000610553 MALP21145 153 aa11.97□□□□□ -0.49
EWSR1-221ENST00000610553 TRBV6-8A0A0A6YYG3 113 aa11.97□□□□□ -0.49
EWSR1-221ENST00000610553 ANK3Q12955 4377 aaKnown RBP11.97□□□□□ -0.49
EWSR1-221ENST00000610553 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
EWSR1-221ENST00000610553 CSNK1G2-AS1Q8NCQ2 148 aa11.96□□□□□ -0.49
EWSR1-221ENST00000610553 SMIM11BQ8TCY0 68 aa11.96□□□□□ -0.49
EWSR1-221ENST00000610553 C19orf73Q9NVV2 129 aa11.96□□□□□ -0.49
EWSR1-221ENST00000610553 TRGV4A0A0C4DH28 118 aa11.95□□□□□ -0.5
EWSR1-221ENST00000610553 CCL18P55774 89 aa11.95□□□□□ -0.5
EWSR1-221ENST00000610553 CMC4P56277 68 aaPredicted RBP11.95□□□□□ -0.5
EWSR1-221ENST00000610553 ESM1Q9NQ30 184 aa11.95□□□□□ -0.5
EWSR1-221ENST00000610553 A0A087WZ39 114 aa11.95□□□□□ -0.5
EWSR1-221ENST00000610553 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
EWSR1-221ENST00000610553 LINC00158P58513 81 aa11.95□□□□□ -0.5
EWSR1-221ENST00000610553 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
EWSR1-221ENST00000610553 A0A087WYN8 130 aa11.94□□□□□ -0.5
EWSR1-221ENST00000610553 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
EWSR1-221ENST00000610553 FHL2Q14192 279 aa11.94□□□□□ -0.5
EWSR1-221ENST00000610553 GAGE2AQ6NT46 116 aa11.93□□□□□ -0.5
EWSR1-221ENST00000610553 DNAL4O96015 105 aa11.92□□□□□ -0.5
EWSR1-221ENST00000610553 IGLV1-51P01701 117 aa11.92□□□□□ -0.5
EWSR1-221ENST00000610553 H0YGX0 51 aa11.91□□□□□ -0.5
EWSR1-221ENST00000610553 CXCL5P42830 114 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms