RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	XCL2	Q9UBD3	114 aa		11.79	□□□□□ -0.52
CAPN12-211	ENST00000601685	USP24	Q9UPU5	2620 aa		11.79	□□□□□ -0.52
CAPN12-211	ENST00000601685	LINC00337	Q8N6G1	96 aa		11.79	□□□□□ -0.52
CAPN12-211	ENST00000601685	DYNLRB2	Q8TF09	96 aa		11.79	□□□□□ -0.52
CAPN12-211	ENST00000601685	CENPE	Q02224	2701 aa		11.78	□□□□□ -0.52
CAPN12-211	ENST00000601685	FAM208B	Q5VWN6	2430 aa		11.78	□□□□□ -0.52
CAPN12-211	ENST00000601685	IGKV2-28	A0A075B6P5	120 aa		11.78	□□□□□ -0.52
CAPN12-211	ENST00000601685	IGKV2D-28	P01615	120 aa		11.78	□□□□□ -0.52
CAPN12-211	ENST00000601685	CFAP161	Q6P656	301 aa		11.78	□□□□□ -0.52
CAPN12-211	ENST00000601685	C1orf158	Q8N1D5	194 aa		11.78	□□□□□ -0.52
CAPN12-211	ENST00000601685	OVOL2	Q9BRP0	275 aa		11.78	□□□□□ -0.52
CAPN12-211	ENST00000601685	COX7C	P15954	63 aa		11.77	□□□□□ -0.52
CAPN12-211	ENST00000601685	HIST1H4A	P62805	103 aa	Known RBP	11.77	□□□□□ -0.52
CAPN12-211	ENST00000601685	DEFB114	Q30KQ6	69 aa		11.77	□□□□□ -0.52
CAPN12-211	ENST00000601685	MIR7-3HG	Q8N6C7	128 aa		11.77	□□□□□ -0.52
CAPN12-211	ENST00000601685	CUBN	O60494	3623 aa		11.77	□□□□□ -0.53
CAPN12-211	ENST00000601685	SND1-IT1	Q9HBX3	110 aa		11.76	□□□□□ -0.53
CAPN12-211	ENST00000601685	C2orf48	Q96LS8	159 aa		11.76	□□□□□ -0.53
CAPN12-211	ENST00000601685	FSHB	P01225	129 aa		11.75	□□□□□ -0.53
CAPN12-211	ENST00000601685	KHDC1L	Q5JSQ8	128 aa		11.75	□□□□□ -0.53
CAPN12-211	ENST00000601685	COX7B2	Q8TF08	81 aa		11.75	□□□□□ -0.53
CAPN12-211	ENST00000601685		A0A087WYN8	130 aa		11.75	□□□□□ -0.53
CAPN12-211	ENST00000601685		Q6ZTI0	123 aa		11.75	□□□□□ -0.53
CAPN12-211	ENST00000601685	SMIM11B	Q8TCY0	68 aa		11.75	□□□□□ -0.53
CAPN12-211	ENST00000601685	MYO9A	B2RTY4	2548 aa		11.75	□□□□□ -0.53
CAPN12-211	ENST00000601685	DNAL4	O96015	105 aa		11.74	□□□□□ -0.53
CAPN12-211	ENST00000601685	TMEM243	Q9BU79	118 aa		11.74	□□□□□ -0.53
CAPN12-211	ENST00000601685	UBE2L6	O14933	153 aa		11.74	□□□□□ -0.53
CAPN12-211	ENST00000601685	IGHV4-31	P0DP07	118 aa		11.74	□□□□□ -0.53
CAPN12-211	ENST00000601685	C4orf3	Q8WVX3	66 aa		11.74	□□□□□ -0.53
CAPN12-211	ENST00000601685	C9orf129	Q5T035	196 aa	Known RBP	11.74	□□□□□ -0.53
CAPN12-211	ENST00000601685	ATOX1	O00244	68 aa		11.73	□□□□□ -0.53
CAPN12-211	ENST00000601685	ODF3L2	Q3SX64	289 aa		11.73	□□□□□ -0.53
CAPN12-211	ENST00000601685	OBSCN-AS1	Q96MR7	158 aa		11.73	□□□□□ -0.53
CAPN12-211	ENST00000601685		H0YGX0	51 aa		11.73	□□□□□ -0.53
CAPN12-211	ENST00000601685	STH	Q8IWL8	128 aa		11.73	□□□□□ -0.53
CAPN12-211	ENST00000601685	PTPN13	Q12923	2485 aa		11.72	□□□□□ -0.53
CAPN12-211	ENST00000601685	CR1	P17927	2039 aa		11.72	□□□□□ -0.53
CAPN12-211	ENST00000601685	CRYGA	P11844	174 aa		11.72	□□□□□ -0.53
CAPN12-211	ENST00000601685	C14orf132	Q9NPU4	83 aa		11.72	□□□□□ -0.53
CAPN12-211	ENST00000601685	TOMM7	Q9P0U1	55 aa		11.72	□□□□□ -0.53
CAPN12-211	ENST00000601685	KLK5	Q9Y337	293 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN12-211	ENST00000601685	TEX15	Q9BXT5	2789 aa		11.71	□□□□□ -0.53
CAPN12-211	ENST00000601685	LINC00158	P58513	81 aa		11.71	□□□□□ -0.53
CAPN12-211	ENST00000601685	CCL18	P55774	89 aa		11.71	□□□□□ -0.54
CAPN12-211	ENST00000601685	LRRC75A-AS1	Q8N1F1	130 aa		11.7	□□□□□ -0.54
CAPN12-211	ENST00000601685		Q6JHZ5	121 aa		11.7	□□□□□ -0.54
CAPN12-211	ENST00000601685	LRRK2	Q5S007	2527 aa		11.69	□□□□□ -0.54
CAPN12-211	ENST00000601685	RPL18A	Q02543	176 aa	Known RBP	11.68	□□□□□ -0.54
CAPN12-211	ENST00000601685	LINC00846	Q9NV44	126 aa		11.68	□□□□□ -0.54
CAPN12-211	ENST00000601685		A0A1B0GX51	115 aa		11.68	□□□□□ -0.54
CAPN12-211	ENST00000601685	PRB1	P04280	392 aa		11.68	□□□□□ -0.54
CAPN12-211	ENST00000601685	KRTAP10-9	P60411	292 aa		11.68	□□□□□ -0.54
CAPN12-211	ENST00000601685	NOP10	Q9NPE3	64 aa	Known RBP	11.68	□□□□□ -0.54
CAPN12-211	ENST00000601685	WNK1	Q9H4A3	2382 aa		11.67	□□□□□ -0.54
CAPN12-211	ENST00000601685	ABCA12	Q86UK0	2595 aa		11.67	□□□□□ -0.54
CAPN12-211	ENST00000601685	NAV2	Q8IVL1	2488 aa		11.67	□□□□□ -0.54
CAPN12-211	ENST00000601685	IGKV3D-7	A0A0C4DH55	119 aa		11.67	□□□□□ -0.54
CAPN12-211	ENST00000601685	IBA57-AS1	B1ANH7	110 aa		11.67	□□□□□ -0.54
CAPN12-211	ENST00000601685	TLN2	Q9Y4G6	2542 aa		11.67	□□□□□ -0.54
CAPN12-211	ENST00000601685	LECT2	O14960	151 aa		11.67	□□□□□ -0.54
CAPN12-211	ENST00000601685	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.66	□□□□□ -0.54
CAPN12-211	ENST00000601685	TRAV25	A0A0B4J276	109 aa		11.66	□□□□□ -0.54
CAPN12-211	ENST00000601685	LOC100131303	A0A0U1RQF7	123 aa		11.66	□□□□□ -0.54
CAPN12-211	ENST00000601685	LOC107984640	A0A0U1RRK4	108 aa		11.66	□□□□□ -0.54
CAPN12-211	ENST00000601685	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.66	□□□□□ -0.54
CAPN12-211	ENST00000601685	IGKV3OR2-268	A0A0C4DH90	116 aa		11.66	□□□□□ -0.54
CAPN12-211	ENST00000601685	ZNF462	Q96JM2	2506 aa		11.65	□□□□□ -0.54
CAPN12-211	ENST00000601685		J3KT08	172 aa		11.65	□□□□□ -0.54
CAPN12-211	ENST00000601685	hADV29S1	A0JD25	119 aa		11.65	□□□□□ -0.55
CAPN12-211	ENST00000601685	CHD6	Q8TD26	2715 aa		11.64	□□□□□ -0.55
CAPN12-211	ENST00000601685	IGLV4-60	A0A075B6I1	120 aa		11.64	□□□□□ -0.55
CAPN12-211	ENST00000601685	NOTCH3	Q9UM47	2321 aa		11.64	□□□□□ -0.55
CAPN12-211	ENST00000601685	NCR3	O14931	201 aa		11.64	□□□□□ -0.55
CAPN12-211	ENST00000601685	TRBV6-4	A0A1B0GX49	114 aa		11.63	□□□□□ -0.55
CAPN12-211	ENST00000601685	PFN2	P35080	140 aa		11.63	□□□□□ -0.55
CAPN12-211	ENST00000601685		A0A087WZ39	114 aa		11.63	□□□□□ -0.55
CAPN12-211	ENST00000601685	PAX4	O43316	350 aa		11.63	□□□□□ -0.55
CAPN12-211	ENST00000601685	C11orf44	Q8N8P7	122 aa		11.63	□□□□□ -0.55
CAPN12-211	ENST00000601685	BBC3	Q96PG8	261 aa	Predicted RBP	11.63	□□□□□ -0.55
CAPN12-211	ENST00000601685	OR13C6P	Q8NH95	151 aa		11.62	□□□□□ -0.55
CAPN12-211	ENST00000601685	SON	P18583	2426 aa	Known RBP	11.62	□□□□□ -0.55
CAPN12-211	ENST00000601685	PLAC8L1	A1L4L8	177 aa		11.62	□□□□□ -0.55
CAPN12-211	ENST00000601685	SLPI	P03973	132 aa		11.62	□□□□□ -0.55
CAPN12-211	ENST00000601685	CYSTM1	Q9H1C7	97 aa		11.62	□□□□□ -0.55
CAPN12-211	ENST00000601685	TRGV2	A0A075B6R0	118 aa		11.61	□□□□□ -0.55
CAPN12-211	ENST00000601685	LY6G6D	O95868	133 aa		11.61	□□□□□ -0.55
CAPN12-211	ENST00000601685	RPS28	P62857	69 aa	Known RBP	11.61	□□□□□ -0.55
CAPN12-211	ENST00000601685	SERP2	Q8N6R1	65 aa		11.61	□□□□□ -0.55
CAPN12-211	ENST00000601685		A0A087WVE0	104 aa		11.61	□□□□□ -0.55
CAPN12-211	ENST00000601685	LINC01561	Q8N1V8	128 aa		11.61	□□□□□ -0.55
CAPN12-211	ENST00000601685		A0A1W2PRX2	142 aa		11.6	□□□□□ -0.55
CAPN12-211	ENST00000601685	DEFB113	Q30KQ7	82 aa		11.6	□□□□□ -0.55
CAPN12-211	ENST00000601685	ORMDL1	Q9P0S3	153 aa		11.6	□□□□□ -0.55
CAPN12-211	ENST00000601685	TRBV6-8	A0A0A6YYG3	113 aa		11.6	□□□□□ -0.55
CAPN12-211	ENST00000601685	C16orf74	Q96GX8	76 aa		11.6	□□□□□ -0.55
CAPN12-211	ENST00000601685	AKAP9	Q99996	3911 aa		11.59	□□□□□ -0.55
CAPN12-211	ENST00000601685	GIG44	P09565	113 aa	Predicted RBP	11.59	□□□□□ -0.55
CAPN12-211	ENST00000601685	SS18	Q15532	418 aa		11.59	□□□□□ -0.55
CAPN12-211	ENST00000601685	UPK3B	Q9BT76	320 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms