RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CRPP02741 224 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 COX6A2Q02221 97 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 DGAT2L7PQ6IED9 249 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 FA2HQ7L5A8 372 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 ERASQ7Z444 233 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 FAM19A3Q7Z5A8 133 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 TIMM17AQ99595 171 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 C1orf43Q9BWL3 253 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 COX11Q9Y6N1 276 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 LRP1BQ9NZR2 4599 aa6.92□□□□□ -1.3
LIG1-210ENST00000596332 CCL25O15444 150 aa6.91□□□□□ -1.3
LIG1-210ENST00000596332 SLPIP03973 132 aa6.91□□□□□ -1.3
LIG1-210ENST00000596332 PRSS1P07477 247 aa6.91□□□□□ -1.3
LIG1-210ENST00000596332 NPSP0C0P6 89 aa6.91□□□□□ -1.3
LIG1-210ENST00000596332 Q8N814 137 aa6.91□□□□□ -1.3
LIG1-210ENST00000596332 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
LIG1-210ENST00000596332 RMI2Q96E14 147 aa6.91□□□□□ -1.3
LIG1-210ENST00000596332 TRAV13-1A0A0B4J241 112 aa6.9□□□□□ -1.3
LIG1-210ENST00000596332 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
LIG1-210ENST00000596332 SERF1AO75920 110 aa6.9□□□□□ -1.3
LIG1-210ENST00000596332 UBE2D1P51668 147 aa6.9□□□□□ -1.3
LIG1-210ENST00000596332 LINC00242Q5T6M2 205 aa6.9□□□□□ -1.3
LIG1-210ENST00000596332 CHCHD1Q96BP2 118 aaKnown RBP6.9□□□□□ -1.3
LIG1-210ENST00000596332 TMEM141Q96I45 108 aa6.9□□□□□ -1.3
LIG1-210ENST00000596332 C14orf144Q96I85 54 aa6.9□□□□□ -1.3
LIG1-210ENST00000596332 USP17L23D6RBM5 183 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 PSCAO43653 123 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 XCL1P47992 114 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 SPATA12Q7Z6I5 190 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 FAM19A2Q8N3H0 131 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 SCGB3A1Q96QR1 104 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 C2orf88Q9BSF0 95 aa6.89□□□□□ -1.31
LIG1-210ENST00000596332 HBDP02042 147 aa6.88□□□□□ -1.31
LIG1-210ENST00000596332 SMAGPQ0VAQ4 97 aa6.88□□□□□ -1.31
LIG1-210ENST00000596332 SS18Q15532 418 aa6.88□□□□□ -1.31
LIG1-210ENST00000596332 CST9LQ9H4G1 147 aa6.88□□□□□ -1.31
LIG1-210ENST00000596332 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
LIG1-210ENST00000596332 SCGB1D1O95968 90 aa6.87□□□□□ -1.31
LIG1-210ENST00000596332 G0S2P27469 103 aa6.87□□□□□ -1.31
LIG1-210ENST00000596332 BAGE3Q86Y29 109 aa6.87□□□□□ -1.31
LIG1-210ENST00000596332 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
LIG1-210ENST00000596332 PRO1933Q9H354 126 aa6.87□□□□□ -1.31
LIG1-210ENST00000596332 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
LIG1-210ENST00000596332 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
LIG1-210ENST00000596332 KRTAP10-1P60331 282 aa6.86□□□□□ -1.31
LIG1-210ENST00000596332 CDPF1Q6NVV7 123 aa6.86□□□□□ -1.31
LIG1-210ENST00000596332 TEX43Q6ZNM6 134 aa6.86□□□□□ -1.31
LIG1-210ENST00000596332 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
LIG1-210ENST00000596332 VCX2Q9H322 139 aa6.86□□□□□ -1.31
LIG1-210ENST00000596332 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
LIG1-210ENST00000596332 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
LIG1-210ENST00000596332 GVQW2A0A096LPI5 108 aaPredicted RBP6.85□□□□□ -1.31
LIG1-210ENST00000596332 M0R143 59 aa6.85□□□□□ -1.31
LIG1-210ENST00000596332 IGLV4-69A0A075B6H9 119 aa6.84□□□□□ -1.31
LIG1-210ENST00000596332 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.84□□□□□ -1.31
LIG1-210ENST00000596332 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.31
LIG1-210ENST00000596332 A0A087WZ39 114 aa6.84□□□□□ -1.31
LIG1-210ENST00000596332 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
LIG1-210ENST00000596332 KIAA0087Q14695 138 aa6.84□□□□□ -1.31
LIG1-210ENST00000596332 PMVKQ15126 192 aa6.84□□□□□ -1.31
LIG1-210ENST00000596332 LINC01620Q4KN68 170 aa6.84□□□□□ -1.31
LIG1-210ENST00000596332 LINC00526Q96FQ7 95 aa6.84□□□□□ -1.31
LIG1-210ENST00000596332 HSBP1O75506 76 aa6.83□□□□□ -1.32
LIG1-210ENST00000596332 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
LIG1-210ENST00000596332 FAM30AQ9NZY2 134 aa6.83□□□□□ -1.32
LIG1-210ENST00000596332 CDKN2A-AS1Q9UH64 79 aa6.83□□□□□ -1.32
LIG1-210ENST00000596332 RYR1P21817 5038 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 TINCRA0A1B0GVN0 87 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 COX7A2LO14548 114 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 ATP5LO75964 103 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 HIGD2BQ4VC39 106 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 Q6ZN92 141 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
LIG1-210ENST00000596332 IGLV5-52A0A0A0MRZ9 124 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 TRAV12-1A0A0B4J245 112 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 hDV102S1A0JD36 115 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 EREGO14944 169 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 IGLC3P0DOY3 106 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 LINC01561Q8N1V8 128 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 IFI27L1Q96BM0 104 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 MIEN1Q9BRT3 115 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 VAMP8Q9BV40 100 aa6.81□□□□□ -1.32
LIG1-210ENST00000596332 A0A1B0GV90 55 aa6.8□□□□□ -1.32
LIG1-210ENST00000596332 C11orf86A6NJI1 115 aa6.8□□□□□ -1.32
LIG1-210ENST00000596332 C16orf90A8MZG2 172 aa6.8□□□□□ -1.32
LIG1-210ENST00000596332 GCSHP23434 173 aa6.8□□□□□ -1.32
LIG1-210ENST00000596332 XGP55808 180 aa6.8□□□□□ -1.32
LIG1-210ENST00000596332 C14orf177Q52M58 125 aa6.8□□□□□ -1.32
LIG1-210ENST00000596332 Q6ZSA8 131 aa6.8□□□□□ -1.32
LIG1-210ENST00000596332 HERC2O95714 4834 aa6.79□□□□□ -1.32
LIG1-210ENST00000596332 C20orf202A1L168 122 aa6.79□□□□□ -1.32
LIG1-210ENST00000596332 SMIM1B2RUZ4 78 aa6.79□□□□□ -1.32
LIG1-210ENST00000596332 PANO1I0J062 215 aa6.79□□□□□ -1.32
LIG1-210ENST00000596332 LCE2BO14633 110 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms