RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 HIGD1BQ9P298 99 aa9.38□□□□□ -0.91
IRF3-229ENST00000601373 STAB2Q8WWQ8 2551 aa9.38□□□□□ -0.91
IRF3-229ENST00000601373 LINC00959A0A1B0GUT2 108 aa9.37□□□□□ -0.91
IRF3-229ENST00000601373 A0A1B0GV90 55 aa9.37□□□□□ -0.91
IRF3-229ENST00000601373 IGLL5B9A064 214 aa9.37□□□□□ -0.91
IRF3-229ENST00000601373 ANGP03950 147 aaKnown RBP9.37□□□□□ -0.91
IRF3-229ENST00000601373 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
IRF3-229ENST00000601373 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
IRF3-229ENST00000601373 IGKV3OR2-268A0A0C4DH90 116 aa9.36□□□□□ -0.91
IRF3-229ENST00000601373 COX6A2Q02221 97 aa9.36□□□□□ -0.91
IRF3-229ENST00000601373 HSD52Q0P140 79 aa9.36□□□□□ -0.91
IRF3-229ENST00000601373 MUC7Q8TAX7 377 aa9.36□□□□□ -0.91
IRF3-229ENST00000601373 MYMXA0A1B0GTQ4 84 aa9.35□□□□□ -0.91
IRF3-229ENST00000601373 A6NDN8 102 aa9.35□□□□□ -0.91
IRF3-229ENST00000601373 J3QQQ9 107 aa9.35□□□□□ -0.91
IRF3-229ENST00000601373 LGALS3P17931 250 aaKnown RBP9.35□□□□□ -0.91
IRF3-229ENST00000601373 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
IRF3-229ENST00000601373 CCL18P55774 89 aa9.35□□□□□ -0.91
IRF3-229ENST00000601373 REG3AQ06141 175 aa9.35□□□□□ -0.91
IRF3-229ENST00000601373 CASC10Q5T4H9 136 aa9.35□□□□□ -0.91
IRF3-229ENST00000601373 LINC00269Q8N2A0 174 aa9.35□□□□□ -0.91
IRF3-229ENST00000601373 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
IRF3-229ENST00000601373 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
IRF3-229ENST00000601373 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
IRF3-229ENST00000601373 MAPKAPK5-AS1Q8N8E1 139 aa9.34□□□□□ -0.91
IRF3-229ENST00000601373 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 SPINK8P0C7L1 97 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 TAL2Q16559 108 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 LINC01556Q5JQF7 62 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 LYSTQ99698 3801 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 PRR34Q9NV39 138 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 KLK12Q9UKR0 248 aa9.33□□□□□ -0.92
IRF3-229ENST00000601373 TENM2Q9NT68 2774 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 IGHV3-30P01768 117 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 IGHV3-33P01772 117 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 IGHV3-30-5P0DP03 117 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 BVES-AS1Q5T3Y7 98 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 C2orf91Q6ZV80 131 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 ORAOV1Q8WV07 137 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 TTTY13Q9BZ97 58 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 KLK5Q9Y337 293 aaPredicted RBP9.32□□□□□ -0.92
IRF3-229ENST00000601373 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
IRF3-229ENST00000601373 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 A0A087WZ39 114 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 TRAV8-3A0A0A6YYJ7 113 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 LCE6AA0A183 80 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 CRPP02741 224 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 CLPSL2Q6UWE3 100 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 Q8N3U1 123 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 LINC00588Q9Y4M8 146 aa9.31□□□□□ -0.92
IRF3-229ENST00000601373 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
IRF3-229ENST00000601373 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
IRF3-229ENST00000601373 XCL1P47992 114 aa9.3□□□□□ -0.92
IRF3-229ENST00000601373 TSPEAR-AS2P59090 65 aa9.3□□□□□ -0.92
IRF3-229ENST00000601373 CHCHD10Q8WYQ3 142 aaPredicted RBP9.3□□□□□ -0.92
IRF3-229ENST00000601373 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
IRF3-229ENST00000601373 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
IRF3-229ENST00000601373 APLNQ9ULZ1 77 aa9.3□□□□□ -0.92
IRF3-229ENST00000601373 MIAQ16674 131 aa9.29□□□□□ -0.92
IRF3-229ENST00000601373 ZFAND6Q6FIF0 208 aa9.29□□□□□ -0.92
IRF3-229ENST00000601373 SCGB1D4Q6XE38 83 aa9.29□□□□□ -0.92
IRF3-229ENST00000601373 RYR2Q92736 4967 aa9.29□□□□□ -0.92
IRF3-229ENST00000601373 ENHOQ6UWT2 76 aa9.28□□□□□ -0.92
IRF3-229ENST00000601373 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
IRF3-229ENST00000601373 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
IRF3-229ENST00000601373 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
IRF3-229ENST00000601373 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
IRF3-229ENST00000601373 BIRC6Q9NR09 4857 aa9.27□□□□□ -0.93
IRF3-229ENST00000601373 K7EP13 123 aa9.26□□□□□ -0.93
IRF3-229ENST00000601373 COX7A2LO14548 114 aa9.26□□□□□ -0.93
IRF3-229ENST00000601373 NDUFA1O15239 70 aa9.26□□□□□ -0.93
IRF3-229ENST00000601373 EPPK1P58107 5090 aaKnown RBP9.26□□□□□ -0.93
IRF3-229ENST00000601373 IGLV10-54A0A075B6I4 117 aa9.25□□□□□ -0.93
IRF3-229ENST00000601373 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
IRF3-229ENST00000601373 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
IRF3-229ENST00000601373 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
IRF3-229ENST00000601373 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
IRF3-229ENST00000601373 TMEM238LA0A1B0GVL6 79 aa9.24□□□□□ -0.93
IRF3-229ENST00000601373 A6NJY4 79 aa9.24□□□□□ -0.93
IRF3-229ENST00000601373 APOMO95445 188 aa9.24□□□□□ -0.93
IRF3-229ENST00000601373 MALP21145 153 aa9.24□□□□□ -0.93
IRF3-229ENST00000601373 HERV-K104P63124 156 aa9.24□□□□□ -0.93
IRF3-229ENST00000601373 FOXI1Q12951 378 aa9.24□□□□□ -0.93
IRF3-229ENST00000601373 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
IRF3-229ENST00000601373 A0A0J9YXY3 114 aa9.23□□□□□ -0.93
IRF3-229ENST00000601373 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
IRF3-229ENST00000601373 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
IRF3-229ENST00000601373 TM2D2Q9BX73 214 aa9.23□□□□□ -0.93
IRF3-229ENST00000601373 Q9H8V8 135 aa9.23□□□□□ -0.93
IRF3-229ENST00000601373 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
IRF3-229ENST00000601373 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 TIMM17BO60830 172 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 PRSS2P07478 247 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms